RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 ZNF619Q8N2I2 560 aa8.71□□□□□ -1.02
PTPRE-202ENST00000306042 AQP11Q8NBQ7 271 aa8.71□□□□□ -1.02
PTPRE-202ENST00000306042 TRNT1Q96Q11 434 aaKnown RBP8.71□□□□□ -1.02
PTPRE-202ENST00000306042 OR5B2Q96R09 309 aa8.71□□□□□ -1.02
PTPRE-202ENST00000306042 TSSK6Q9BXA6 273 aa8.71□□□□□ -1.02
PTPRE-202ENST00000306042 NT5DC2Q9H857 520 aa8.71□□□□□ -1.02
PTPRE-202ENST00000306042 ACSS1Q9NUB1 689 aaPredicted RBP8.71□□□□□ -1.02
PTPRE-202ENST00000306042 CAMK2AQ9UQM7 478 aa8.71□□□□□ -1.02
PTPRE-202ENST00000306042 PCDHB14Q9Y5E9 798 aa8.71□□□□□ -1.02
PTPRE-202ENST00000306042 A0A1W2PPL8 197 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 ZNF891A8MT65 544 aaPredicted RBP8.7□□□□□ -1.02
PTPRE-202ENST00000306042 PRR23D1E9PI22 279 aaPredicted RBP8.7□□□□□ -1.02
PTPRE-202ENST00000306042 NSA2O95478 260 aaKnown RBP8.7□□□□□ -1.02
PTPRE-202ENST00000306042 CD2P06729 351 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 PRR23D2P0DMB1 279 aaPredicted RBP8.7□□□□□ -1.02
PTPRE-202ENST00000306042 ARFIP1P53367 373 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 DEFA1P59665 94 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 DEFA3P59666 94 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 CRYZQ08257 329 aaKnown RBP8.7□□□□□ -1.02
PTPRE-202ENST00000306042 KRR1Q13601 381 aaKnown RBP8.7□□□□□ -1.02
PTPRE-202ENST00000306042 PRAMEF20Q5VT98 475 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 ZNF578Q96N58 590 aaPredicted RBP8.7□□□□□ -1.02
PTPRE-202ENST00000306042 GUCD1Q96NT3 240 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 TRAPPC9Q96Q05 1148 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 YIPF3Q9GZM5 350 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 UBQLN4Q9NRR5 601 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 EMCNQ9ULC0 261 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 SLC35A3Q9Y2D2 325 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 ZNF451Q9Y4E5 1061 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 AP4B1Q9Y6B7 739 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 IGHV1OR21-1A0A087WYE8 117 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 OR7A17O14581 309 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 ANKRD28O15084 1053 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 SLC35E2P0CK97 266 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 CD82P27701 267 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 TMEM201Q5SNT2 666 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 C18orf63Q68DL7 685 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 OGFOD2Q6N063 350 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 C1orf94Q6P1W5 598 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 MAMDC2Q7Z304 686 aaPredicted RBP8.7□□□□□ -1.02
PTPRE-202ENST00000306042 UBE2Q1Q7Z7E8 422 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 CDS1Q92903 461 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 SGTBQ96EQ0 304 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 CRELD1Q96HD1 420 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 EGLN2Q96KS0 407 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 OR10A5Q9H207 317 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 CHST8Q9H2A9 424 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 ZNF160Q9HCG1 818 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 PALMDQ9NP74 551 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 SDR39U1Q9NRG7 319 aaPredicted RBP8.7□□□□□ -1.02
PTPRE-202ENST00000306042 TEX10Q9NXF1 929 aaPredicted RBP8.7□□□□□ -1.02
PTPRE-202ENST00000306042 NDUFA13Q9P0J0 144 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 ZNF229Q9UJW7 825 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 RBM7Q9Y580 266 aaKnown RBP8.7□□□□□ -1.02
PTPRE-202ENST00000306042 DAPL1A0PJW8 107 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 PPM1DO15297 605 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 GALR2O43603 387 aaPredicted RBP8.7□□□□□ -1.02
PTPRE-202ENST00000306042 CH25HO95992 272 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 ZNF43P17038 809 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 ETV4P43268 484 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 PPP3R1P63098 170 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 RASGEF1BQ0VAM2 473 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 SGCAQ16586 387 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 LPCAT4Q643R3 524 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 OR1J4Q8NGS1 313 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 SFXN5Q8TD22 340 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 BTBD2Q9BX70 525 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 TRIM8Q9BZR9 551 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 GALNT8Q9NY28 637 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 USP36Q9P275 1121 aaKnown RBP8.7□□□□□ -1.02
PTPRE-202ENST00000306042 PNMA8CA0A1B0GUJ8 204 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 GALR3O60755 368 aaPredicted RBP8.7□□□□□ -1.02
PTPRE-202ENST00000306042 FPR1P21462 350 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 SLC9A3P48764 834 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 PPP1R8Q12972 351 aaKnown RBP8.7□□□□□ -1.02
PTPRE-202ENST00000306042 DNASE1L3Q13609 305 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 RGNQ15493 299 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 VWA2Q5GFL6 755 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 AGAP7PQ5VUJ5 663 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 SLC22A10Q63ZE4 541 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 OR5M10Q6IEU7 315 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 HMBOX1Q6NT76 420 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 KCTD8Q6ZWB6 473 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 NAGSQ8N159 534 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 SIRT6Q8N6T7 355 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 FAM86B1Q8N7N1 296 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 OR51A7Q8NH64 312 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 CHTF18Q8WVB6 975 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 RADILQ96JH8 1075 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 SLC46A1Q96NT5 459 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 AGAP4Q96P64 663 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 CDCP1Q9H5V8 836 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 LYRM4Q9HD34 91 aa8.7□□□□□ -1.02
PTPRE-202ENST00000306042 IGHV3-20A0A0C4DH32 117 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 SULT2B1O00204 365 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 DPM1O60762 260 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 H6PDO95479 791 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 IL11RAQ14626 422 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 ELAVL1Q15717 326 aaKnown RBP8.69□□□□□ -1.02
PTPRE-202ENST00000306042 ENDOVQ8N8Q3 282 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms