RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 ZFP36L2P47974 494 aaKnown RBP12.98□□□□□ -0.33
GPN3-201ENST00000228827 WNT3P56703 355 aa12.98□□□□□ -0.33
GPN3-201ENST00000228827 RPL38P63173 70 aaKnown RBP12.98□□□□□ -0.33
GPN3-201ENST00000228827 TFF3Q07654 80 aa12.98□□□□□ -0.33
GPN3-201ENST00000228827 CRYZQ08257 329 aaKnown RBP12.98□□□□□ -0.33
GPN3-201ENST00000228827 KIAA0040Q15053 153 aa12.98□□□□□ -0.33
GPN3-201ENST00000228827 GALNTL6Q49A17 601 aa12.98□□□□□ -0.33
GPN3-201ENST00000228827 KANK2Q63ZY3 851 aa12.98□□□□□ -0.33
GPN3-201ENST00000228827 ANKRD26P1Q6NSI1 321 aa12.98□□□□□ -0.33
GPN3-201ENST00000228827 IKBIPQ70UQ0 350 aa12.98□□□□□ -0.33
GPN3-201ENST00000228827 LARP4Q71RC2 724 aaKnown RBP eCLIP12.98□□□□□ -0.33
GPN3-201ENST00000228827 DDIASQ8IXT1 998 aa12.98□□□□□ -0.33
GPN3-201ENST00000228827 FAM83FQ8NEG4 500 aaPredicted RBP12.98□□□□□ -0.33
GPN3-201ENST00000228827 CLHC1Q8NHS4 586 aa12.98□□□□□ -0.33
GPN3-201ENST00000228827 EFHD2Q96C19 240 aaPredicted RBP12.98□□□□□ -0.33
GPN3-201ENST00000228827 AMDHD1Q96NU7 426 aa12.98□□□□□ -0.33
GPN3-201ENST00000228827 SPOCK3Q9BQ16 436 aa12.98□□□□□ -0.33
GPN3-201ENST00000228827 TRMOQ9BU70 441 aa12.98□□□□□ -0.33
GPN3-201ENST00000228827 ROPN1BQ9BZX4 212 aaPredicted RBP12.98□□□□□ -0.33
GPN3-201ENST00000228827 ENKD1Q9H0I2 346 aa12.98□□□□□ -0.33
GPN3-201ENST00000228827 STMN4Q9H169 189 aaPredicted RBP12.98□□□□□ -0.33
GPN3-201ENST00000228827 TUBB1Q9H4B7 451 aa12.98□□□□□ -0.33
GPN3-201ENST00000228827 ROPN1Q9HAT0 212 aaPredicted RBP12.98□□□□□ -0.33
GPN3-201ENST00000228827 NPDC1Q9NQX5 325 aaPredicted RBP12.98□□□□□ -0.33
GPN3-201ENST00000228827 DDX18Q9NVP1 670 aaKnown RBP12.98□□□□□ -0.33
GPN3-201ENST00000228827 CAMK2AQ9UQM7 478 aa12.98□□□□□ -0.33
GPN3-201ENST00000228827 NCOA6Q14686 2063 aaPredicted RBP12.98□□□□□ -0.33
GPN3-201ENST00000228827 ITPR2Q14571 2701 aa12.98□□□□□ -0.33
GPN3-201ENST00000228827 OR6C70A6NIJ9 312 aa12.97□□□□□ -0.33
GPN3-201ENST00000228827 NPHS1O60500 1241 aa12.97□□□□□ -0.33
GPN3-201ENST00000228827 TSPAN2O60636 221 aa12.97□□□□□ -0.33
GPN3-201ENST00000228827 COQ9O75208 318 aa12.97□□□□□ -0.33
GPN3-201ENST00000228827 HOXD4P09016 255 aaPredicted RBP12.97□□□□□ -0.33
GPN3-201ENST00000228827 BMP7P18075 431 aa12.97□□□□□ -0.33
GPN3-201ENST00000228827 PRPH2P23942 346 aa12.97□□□□□ -0.33
GPN3-201ENST00000228827 ELAVL4P26378 380 aaKnown RBP12.97□□□□□ -0.33
GPN3-201ENST00000228827 RFTN2Q52LD8 501 aaPredicted RBP12.97□□□□□ -0.33
GPN3-201ENST00000228827 ARL13AQ5H913 290 aaPredicted RBP12.97□□□□□ -0.33
GPN3-201ENST00000228827 DCST1Q5T197 706 aa12.97□□□□□ -0.33
GPN3-201ENST00000228827 WDR93Q6P2C0 686 aa12.97□□□□□ -0.33
GPN3-201ENST00000228827 TMEM81Q6P7N7 255 aa12.97□□□□□ -0.33
GPN3-201ENST00000228827 WDR53Q7Z5U6 358 aaPredicted RBP12.97□□□□□ -0.33
GPN3-201ENST00000228827 LIX1LQ8IVB5 337 aa12.97□□□□□ -0.33
GPN3-201ENST00000228827 TWIST2Q8WVJ9 160 aa12.97□□□□□ -0.33
GPN3-201ENST00000228827 CAVIN3Q969G5 261 aa12.97□□□□□ -0.33
GPN3-201ENST00000228827 ZBTB9Q96C00 473 aa12.97□□□□□ -0.33
GPN3-201ENST00000228827 SLC35A4Q96G79 324 aa12.97□□□□□ -0.33
GPN3-201ENST00000228827 TSSK3Q96PN8 268 aa12.97□□□□□ -0.33
GPN3-201ENST00000228827 UGT2B28Q9BY64 529 aa12.97□□□□□ -0.33
GPN3-201ENST00000228827 TAS2R7Q9NYW3 318 aa12.97□□□□□ -0.33
GPN3-201ENST00000228827 BAIAP2L1Q9UHR4 511 aa12.97□□□□□ -0.33
GPN3-201ENST00000228827 C19orf53Q9UNZ5 99 aaPredicted RBP12.97□□□□□ -0.33
GPN3-201ENST00000228827 WBP11Q9Y2W2 641 aaKnown RBP12.97□□□□□ -0.33
GPN3-201ENST00000228827 DNAJC15Q9Y5T4 150 aa12.97□□□□□ -0.33
GPN3-201ENST00000228827 A0A087WV62 115 aa12.97□□□□□ -0.33
GPN3-201ENST00000228827 UPK1AO00322 258 aa12.97□□□□□ -0.33
GPN3-201ENST00000228827 PIP5K1BO14986 540 aa12.97□□□□□ -0.33
GPN3-201ENST00000228827 NEFHP12036 1026 aa12.97□□□□□ -0.33
GPN3-201ENST00000228827 SDC1P18827 310 aa12.97□□□□□ -0.33
GPN3-201ENST00000228827 TCEA1P23193 301 aaKnown RBP12.97□□□□□ -0.33
GPN3-201ENST00000228827 MSX1P28360 303 aa12.97□□□□□ -0.33
GPN3-201ENST00000228827 PSG6Q00889 435 aa12.97□□□□□ -0.33
GPN3-201ENST00000228827 HSPB3Q12988 150 aa12.97□□□□□ -0.33
GPN3-201ENST00000228827 SNTA1Q13424 505 aa12.97□□□□□ -0.33
GPN3-201ENST00000228827 EFR3AQ14156 821 aa12.97□□□□□ -0.33
GPN3-201ENST00000228827 ACSF3Q4G176 576 aaPredicted RBP12.97□□□□□ -0.33
GPN3-201ENST00000228827 ZNF385BQ569K4 471 aa12.97□□□□□ -0.33
GPN3-201ENST00000228827 RIPPLY2Q5TAB7 128 aa12.97□□□□□ -0.33
GPN3-201ENST00000228827 VASNQ6EMK4 673 aa12.97□□□□□ -0.33
GPN3-201ENST00000228827 OR5M10Q6IEU7 315 aa12.97□□□□□ -0.33
GPN3-201ENST00000228827 SEM1Q6ZVN7 128 aa12.97□□□□□ -0.33
GPN3-201ENST00000228827 ZNF551Q7Z340 670 aaPredicted RBP12.97□□□□□ -0.33
GPN3-201ENST00000228827 WDSUB1Q8N9V3 476 aa12.97□□□□□ -0.33
GPN3-201ENST00000228827 OR14L1PQ8NHC6 308 aa12.97□□□□□ -0.33
GPN3-201ENST00000228827 ABTB1Q969K4 478 aaPredicted RBP12.97□□□□□ -0.33
GPN3-201ENST00000228827 CIDECQ96AQ7 238 aaPredicted RBP12.97□□□□□ -0.33
GPN3-201ENST00000228827 ELP4Q96EB1 424 aa12.97□□□□□ -0.33
GPN3-201ENST00000228827 METTL2AQ96IZ6 378 aaKnown RBP12.97□□□□□ -0.33
GPN3-201ENST00000228827 GIMAP2Q9UG22 337 aa12.97□□□□□ -0.33
GPN3-201ENST00000228827 TRAF6Q9Y4K3 522 aa12.97□□□□□ -0.33
GPN3-201ENST00000228827 PCDHGB3Q9Y5G1 929 aa12.97□□□□□ -0.33
GPN3-201ENST00000228827 FBN2P35556 2912 aa12.97□□□□□ -0.33
GPN3-201ENST00000228827 C17orf51A8MQB3 221 aa12.96□□□□□ -0.34
GPN3-201ENST00000228827 FAM47E-STBD1D6RA91 191 aa12.96□□□□□ -0.34
GPN3-201ENST00000228827 NPIPB8E9PQR5 432 aa12.96□□□□□ -0.34
GPN3-201ENST00000228827 PLOD2O00469 737 aa12.96□□□□□ -0.34
GPN3-201ENST00000228827 LSM1O15116 133 aaKnown RBP12.96□□□□□ -0.34
GPN3-201ENST00000228827 PDPK1O15530 556 aa12.96□□□□□ -0.34
GPN3-201ENST00000228827 CYP4B1P13584 511 aa12.96□□□□□ -0.34
GPN3-201ENST00000228827 SSTR2P30874 369 aa12.96□□□□□ -0.34
GPN3-201ENST00000228827 GPC1P35052 558 aa12.96□□□□□ -0.34
GPN3-201ENST00000228827 RFX3P48380 749 aa12.96□□□□□ -0.34
GPN3-201ENST00000228827 PNLIPRP2P54317 469 aa12.96□□□□□ -0.34
GPN3-201ENST00000228827 PLCZ1Q86YW0 608 aa12.96□□□□□ -0.34
GPN3-201ENST00000228827 PM20D2Q8IYS1 436 aa12.96□□□□□ -0.34
GPN3-201ENST00000228827 CLYBLQ8N0X4 340 aa12.96□□□□□ -0.34
GPN3-201ENST00000228827 OR2L13Q8N349 312 aa12.96□□□□□ -0.34
GPN3-201ENST00000228827 ACBD4Q8NC06 268 aa12.96□□□□□ -0.34
GPN3-201ENST00000228827 TNIP2Q8NFZ5 429 aa12.96□□□□□ -0.34
GPN3-201ENST00000228827 PPCDCQ96CD2 204 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms