RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 DMBX1Q8NFW5 382 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 OR13C3Q8NGS6 347 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 OR4A16Q8NH70 328 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 UBA3Q8TBC4 463 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 METTL21AQ8WXB1 218 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 GGHQ92820 318 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 SLCO2A1Q92959 643 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 ZIM3Q96PE6 472 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 BTBD9Q96Q07 612 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 FRMD8P1Q9BZ68 369 aaPredicted RBP3.58□□□□□ -1.84
SMCO3-201ENST00000316048 UPF3AQ9H1J1 476 aaKnown RBP3.58□□□□□ -1.84
SMCO3-201ENST00000316048 HIPK2Q9H2X6 1198 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 NXF3Q9H4D5 531 aaKnown RBP3.58□□□□□ -1.84
SMCO3-201ENST00000316048 INTS9Q9NV88 658 aaKnown RBP3.58□□□□□ -1.84
SMCO3-201ENST00000316048 GDAP2Q9NXN4 497 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 FAM153AQ9UHL3 310 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 TSPAN16Q9UKR8 245 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 FOXA2Q9Y261 457 aaPredicted RBP3.58□□□□□ -1.84
SMCO3-201ENST00000316048 SNX24Q9Y343 169 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 HES2Q9Y543 173 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 COLEC10Q9Y6Z7 277 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 ZSWIM8A7E2V4 1837 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 TRBV4-1A0A0J9YWV2 114 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 CCDC162PA2VCL2 907 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 H3BQF6 201 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 PGK1P00558 417 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 GPIP06744 558 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 ASGR1P07306 291 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 EZRP15311 586 aaKnown RBP3.58□□□□□ -1.84
SMCO3-201ENST00000316048 ELAVL4P26378 380 aaKnown RBP3.58□□□□□ -1.84
SMCO3-201ENST00000316048 HPDP32754 393 aaPredicted RBP3.58□□□□□ -1.84
SMCO3-201ENST00000316048 PCK1P35558 622 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 ACADSBP45954 432 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 PITPNBP48739 271 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 SLC34A1Q06495 639 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 IFFO1Q0D2I5 559 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 SIX1Q15475 284 aaPredicted RBP3.58□□□□□ -1.84
SMCO3-201ENST00000316048 DEFB115Q30KQ5 88 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 PTPN20Q4JDL3 420 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 BOLA3Q53S33 107 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 CCNYL2Q5T2Q4 361 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 ARHGAP17Q68EM7 881 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 RBMS3Q6XE24 437 aaKnown RBP3.58□□□□□ -1.84
SMCO3-201ENST00000316048 WDR88Q6ZMY6 472 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 C17orf107Q6ZR85 190 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 SLC16A9Q7RTY1 509 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 TMEM110Q86TL2 294 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 PRUNE1Q86TP1 453 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 ACOT1Q86TX2 421 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 NFE4Q86UQ8 179 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 SERINC5Q86VE9 423 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 MAB21L3Q8N8X9 362 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 TMEM185AQ8NFB2 350 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 OR7A2PQ8NGA2 310 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 FAM76AQ8TAV0 307 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 C1orf54Q8WWF1 131 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 ART4Q93070 314 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 C18orf25Q96B23 403 aaPredicted RBP3.58□□□□□ -1.84
SMCO3-201ENST00000316048 NXPE2Q96DL1 559 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 SNF8Q96H20 258 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 CPXM1Q96SM3 734 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 MRPL45Q9BRJ2 306 aaKnown RBP3.58□□□□□ -1.84
SMCO3-201ENST00000316048 TRIM51Q9BSJ1 452 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 DPEP2Q9H4A9 486 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 C10orf88Q9H8K7 445 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 TUBGCP4Q9UGJ1 667 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 ASIC3Q9UHC3 531 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 RNF103-CHMP3A0A140T963 221 aa3.57□□□□□ -1.84
SMCO3-201ENST00000316048 FAM149AA5PLN7 773 aa3.57□□□□□ -1.84
SMCO3-201ENST00000316048 ERICH4A6NGS2 130 aa3.57□□□□□ -1.84
SMCO3-201ENST00000316048 RNF103O00237 685 aa3.57□□□□□ -1.84
SMCO3-201ENST00000316048 PSMD3O43242 534 aa3.57□□□□□ -1.84
SMCO3-201ENST00000316048 GMNNO75496 209 aa3.57□□□□□ -1.84
SMCO3-201ENST00000316048 TGFAP01135 160 aa3.57□□□□□ -1.84
SMCO3-201ENST00000316048 KRT14P02533 472 aa3.57□□□□□ -1.84
SMCO3-201ENST00000316048 CDK4P11802 303 aa3.57□□□□□ -1.84
SMCO3-201ENST00000316048 ANK1P16157 1881 aa3.57□□□□□ -1.84
SMCO3-201ENST00000316048 CCNA2P20248 432 aa3.57□□□□□ -1.84
SMCO3-201ENST00000316048 KDELR1P24390 212 aa3.57□□□□□ -1.84
SMCO3-201ENST00000316048 RBMS1P29558 406 aaKnown RBP3.57□□□□□ -1.84
SMCO3-201ENST00000316048 SDC4P31431 198 aa3.57□□□□□ -1.84
SMCO3-201ENST00000316048 RPL9P32969 192 aaKnown RBP3.57□□□□□ -1.84
SMCO3-201ENST00000316048 CD151P48509 253 aa3.57□□□□□ -1.84
SMCO3-201ENST00000316048 BTG1P62324 171 aa3.57□□□□□ -1.84
SMCO3-201ENST00000316048 ARL16Q0P5N6 197 aa3.57□□□□□ -1.84
SMCO3-201ENST00000316048 BST2Q10589 180 aaKnown RBP3.57□□□□□ -1.84
SMCO3-201ENST00000316048 MSLNQ13421 630 aaPredicted RBP3.57□□□□□ -1.84
SMCO3-201ENST00000316048 GOLGA7BQ2TAP0 167 aa3.57□□□□□ -1.84
SMCO3-201ENST00000316048 TAF1BQ53T94 588 aaPredicted RBP3.57□□□□□ -1.84
SMCO3-201ENST00000316048 XKR6Q5GH73 641 aa3.57□□□□□ -1.84
SMCO3-201ENST00000316048 ARMCX4Q5H9R4 360 aa3.57□□□□□ -1.84
SMCO3-201ENST00000316048 CEP85LQ5SZL2 805 aa3.57□□□□□ -1.84
SMCO3-201ENST00000316048 C16orf87Q6PH81 154 aa3.57□□□□□ -1.84
SMCO3-201ENST00000316048 LEKR1Q6ZMV7 388 aa3.57□□□□□ -1.84
SMCO3-201ENST00000316048 TRMT10CQ7L0Y3 403 aaKnown RBP3.57□□□□□ -1.84
SMCO3-201ENST00000316048 EXOC3L1Q86VI1 746 aa3.57□□□□□ -1.84
SMCO3-201ENST00000316048 FAM228AQ86W67 206 aa3.57□□□□□ -1.84
SMCO3-201ENST00000316048 KIRREL3Q8IZU9 778 aa3.57□□□□□ -1.84
SMCO3-201ENST00000316048 ARFGAP2Q8N6H7 521 aa3.57□□□□□ -1.84
SMCO3-201ENST00000316048 MRPL43Q8N983 215 aaKnown RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms