RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 HNRNPA0Q13151 305 aaKnown RBP21.94■■□□□ 1.1
NDEL1-201ENST00000334527 RPE65Q16518 533 aa21.94■■□□□ 1.1
NDEL1-201ENST00000334527 NRARPQ7Z6K4 114 aa21.94■■□□□ 1.1
NDEL1-201ENST00000334527 SETD6Q8TBK2 473 aa21.94■■□□□ 1.1
NDEL1-201ENST00000334527 GANCQ8TET4 914 aa21.94■■□□□ 1.1
NDEL1-201ENST00000334527 GATAD2BQ8WXI9 593 aa21.94■■□□□ 1.1
NDEL1-201ENST00000334527 KAT2AQ92830 837 aa21.94■■□□□ 1.1
NDEL1-201ENST00000334527 FAM46AQ96IP4 442 aaKnown RBP21.94■■□□□ 1.1
NDEL1-201ENST00000334527 FGF20Q9NP95 211 aaPredicted RBP21.94■■□□□ 1.1
NDEL1-201ENST00000334527 SLC17A4Q9Y2C5 497 aa21.94■■□□□ 1.1
NDEL1-201ENST00000334527 MDC1Q14676 2089 aaKnown RBP21.94■■□□□ 1.1
NDEL1-201ENST00000334527 SNTNA6NMZ2 147 aa21.94■■□□□ 1.1
NDEL1-201ENST00000334527 MSL3P1P0C860 447 aa21.94■■□□□ 1.1
NDEL1-201ENST00000334527 MTNR1AP48039 350 aa21.94■■□□□ 1.1
NDEL1-201ENST00000334527 TSPAN31Q12999 210 aa21.94■■□□□ 1.1
NDEL1-201ENST00000334527 LTB4RQ15722 352 aa21.94■■□□□ 1.1
NDEL1-201ENST00000334527 CLEC12AQ5QGZ9 265 aa21.94■■□□□ 1.1
NDEL1-201ENST00000334527 C16orf62Q7Z3J2 963 aa21.94■■□□□ 1.1
NDEL1-201ENST00000334527 SRFBP1Q8NEF9 429 aaKnown RBP21.94■■□□□ 1.1
NDEL1-201ENST00000334527 ANKK1Q8NFD2 765 aa21.94■■□□□ 1.1
NDEL1-201ENST00000334527 TM9SF4Q92544 642 aa21.94■■□□□ 1.1
NDEL1-201ENST00000334527 DIO2Q92813 273 aa21.94■■□□□ 1.1
NDEL1-201ENST00000334527 SLC38A2Q96QD8 506 aa21.94■■□□□ 1.1
NDEL1-201ENST00000334527 ITGB1BP2Q9UKP3 347 aa21.94■■□□□ 1.1
NDEL1-201ENST00000334527 RBMX2Q9Y388 322 aaKnown RBP21.94■■□□□ 1.1
NDEL1-201ENST00000334527 IRGMA1A4Y4 181 aa21.93■■□□□ 1.1
NDEL1-201ENST00000334527 SLC35F4A4IF30 521 aa21.93■■□□□ 1.1
NDEL1-201ENST00000334527 ASGR2P07307 311 aa21.93■■□□□ 1.1
NDEL1-201ENST00000334527 CMPK1P30085 196 aa21.93■■□□□ 1.1
NDEL1-201ENST00000334527 AVPR1BP47901 424 aa21.93■■□□□ 1.1
NDEL1-201ENST00000334527 NKX2-5P52952 324 aaPredicted RBP21.93■■□□□ 1.1
NDEL1-201ENST00000334527 OR2B6P58173 313 aa21.93■■□□□ 1.1
NDEL1-201ENST00000334527 RPS25P62851 125 aaKnown RBP21.93■■□□□ 1.1
NDEL1-201ENST00000334527 RPS21P63220 83 aaKnown RBP21.93■■□□□ 1.1
NDEL1-201ENST00000334527 HOXC5Q00444 222 aa21.93■■□□□ 1.1
NDEL1-201ENST00000334527 BAK1Q16611 211 aa21.93■■□□□ 1.1
NDEL1-201ENST00000334527 AGAP6Q5VW22 663 aa21.93■■□□□ 1.1
NDEL1-201ENST00000334527 RRM2BQ7LG56 351 aa21.93■■□□□ 1.1
NDEL1-201ENST00000334527 SHFQ7M4L6 423 aa21.93■■□□□ 1.1
NDEL1-201ENST00000334527 MRGPREQ86SM8 312 aa21.93■■□□□ 1.1
NDEL1-201ENST00000334527 MFSD9Q8NBP5 474 aa21.93■■□□□ 1.1
NDEL1-201ENST00000334527 HERVK_113Q902F9 699 aa21.93■■□□□ 1.1
NDEL1-201ENST00000334527 AGAP4Q96P64 663 aa21.93■■□□□ 1.1
NDEL1-201ENST00000334527 SRRQ9GZT4 340 aa21.93■■□□□ 1.1
NDEL1-201ENST00000334527 HOXD1Q9GZZ0 328 aa21.93■■□□□ 1.1
NDEL1-201ENST00000334527 RMI1Q9H9A7 625 aa21.93■■□□□ 1.1
NDEL1-201ENST00000334527 TRPV4Q9HBA0 871 aa21.93■■□□□ 1.1
NDEL1-201ENST00000334527 GDE1Q9NZC3 331 aa21.93■■□□□ 1.1
NDEL1-201ENST00000334527 ZNF780BQ9Y6R6 833 aa21.93■■□□□ 1.1
NDEL1-201ENST00000334527 TMEM129A0AVI4 362 aa21.92■■□□□ 1.1
NDEL1-201ENST00000334527 PRR19A6NJB7 356 aa21.92■■□□□ 1.1
NDEL1-201ENST00000334527 TRHRP34981 398 aaPredicted RBP21.92■■□□□ 1.1
NDEL1-201ENST00000334527 SOX9P48436 509 aa21.92■■□□□ 1.1
NDEL1-201ENST00000334527 ARFIP1P53367 373 aa21.92■■□□□ 1.1
NDEL1-201ENST00000334527 COL9A2Q14055 689 aaPredicted RBP21.92■■□□□ 1.1
NDEL1-201ENST00000334527 PLK5Q496M5 336 aa21.92■■□□□ 1.1
NDEL1-201ENST00000334527 MINDY4Q4G0A6 757 aa21.92■■□□□ 1.1
NDEL1-201ENST00000334527 ARMC4Q5T2S8 1044 aa21.92■■□□□ 1.1
NDEL1-201ENST00000334527 GALNT6Q8NCL4 622 aa21.92■■□□□ 1.1
NDEL1-201ENST00000334527 C1GALT1C1Q96EU7 318 aa21.92■■□□□ 1.1
NDEL1-201ENST00000334527 ZNF681Q96N22 645 aa21.92■■□□□ 1.1
NDEL1-201ENST00000334527 C1QTNF2Q9BXJ5 285 aa21.92■■□□□ 1.1
NDEL1-201ENST00000334527 ABCB9Q9NP78 766 aa21.92■■□□□ 1.1
NDEL1-201ENST00000334527 TOR4AQ9NXH8 423 aa21.92■■□□□ 1.1
NDEL1-201ENST00000334527 CHST2Q9Y4C5 530 aa21.92■■□□□ 1.1
NDEL1-201ENST00000334527 A0A1W2PQU0 124 aa21.92■■□□□ 1.1
NDEL1-201ENST00000334527 ISM1B1AKI9 464 aa21.92■■□□□ 1.1
NDEL1-201ENST00000334527 STK25O00506 426 aa21.92■■□□□ 1.1
NDEL1-201ENST00000334527 LRRTM2O43300 516 aa21.92■■□□□ 1.1
NDEL1-201ENST00000334527 CCNYL3P0C7X3 344 aa21.92■■□□□ 1.1
NDEL1-201ENST00000334527 STXBP1P61764 594 aaKnown RBP21.92■■□□□ 1.1
NDEL1-201ENST00000334527 BTN3A2P78410 334 aa21.92■■□□□ 1.1
NDEL1-201ENST00000334527 ST3GAL3Q11203 375 aa21.92■■□□□ 1.1
NDEL1-201ENST00000334527 RASSF6Q6ZTQ3 369 aa21.92■■□□□ 1.1
NDEL1-201ENST00000334527 GJD3Q8N144 294 aa21.92■■□□□ 1.1
NDEL1-201ENST00000334527 CLDN22Q8N7P3 220 aa21.92■■□□□ 1.1
NDEL1-201ENST00000334527 NR4A3Q92570 626 aa21.92■■□□□ 1.1
NDEL1-201ENST00000334527 NEDD4LQ96PU5 975 aa21.92■■□□□ 1.1
NDEL1-201ENST00000334527 SARGQ9BW04 601 aa21.92■■□□□ 1.1
NDEL1-201ENST00000334527 SFXN1Q9H9B4 322 aa21.92■■□□□ 1.1
NDEL1-201ENST00000334527 POLMQ9NP87 494 aaPredicted RBP21.92■■□□□ 1.1
NDEL1-201ENST00000334527 TIGARQ9NQ88 270 aa21.92■■□□□ 1.1
NDEL1-201ENST00000334527 CALML5Q9NZT1 146 aa21.92■■□□□ 1.1
NDEL1-201ENST00000334527 PLEKHB1Q9UF11 243 aaPredicted RBP21.92■■□□□ 1.1
NDEL1-201ENST00000334527 LIPT1Q9Y234 373 aa21.92■■□□□ 1.1
NDEL1-201ENST00000334527 CCNKO75909 580 aa21.91■■□□□ 1.1
NDEL1-201ENST00000334527 APODP05090 189 aa21.91■■□□□ 1.1
NDEL1-201ENST00000334527 IL7P13232 177 aa21.91■■□□□ 1.1
NDEL1-201ENST00000334527 IGFALSP35858 605 aa21.91■■□□□ 1.1
NDEL1-201ENST00000334527 TSFMP43897 325 aaKnown RBP21.91■■□□□ 1.1
NDEL1-201ENST00000334527 GPM6BQ13491 265 aa21.91■■□□□ 1.1
NDEL1-201ENST00000334527 TJAP1Q5JTD0 557 aa21.91■■□□□ 1.1
NDEL1-201ENST00000334527 ZNF513Q8N8E2 541 aaPredicted RBP21.91■■□□□ 1.1
NDEL1-201ENST00000334527 PIGXQ8TBF5 258 aa21.91■■□□□ 1.1
NDEL1-201ENST00000334527 KCTD7Q96MP8 289 aa21.91■■□□□ 1.1
NDEL1-201ENST00000334527 SLC17A9Q9BYT1 436 aa21.91■■□□□ 1.1
NDEL1-201ENST00000334527 PLA2G2FQ9BZM2 168 aa21.91■■□□□ 1.1
NDEL1-201ENST00000334527 PCDHGB2Q9Y5G2 931 aa21.91■■□□□ 1.1
NDEL1-201ENST00000334527 MAT2AP31153 395 aaKnown RBP21.91■■□□□ 1.1
NDEL1-201ENST00000334527 SDC2P34741 201 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms