RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 Lrch3Q8BVU0 778 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Asrgl1Q8C0M9 326 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Adhfe1Q8R0N6 465 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Cys1Q8R4T1 145 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Aco2Q99KI0 780 aaKnown RBP10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Gm26657Q9CVR1 127 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Zcchc10Q9CX48 178 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Plekhj1Q9D240 164 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Tpk1Q9R0M5 243 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Myh9Q8VDD5 1960 aaKnown RBP10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 4930402K13RikB1AW18 415 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 FlgP11088 336 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Lef1P27782 397 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 HmgclP38060 325 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Ppp3r2Q63811 179 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Lrit2Q6PFC5 549 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Slc25a44Q8BGF9 314 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Eif5a2Q8BGY2 153 aaKnown RBP10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Prps1l1Q8C5R8 318 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Mchr1Q8JZL2 353 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 FbrsQ8R089 466 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Vmn1r185Q8R299 319 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Olfr61Q8VGM2 311 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Prdm9Q96EQ9 843 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Acer3Q9D099 267 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Actr6Q9D864 396 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Tyk2Q9R117 1184 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Gm16432A0A0A6YXX9 775 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Aldoart2A6ZI47 364 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Gm21876F6XK35 94 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Hbb-bh0P04443 147 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Ercc1P07903 298 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 CskP41241 450 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Igfbp1P47876 272 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 BckdhaP50136 442 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Ube2nP61089 152 aaKnown RBP10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Tmem63bQ3TWI9 832 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 SctrQ5FWI2 447 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Sox19Q62249 55 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Cdk3Q80YP0 303 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Tmem62Q8BXJ9 643 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Olfr998Q8VF76 314 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Cdhr1Q8VHP6 859 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 EtfaQ99LC5 333 aaKnown RBP10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Lrrc18Q9CQ07 262 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Aaed1Q9D1A0 226 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Tmem35aQ9D328 167 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Dapl1Q9D757 107 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Cmtm2aQ9DAR1 169 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Olfr1150-ps1A0A1L1STL1 316 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Hsbp1l1B2RXB2 72 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Cd209fD3Z1H5 274 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Vmn2r116E9Q6I0 856 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Gm4181E9Q7X3 184 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Rps2P25444 293 aaKnown RBP10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Apoc1P34928 88 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Ffar3Q3UFD7 319 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 6430531B16RikQ3V2J1 307 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Gpr165Q3V3A3 455 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Clns1aQ61189 236 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Mfsd13aQ6PDE8 519 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Kng2Q6S9I3 644 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Cpped1Q8BFS6 312 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Lrrtm2Q8BGA3 515 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Ttc34Q8C0Q3 554 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Lrrn3Q8CBC6 707 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Olfr401Q8VFX6 315 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Olfr1250Q8VGM3 314 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 St3gal4Q91Y74 333 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Ptgr1Q91YR9 329 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Fads1Q920L1 447 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Acot12Q9DBK0 556 aa10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Eif4hQ9WUK2 248 aaKnown RBP10.33□□□□□ -0.76
Ciita-201ENSMUST00000023147 Kntc1Q8C3Y4 2207 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 6720489N17RikA0A1Y7VJW0 127 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Gm8334F7CD45 553 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Ldb2O55203 373 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Tcte3P11985 191 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Atp1b2P14231 290 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Zfp37P17141 594 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 MaxP28574 160 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Ccr3P51678 359 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Cnn2Q08093 305 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 E330014E10RikQ3UL33 481 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 D5Ertd577eQ499F0 481 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Dcdc2Q5DU00 475 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 TefmQ5SSK3 364 aaKnown RBP10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Bdkrb1Q61125 334 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Crtc1Q68ED7 630 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Fam98bQ80VD1 429 aaKnown RBP10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Vmn2r81Q80Z09 865 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Pou6f2Q8BJI4 691 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Kcnc4Q8R1C0 628 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Ppp1r8Q8R3G1 351 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Olfr691Q8VGW5 322 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Gtpbp3Q923K4 492 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Fam69bQ99ML4 431 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Plscr2Q9DCW2 307 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 Rhox2dW4VSN9 191 aa10.32□□□□□ -0.76
Ciita-201ENSMUST00000023147 A0A286YDM2 672 aa10.32□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 36.6 ms