RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Serpinb9gQ8VHQ1 377 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Camk1gQ91VB2 477 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Atg13Q91YI1 516 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Elmod3Q91YP6 381 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Bbox1Q924Y0 387 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Tspan1Q99J59 240 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Tmed9Q99KF1 235 aaKnown RBP12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Rwdd2bQ99M03 290 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Atp5oQ9DB20 213 aaKnown RBP12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Kcnj10Q9JM63 379 aa12.71□□□□□ -0.37
Nup88-201ENSMUST00000035283 Cfap77A0A087WRI3 283 aa12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 Tmem215A7E1Z1 235 aa12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 Adamts3E9Q287 1204 aa12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 Olfr746E9Q840 314 aa12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 Gm597E9Q8J5 896 aa12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 H2al1oL7MU04 110 aa12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 Vmn2r93L7N1Z9 857 aa12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 Aldh1a7O35945 501 aa12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 Zw10O54692 779 aa12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 CaskO70589 926 aa12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 Zp2P20239 713 aa12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 Hsd3b2P26149 373 aa12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 LipcP27656 510 aa12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 Pebp1P70296 187 aaKnown RBP12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 FuzQ3UYI6 415 aa12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 Nt5eQ61503 576 aa12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 Pabpc2Q62029 628 aa12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 Nlgn2Q69ZK9 836 aa12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 GnptgQ6S5C2 307 aa12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 Olfr128Q7TRJ1 308 aa12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 Tm9sf4Q8BH24 643 aa12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 Ptpn7Q8BUM3 359 aa12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 Olfr649Q8VGW1 312 aa12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 Fam3cQ91VU0 227 aa12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 Tmem159Q922Z1 161 aa12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 Txndc17Q9CQM5 123 aa12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 Khdc3Q9CWU5 440 aa12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 Acad8Q9D7B6 413 aa12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 Ift22Q9DAI2 185 aa12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 Dyrk1bQ9Z188 629 aa12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 Col24a1Q30D77 1733 aa12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 Gm7145A0A087WS64 360 aa12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 Hs3st4D3YVV6 449 aa12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 Gm5571P01639 130 aa12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 Fmo1P50285 532 aa12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 Ddx5Q61656 614 aaKnown RBP12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 Poldip3Q8BG81 420 aaKnown RBP12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 Arl15Q8BGR6 204 aa12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 Ostm1Q8BGT0 338 aa12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 Galnt12Q8BGT9 576 aa12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 Nod1Q8BHB0 953 aa12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 NdnfQ8C119 568 aa12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 Pex5lQ8C437 567 aa12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 Tmem268Q8R239 342 aa12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 Olfr342Q8VGK7 312 aa12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 MrgprhQ99MT8 321 aa12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 Fam166aQ9D4K5 319 aa12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 Mgat4dQ9D4R2 373 aa12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 SrpraQ9DBG7 636 aaKnown RBP12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 Ssr3Q9DCF9 185 aa12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 Emc7Q9EP72 241 aa12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 Vmn1r52Q9EP79 309 aa12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 Fem1aaQ9Z2G1 654 aa12.7□□□□□ -0.38
Nup88-201ENSMUST00000035283 Dmrtb1A2A9I7 359 aa12.69□□□□□ -0.38
Nup88-201ENSMUST00000035283 Mamdc4A2AJA7 1228 aa12.69□□□□□ -0.38
Nup88-201ENSMUST00000035283 Olfr640E9Q7P5 314 aa12.69□□□□□ -0.38
Nup88-201ENSMUST00000035283 Gm29394H3BIW7 199 aa12.69□□□□□ -0.38
Nup88-201ENSMUST00000035283 Slc22a1O08966 556 aa12.69□□□□□ -0.38
Nup88-201ENSMUST00000035283 Gcm2O09102 504 aa12.69□□□□□ -0.38
Nup88-201ENSMUST00000035283 Tgfb3P17125 410 aa12.69□□□□□ -0.38
Nup88-201ENSMUST00000035283 Syt4P40749 425 aa12.69□□□□□ -0.38
Nup88-201ENSMUST00000035283 CamkmtQ3U2J5 323 aa12.69□□□□□ -0.38
Nup88-201ENSMUST00000035283 Ugt8Q64676 541 aa12.69□□□□□ -0.38
Nup88-201ENSMUST00000035283 ToxQ66JW3 526 aa12.69□□□□□ -0.38
Nup88-201ENSMUST00000035283 Q6P1I3 445 aa12.69□□□□□ -0.38
Nup88-201ENSMUST00000035283 Ppp2r1bQ7TNP2 601 aaKnown RBP12.69□□□□□ -0.38
Nup88-201ENSMUST00000035283 Tmem202Q80W35 275 aa12.69□□□□□ -0.38
Nup88-201ENSMUST00000035283 McubQ810S1 345 aa12.69□□□□□ -0.38
Nup88-201ENSMUST00000035283 Slc35f1Q8BGK5 408 aa12.69□□□□□ -0.38
Nup88-201ENSMUST00000035283 Fam92aQ8BP22 355 aa12.69□□□□□ -0.38
Nup88-201ENSMUST00000035283 Ssuh2Q8C3L1 340 aa12.69□□□□□ -0.38
Nup88-201ENSMUST00000035283 Tmem163Q8C996 288 aa12.69□□□□□ -0.38
Nup88-201ENSMUST00000035283 Olfr669Q8VGU9 317 aa12.69□□□□□ -0.38
Nup88-201ENSMUST00000035283 Slc35b3Q922Q5 369 aa12.69□□□□□ -0.38
Nup88-201ENSMUST00000035283 FopnlQ9CZS3 174 aa12.69□□□□□ -0.38
Nup88-201ENSMUST00000035283 Ppil3Q9D6L8 161 aa12.69□□□□□ -0.38
Nup88-201ENSMUST00000035283 Aldh7a1Q9DBF1 539 aa12.69□□□□□ -0.38
Nup88-201ENSMUST00000035283 Eif3fQ9DCH4 361 aa12.69□□□□□ -0.38
Nup88-201ENSMUST00000035283 Ralgps2Q9ERD6 590 aa12.69□□□□□ -0.38
Nup88-201ENSMUST00000035283 PfkpQ9WUA3 784 aaKnown RBP12.69□□□□□ -0.38
Nup88-201ENSMUST00000035283 Scn5aQ9JJV9 2019 aa12.69□□□□□ -0.38
Nup88-201ENSMUST00000035283 Chd3B1AR17 2055 aa12.69□□□□□ -0.38
Nup88-201ENSMUST00000035283 Trbc2A0A075B5J4 173 aa12.69□□□□□ -0.38
Nup88-201ENSMUST00000035283 Trbc1A0A0A6YWV4 173 aa12.69□□□□□ -0.38
Nup88-201ENSMUST00000035283 Vmn1r12G5E8G1 307 aa12.69□□□□□ -0.38
Nup88-201ENSMUST00000035283 Klrg1O88713 188 aa12.69□□□□□ -0.38
Nup88-201ENSMUST00000035283 Polr2lP62876 67 aa12.69□□□□□ -0.38
Nup88-201ENSMUST00000035283 C1qaP98086 245 aa12.69□□□□□ -0.38
Nup88-201ENSMUST00000035283 HgfQ08048 728 aa12.69□□□□□ -0.38
Nup88-201ENSMUST00000035283 Klhl21Q3U410 597 aa12.69□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 122.7 ms