RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 COL4A6Q14031 1691 aa13.27□□□□□ -0.29
SDC2-201ENST00000302190 MEN1O00255 615 aa13.27□□□□□ -0.29
SDC2-201ENST00000302190 AKAP8O43823 692 aaKnown RBP13.27□□□□□ -0.29
SDC2-201ENST00000302190 ABLIM3O94929 683 aa13.27□□□□□ -0.29
SDC2-201ENST00000302190 ADAP00813 363 aa13.27□□□□□ -0.29
SDC2-201ENST00000302190 RLN1P04808 185 aa13.27□□□□□ -0.29
SDC2-201ENST00000302190 CA3P07451 260 aa13.27□□□□□ -0.29
SDC2-201ENST00000302190 SLC35G6P0C7Q6 338 aa13.27□□□□□ -0.29
SDC2-201ENST00000302190 CCR2P41597 374 aa13.27□□□□□ -0.29
SDC2-201ENST00000302190 PIP5KL1Q5T9C9 394 aa13.27□□□□□ -0.29
SDC2-201ENST00000302190 VRK2Q86Y07 508 aa13.27□□□□□ -0.29
SDC2-201ENST00000302190 KLHDC8AQ8IYD2 350 aa13.27□□□□□ -0.29
SDC2-201ENST00000302190 NUP43Q8NFH3 380 aa13.27□□□□□ -0.29
SDC2-201ENST00000302190 OR6C4Q8NGE1 309 aa13.27□□□□□ -0.29
SDC2-201ENST00000302190 OR9A2Q8NGT5 310 aa13.27□□□□□ -0.29
SDC2-201ENST00000302190 FKBP10Q96AY3 582 aa13.27□□□□□ -0.29
SDC2-201ENST00000302190 DHRS9Q9BPW9 319 aa13.27□□□□□ -0.29
SDC2-201ENST00000302190 DPEP2Q9H4A9 486 aa13.27□□□□□ -0.29
SDC2-201ENST00000302190 MED20Q9H944 212 aa13.27□□□□□ -0.29
SDC2-201ENST00000302190 IL23AQ9NPF7 189 aa13.27□□□□□ -0.29
SDC2-201ENST00000302190 FBXL12Q9NXK8 326 aa13.27□□□□□ -0.29
SDC2-201ENST00000302190 NLGN3Q9NZ94 848 aa13.27□□□□□ -0.29
SDC2-201ENST00000302190 ZNF639Q9UID6 485 aa13.27□□□□□ -0.29
SDC2-201ENST00000302190 A0A1B0GVT2 93 aa13.26□□□□□ -0.29
SDC2-201ENST00000302190 HPGDSO60760 199 aa13.26□□□□□ -0.29
SDC2-201ENST00000302190 ADRB3P13945 408 aa13.26□□□□□ -0.29
SDC2-201ENST00000302190 ALAS2P22557 587 aa13.26□□□□□ -0.29
SDC2-201ENST00000302190 GRK5P34947 590 aa13.26□□□□□ -0.29
SDC2-201ENST00000302190 GIPRP48546 466 aa13.26□□□□□ -0.29
SDC2-201ENST00000302190 RPL6Q02878 288 aaKnown RBP13.26□□□□□ -0.29
SDC2-201ENST00000302190 ST3GAL3Q11203 375 aa13.26□□□□□ -0.29
SDC2-201ENST00000302190 IRAK1BP1Q5VVH5 260 aa13.26□□□□□ -0.29
SDC2-201ENST00000302190 AGAP6Q5VW22 663 aa13.26□□□□□ -0.29
SDC2-201ENST00000302190 CNIH2Q6PI25 160 aa13.26□□□□□ -0.29
SDC2-201ENST00000302190 FRRS1Q6ZNA5 592 aa13.26□□□□□ -0.29
SDC2-201ENST00000302190 ERN2Q76MJ5 926 aaKnown RBP13.26□□□□□ -0.29
SDC2-201ENST00000302190 CPOQ8IVL8 374 aa13.26□□□□□ -0.29
SDC2-201ENST00000302190 SYNPOQ8N3V7 929 aa13.26□□□□□ -0.29
SDC2-201ENST00000302190 CHCHD4Q8N4Q1 142 aa13.26□□□□□ -0.29
SDC2-201ENST00000302190 GATSQ8NAP1 163 aa13.26□□□□□ -0.29
SDC2-201ENST00000302190 OR8K3Q8NH51 312 aa13.26□□□□□ -0.29
SDC2-201ENST00000302190 CNDP2Q96KP4 475 aaKnown RBP13.26□□□□□ -0.29
SDC2-201ENST00000302190 AGAP4Q96P64 663 aa13.26□□□□□ -0.29
SDC2-201ENST00000302190 LMAN2LQ9H0V9 348 aa13.26□□□□□ -0.29
SDC2-201ENST00000302190 SLC35C2Q9NQQ7 365 aa13.26□□□□□ -0.29
SDC2-201ENST00000302190 ING4Q9UNL4 249 aa13.26□□□□□ -0.29
SDC2-201ENST00000302190 INMT-MINDY4F8WBC2 141 aa13.26□□□□□ -0.29
SDC2-201ENST00000302190 M0R082 166 aa13.26□□□□□ -0.29
SDC2-201ENST00000302190 MID1O15344 667 aa13.26□□□□□ -0.29
SDC2-201ENST00000302190 KHDRBS3O75525 346 aaKnown RBP13.26□□□□□ -0.29
SDC2-201ENST00000302190 HLA-DPB1P04440 258 aa13.26□□□□□ -0.29
SDC2-201ENST00000302190 DRD5P21918 477 aa13.26□□□□□ -0.29
SDC2-201ENST00000302190 PCMT1P22061 227 aa13.26□□□□□ -0.29
SDC2-201ENST00000302190 SOX9P48436 509 aa13.26□□□□□ -0.29
SDC2-201ENST00000302190 WNT3P56703 355 aa13.26□□□□□ -0.29
SDC2-201ENST00000302190 SLC9B2Q86UD5 537 aa13.26□□□□□ -0.29
SDC2-201ENST00000302190 LRRC20Q8TCA0 184 aa13.26□□□□□ -0.29
SDC2-201ENST00000302190 UBTD2Q8WUN7 234 aa13.26□□□□□ -0.29
SDC2-201ENST00000302190 BRF2Q9HAW0 419 aa13.26□□□□□ -0.29
SDC2-201ENST00000302190 ENAMQ9NRM1 1142 aa13.26□□□□□ -0.29
SDC2-201ENST00000302190 A0A075B6Q4 140 aa13.26□□□□□ -0.29
SDC2-201ENST00000302190 RIIAD1A6NNX1 92 aa13.26□□□□□ -0.29
SDC2-201ENST00000302190 GFYI3L273 518 aa13.26□□□□□ -0.29
SDC2-201ENST00000302190 TYRP1P17643 537 aa13.26□□□□□ -0.29
SDC2-201ENST00000302190 CMPK1P30085 196 aa13.26□□□□□ -0.29
SDC2-201ENST00000302190 MAP2K3P46734 347 aa13.26□□□□□ -0.29
SDC2-201ENST00000302190 PDZD3Q86UT5 571 aa13.26□□□□□ -0.29
SDC2-201ENST00000302190 OR6T1Q8NGN1 323 aa13.26□□□□□ -0.29
SDC2-201ENST00000302190 MAP6Q96JE9 813 aa13.26□□□□□ -0.29
SDC2-201ENST00000302190 ABCG5Q9H222 651 aa13.26□□□□□ -0.29
SDC2-201ENST00000302190 ZNF226Q9NYT6 803 aa13.26□□□□□ -0.29
SDC2-201ENST00000302190 TAS2R7Q9NYW3 318 aa13.26□□□□□ -0.29
SDC2-201ENST00000302190 POLR2CP19387 275 aaPredicted RBP13.25□□□□□ -0.29
SDC2-201ENST00000302190 ARL4DP49703 201 aa13.25□□□□□ -0.29
SDC2-201ENST00000302190 TMEM31Q5JXX7 168 aa13.25□□□□□ -0.29
SDC2-201ENST00000302190 MSANTD1Q6ZTZ1 278 aa13.25□□□□□ -0.29
SDC2-201ENST00000302190 CALHM3Q86XJ0 350 aa13.25□□□□□ -0.29
SDC2-201ENST00000302190 PLA2G15Q8NCC3 412 aa13.25□□□□□ -0.29
SDC2-201ENST00000302190 BEST4Q8NFU0 473 aa13.25□□□□□ -0.29
SDC2-201ENST00000302190 OR52P1PQ8NH57 321 aa13.25□□□□□ -0.29
SDC2-201ENST00000302190 YIPF6Q96EC8 236 aa13.25□□□□□ -0.29
SDC2-201ENST00000302190 TRMT2BQ96GJ1 504 aaKnown RBP13.25□□□□□ -0.29
SDC2-201ENST00000302190 SAMD8Q96LT4 415 aa13.25□□□□□ -0.29
SDC2-201ENST00000302190 ZSWIM3Q96MP5 696 aa13.25□□□□□ -0.29
SDC2-201ENST00000302190 BRD7Q9NPI1 651 aa13.25□□□□□ -0.29
SDC2-201ENST00000302190 KCNN3Q9UGI6 736 aa13.25□□□□□ -0.29
SDC2-201ENST00000302190 HCN2Q9UL51 889 aa13.25□□□□□ -0.29
SDC2-201ENST00000302190 NTNG1Q9Y2I2 539 aa13.25□□□□□ -0.29
SDC2-201ENST00000302190 FAM171A2A8MVW0 826 aa13.25□□□□□ -0.29
SDC2-201ENST00000302190 KIAA0355O15063 1070 aa13.25□□□□□ -0.29
SDC2-201ENST00000302190 CHST10O43529 356 aa13.25□□□□□ -0.29
SDC2-201ENST00000302190 PRKYO43930 277 aa13.25□□□□□ -0.29
SDC2-201ENST00000302190 SRPRAP08240 638 aaKnown RBP13.25□□□□□ -0.29
SDC2-201ENST00000302190 ARAFP10398 606 aa13.25□□□□□ -0.29
SDC2-201ENST00000302190 IL1RNP18510 177 aa13.25□□□□□ -0.29
SDC2-201ENST00000302190 CDONQ4KMG0 1287 aa13.25□□□□□ -0.29
SDC2-201ENST00000302190 PXDC1Q5TGL8 231 aa13.25□□□□□ -0.29
SDC2-201ENST00000302190 SLC36A4Q6YBV0 504 aa13.25□□□□□ -0.29
SDC2-201ENST00000302190 LINGO2Q7L985 606 aa13.25□□□□□ -0.29
SDC2-201ENST00000302190 NARS2Q96I59 477 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms