RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 IGFBP1P08833 259 aaPredicted RBP17.27■□□□□ 0.36
HOXC11-201ENST00000243082 NT5EP21589 574 aa17.27■□□□□ 0.36
HOXC11-201ENST00000243082 POU1F1P28069 291 aa17.27■□□□□ 0.36
HOXC11-201ENST00000243082 CNR2P34972 360 aa17.27■□□□□ 0.36
HOXC11-201ENST00000243082 UGT2B15P54855 530 aa17.27■□□□□ 0.36
HOXC11-201ENST00000243082 NXPH1P58417 271 aa17.27■□□□□ 0.36
HOXC11-201ENST00000243082 CDC42P60953 191 aa17.27■□□□□ 0.36
HOXC11-201ENST00000243082 TARDBPQ13148 414 aaKnown RBP eCLIP17.27■□□□□ 0.36
HOXC11-201ENST00000243082 TYW3Q6IPR3 259 aaKnown RBP17.27■□□□□ 0.36
HOXC11-201ENST00000243082 FAM92BQ6ZTR7 304 aa17.27■□□□□ 0.36
HOXC11-201ENST00000243082 CLIP4Q8N3C7 705 aa17.27■□□□□ 0.36
HOXC11-201ENST00000243082 MORN4Q8NDC4 146 aa17.27■□□□□ 0.36
HOXC11-201ENST00000243082 OR52P1PQ8NH57 321 aa17.27■□□□□ 0.36
HOXC11-201ENST00000243082 GGHQ92820 318 aa17.27■□□□□ 0.36
HOXC11-201ENST00000243082 SLC38A3Q99624 504 aa17.27■□□□□ 0.36
HOXC11-201ENST00000243082 CDX2Q99626 313 aaPredicted RBP17.27■□□□□ 0.36
HOXC11-201ENST00000243082 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.27■□□□□ 0.36
HOXC11-201ENST00000243082 PIGUQ9H490 435 aa17.27■□□□□ 0.36
HOXC11-201ENST00000243082 MTHFD2LQ9H903 347 aaPredicted RBP17.27■□□□□ 0.36
HOXC11-201ENST00000243082 GPN2Q9H9Y4 310 aaPredicted RBP17.27■□□□□ 0.36
HOXC11-201ENST00000243082 AMBNQ9NP70 447 aa17.27■□□□□ 0.36
HOXC11-201ENST00000243082 ADAP2Q9NPF8 381 aa17.27■□□□□ 0.36
HOXC11-201ENST00000243082 IMPAD1Q9NX62 359 aa17.27■□□□□ 0.36
HOXC11-201ENST00000243082 MAT2BQ9NZL9 334 aa17.27■□□□□ 0.36
HOXC11-201ENST00000243082 CLCA2Q9UQC9 943 aa17.27■□□□□ 0.36
HOXC11-201ENST00000243082 USP34Q70CQ2 3546 aa17.27■□□□□ 0.36
HOXC11-201ENST00000243082 ABCA7Q8IZY2 2146 aa17.27■□□□□ 0.35
HOXC11-201ENST00000243082 CLCA1A8K7I4 914 aa17.26■□□□□ 0.35
HOXC11-201ENST00000243082 SRPX2O60687 465 aaPredicted RBP17.26■□□□□ 0.35
HOXC11-201ENST00000243082 FADS2O95864 444 aaKnown RBP17.26■□□□□ 0.35
HOXC11-201ENST00000243082 CT62P0C5K7 136 aa17.26■□□□□ 0.35
HOXC11-201ENST00000243082 CCNA2P20248 432 aa17.26■□□□□ 0.35
HOXC11-201ENST00000243082 LSM11P83369 360 aaKnown RBP eCLIP17.26■□□□□ 0.35
HOXC11-201ENST00000243082 HPCAP84074 193 aa17.26■□□□□ 0.35
HOXC11-201ENST00000243082 DEFB133Q30KQ1 61 aa17.26■□□□□ 0.35
HOXC11-201ENST00000243082 INAVAQ3KP66 663 aa17.26■□□□□ 0.35
HOXC11-201ENST00000243082 SYT6Q5T7P8 510 aaPredicted RBP17.26■□□□□ 0.35
HOXC11-201ENST00000243082 SLC16A12Q6ZSM3 486 aa17.26■□□□□ 0.35
HOXC11-201ENST00000243082 ZER1Q7Z7L7 766 aa17.26■□□□□ 0.35
HOXC11-201ENST00000243082 SVOPQ8N4V2 548 aa17.26■□□□□ 0.35
HOXC11-201ENST00000243082 CAMKK1Q8N5S9 505 aa17.26■□□□□ 0.35
HOXC11-201ENST00000243082 ZNF675Q8TD23 568 aa17.26■□□□□ 0.35
HOXC11-201ENST00000243082 CTHRC1Q96CG8 243 aa17.26■□□□□ 0.35
HOXC11-201ENST00000243082 TCTN2Q96GX1 697 aa17.26■□□□□ 0.35
HOXC11-201ENST00000243082 SDF2Q99470 211 aa17.26■□□□□ 0.35
HOXC11-201ENST00000243082 COPS4Q9BT78 406 aa17.26■□□□□ 0.35
HOXC11-201ENST00000243082 TIMMDC1Q9NPL8 285 aa17.26■□□□□ 0.35
HOXC11-201ENST00000243082 LMO7DNF2Z398 122 aa17.26■□□□□ 0.35
HOXC11-201ENST00000243082 SOX14O95416 240 aa17.26■□□□□ 0.35
HOXC11-201ENST00000243082 TP53P04637 393 aaPredicted RBP17.26■□□□□ 0.35
HOXC11-201ENST00000243082 BCKDHBP21953 392 aa17.26■□□□□ 0.35
HOXC11-201ENST00000243082 NUDT6P53370 316 aa17.26■□□□□ 0.35
HOXC11-201ENST00000243082 HNRNPKP61978 463 aaKnown RBP eCLIP17.26■□□□□ 0.35
HOXC11-201ENST00000243082 MVKQ03426 396 aa17.26■□□□□ 0.35
HOXC11-201ENST00000243082 NFATC3Q12968 1075 aa17.26■□□□□ 0.35
HOXC11-201ENST00000243082 OGFOD3Q6PK18 319 aa17.26■□□□□ 0.35
HOXC11-201ENST00000243082 CCDC81Q6ZN84 652 aa17.26■□□□□ 0.35
HOXC11-201ENST00000243082 OR4K5Q8NGD3 323 aa17.26■□□□□ 0.35
HOXC11-201ENST00000243082 POLR2J3Q9H1A7 115 aaKnown RBP17.26■□□□□ 0.35
HOXC11-201ENST00000243082 WDR45Q9Y484 360 aa17.26■□□□□ 0.35
HOXC11-201ENST00000243082 A0A0A6YYC8 382 aaPredicted RBP17.25■□□□□ 0.35
HOXC11-201ENST00000243082 I3L1I5 382 aaPredicted RBP17.25■□□□□ 0.35
HOXC11-201ENST00000243082 FOXS1O43638 330 aa17.25■□□□□ 0.35
HOXC11-201ENST00000243082 IFI6P09912 130 aa17.25■□□□□ 0.35
HOXC11-201ENST00000243082 MMP11P24347 488 aa17.25■□□□□ 0.35
HOXC11-201ENST00000243082 C21orf33P30042 268 aaPredicted RBP17.25■□□□□ 0.35
HOXC11-201ENST00000243082 GABRA4P48169 554 aa17.25■□□□□ 0.35
HOXC11-201ENST00000243082 CSNK1EP49674 416 aaKnown RBP17.25■□□□□ 0.35
HOXC11-201ENST00000243082 PUS10Q3MIT2 529 aaKnown RBP17.25■□□□□ 0.35
HOXC11-201ENST00000243082 CCNJQ5T5M9 372 aa17.25■□□□□ 0.35
HOXC11-201ENST00000243082 CD300LDQ6UXZ3 194 aa17.25■□□□□ 0.35
HOXC11-201ENST00000243082 DGAT2L6Q6ZPD8 337 aa17.25■□□□□ 0.35
HOXC11-201ENST00000243082 ANKRD13BQ86YJ7 626 aa17.25■□□□□ 0.35
HOXC11-201ENST00000243082 LINC00471Q8N535 108 aa17.25■□□□□ 0.35
HOXC11-201ENST00000243082 CLDN23Q96B33 292 aa17.25■□□□□ 0.35
HOXC11-201ENST00000243082 TBC1D17Q9HA65 648 aa17.25■□□□□ 0.35
HOXC11-201ENST00000243082 NDOR1Q9UHB4 597 aa17.25■□□□□ 0.35
HOXC11-201ENST00000243082 ENPP5Q9UJA9 477 aa17.25■□□□□ 0.35
HOXC11-201ENST00000243082 SLC13A4Q9UKG4 626 aa17.25■□□□□ 0.35
HOXC11-201ENST00000243082 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.25■□□□□ 0.35
HOXC11-201ENST00000243082 SDC3O75056 442 aa17.25■□□□□ 0.35
HOXC11-201ENST00000243082 CDK4P11802 303 aa17.25■□□□□ 0.35
HOXC11-201ENST00000243082 TRHRP34981 398 aaPredicted RBP17.25■□□□□ 0.35
HOXC11-201ENST00000243082 MAP3K8P41279 467 aa17.25■□□□□ 0.35
HOXC11-201ENST00000243082 EXOSC7Q15024 291 aaKnown RBP17.25■□□□□ 0.35
HOXC11-201ENST00000243082 SLX4IPQ5VYV7 408 aa17.25■□□□□ 0.35
HOXC11-201ENST00000243082 C1orf94Q6P1W5 598 aa17.25■□□□□ 0.35
HOXC11-201ENST00000243082 DIO2Q92813 273 aa17.25■□□□□ 0.35
HOXC11-201ENST00000243082 ZNF285Q96NJ3 590 aa17.25■□□□□ 0.35
HOXC11-201ENST00000243082 GPA33Q99795 319 aa17.25■□□□□ 0.35
HOXC11-201ENST00000243082 ZNF350Q9GZX5 532 aa17.25■□□□□ 0.35
HOXC11-201ENST00000243082 UCKL1Q9NWZ5 548 aa17.25■□□□□ 0.35
HOXC11-201ENST00000243082 SELENONQ9NZV5 590 aa17.25■□□□□ 0.35
HOXC11-201ENST00000243082 ZNF443Q9Y2A4 671 aaPredicted RBP17.25■□□□□ 0.35
HOXC11-201ENST00000243082 IFT52Q9Y366 437 aa17.25■□□□□ 0.35
HOXC11-201ENST00000243082 CENPVL1A0A0U1RR11 272 aa17.24■□□□□ 0.35
HOXC11-201ENST00000243082 CLDN24A6NM45 220 aa17.24■□□□□ 0.35
HOXC11-201ENST00000243082 ZBTB11O95625 1053 aaPredicted RBP17.24■□□□□ 0.35
HOXC11-201ENST00000243082 CDK1P06493 297 aa17.24■□□□□ 0.35
HOXC11-201ENST00000243082 ALOX5P09917 674 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms