RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 KERAO60938 352 aa11.22□□□□□ -0.61
RBFOX1-224ENST00000641259 TFP02787 698 aa11.22□□□□□ -0.61
RBFOX1-224ENST00000641259 ITPKAP23677 461 aa11.22□□□□□ -0.61
RBFOX1-224ENST00000641259 MAOBP27338 520 aa11.22□□□□□ -0.61
RBFOX1-224ENST00000641259 HLA-DMAP28067 261 aa11.22□□□□□ -0.61
RBFOX1-224ENST00000641259 HOXA9P31269 272 aa11.22□□□□□ -0.61
RBFOX1-224ENST00000641259 HMGCLP35914 325 aa11.22□□□□□ -0.61
RBFOX1-224ENST00000641259 GGT2P36268 569 aa11.22□□□□□ -0.61
RBFOX1-224ENST00000641259 RPS25P62851 125 aaKnown RBP11.22□□□□□ -0.61
RBFOX1-224ENST00000641259 SSX1Q16384 188 aa11.22□□□□□ -0.61
RBFOX1-224ENST00000641259 GPALPP1Q8IXQ4 340 aa11.22□□□□□ -0.61
RBFOX1-224ENST00000641259 RGL4Q8IZJ4 473 aa11.22□□□□□ -0.61
RBFOX1-224ENST00000641259 OR5J2Q8NH18 312 aa11.22□□□□□ -0.61
RBFOX1-224ENST00000641259 TXNL4BQ9NX01 149 aaKnown RBP11.22□□□□□ -0.61
RBFOX1-224ENST00000641259 SH3D21A4FU49 640 aa11.21□□□□□ -0.61
RBFOX1-224ENST00000641259 ZNF705EA8MWA4 302 aaPredicted RBP11.21□□□□□ -0.61
RBFOX1-224ENST00000641259 MAGEB17A8MXT2 336 aa11.21□□□□□ -0.61
RBFOX1-224ENST00000641259 OTCP00480 354 aa11.21□□□□□ -0.61
RBFOX1-224ENST00000641259 STC1P52823 247 aa11.21□□□□□ -0.61
RBFOX1-224ENST00000641259 NAE1Q13564 534 aa11.21□□□□□ -0.61
RBFOX1-224ENST00000641259 COL28A1Q2UY09 1125 aa11.21□□□□□ -0.61
RBFOX1-224ENST00000641259 LRRC73Q5JTD7 316 aa11.21□□□□□ -0.61
RBFOX1-224ENST00000641259 LY6G5CQ5SRR4 150 aa11.21□□□□□ -0.61
RBFOX1-224ENST00000641259 C18orf63Q68DL7 685 aa11.21□□□□□ -0.61
RBFOX1-224ENST00000641259 CLDN19Q8N6F1 224 aa11.21□□□□□ -0.61
RBFOX1-224ENST00000641259 CLRN3Q8NCR9 226 aa11.21□□□□□ -0.61
RBFOX1-224ENST00000641259 GPR150Q8NGU9 434 aa11.21□□□□□ -0.61
RBFOX1-224ENST00000641259 L3HYPDHQ96EM0 354 aa11.21□□□□□ -0.61
RBFOX1-224ENST00000641259 MTERF1Q99551 399 aaKnown RBP11.21□□□□□ -0.61
RBFOX1-224ENST00000641259 C3orf14Q9HBI5 128 aa11.21□□□□□ -0.61
RBFOX1-224ENST00000641259 ATXN7L1Q9ULK2 861 aaPredicted RBP11.21□□□□□ -0.61
RBFOX1-224ENST00000641259 FZD4Q9ULV1 537 aa11.21□□□□□ -0.61
RBFOX1-224ENST00000641259 PRICKLE3O43900 615 aaPredicted RBP11.21□□□□□ -0.61
RBFOX1-224ENST00000641259 MTHFD2P13995 350 aa11.21□□□□□ -0.61
RBFOX1-224ENST00000641259 TYRP14679 529 aa11.21□□□□□ -0.61
RBFOX1-224ENST00000641259 TACR1P25103 407 aa11.21□□□□□ -0.61
RBFOX1-224ENST00000641259 ARFIP1P53367 373 aa11.21□□□□□ -0.61
RBFOX1-224ENST00000641259 SLC14A1Q13336 389 aa11.21□□□□□ -0.61
RBFOX1-224ENST00000641259 GPR176Q14439 515 aa11.21□□□□□ -0.61
RBFOX1-224ENST00000641259 FAM198BQ6UWH4 519 aa11.21□□□□□ -0.61
RBFOX1-224ENST00000641259 GOLGA7Q7Z5G4 137 aa11.21□□□□□ -0.61
RBFOX1-224ENST00000641259 KIAA0907Q7Z7F0 614 aaPredicted RBP11.21□□□□□ -0.61
RBFOX1-224ENST00000641259 PHYKPLQ8IUZ5 450 aa11.21□□□□□ -0.61
RBFOX1-224ENST00000641259 CHPFQ8IZ52 775 aa11.21□□□□□ -0.61
RBFOX1-224ENST00000641259 OR7G3Q8NG95 312 aa11.21□□□□□ -0.61
RBFOX1-224ENST00000641259 GIMAP1Q8WWP7 306 aa11.21□□□□□ -0.61
RBFOX1-224ENST00000641259 UBXN10Q96LJ8 280 aa11.21□□□□□ -0.61
RBFOX1-224ENST00000641259 TREX2Q9BQ50 279 aaPredicted RBP11.21□□□□□ -0.61
RBFOX1-224ENST00000641259 CD244Q9BZW8 370 aa11.21□□□□□ -0.61
RBFOX1-224ENST00000641259 ZNF436Q9C0F3 470 aaPredicted RBP11.21□□□□□ -0.61
RBFOX1-224ENST00000641259 TREM1Q9NP99 234 aa11.21□□□□□ -0.61
RBFOX1-224ENST00000641259 IL20RAQ9UHF4 553 aa11.21□□□□□ -0.61
RBFOX1-224ENST00000641259 SPAG17Q6Q759 2223 aa11.21□□□□□ -0.62
RBFOX1-224ENST00000641259 IQCMA0A1B0GVH7 501 aa11.21□□□□□ -0.62
RBFOX1-224ENST00000641259 LOC730098B7Z3J9 87 aa11.21□□□□□ -0.62
RBFOX1-224ENST00000641259 GAPDHSO14556 408 aaPredicted RBP11.21□□□□□ -0.62
RBFOX1-224ENST00000641259 FARS2O95363 451 aaKnown RBP11.21□□□□□ -0.62
RBFOX1-224ENST00000641259 ALPPP05187 535 aa11.21□□□□□ -0.62
RBFOX1-224ENST00000641259 RRASP10301 218 aa11.21□□□□□ -0.62
RBFOX1-224ENST00000641259 RBMS2Q15434 407 aaKnown RBP11.21□□□□□ -0.62
RBFOX1-224ENST00000641259 CDKN3Q16667 212 aa11.21□□□□□ -0.62
RBFOX1-224ENST00000641259 TCTE1Q5JU00 501 aa11.21□□□□□ -0.62
RBFOX1-224ENST00000641259 PLAG1Q6DJT9 500 aa11.21□□□□□ -0.62
RBFOX1-224ENST00000641259 GPR149Q86SP6 731 aa11.21□□□□□ -0.62
RBFOX1-224ENST00000641259 ADIPOR2Q86V24 386 aa11.21□□□□□ -0.62
RBFOX1-224ENST00000641259 C12orf40Q86WS4 652 aa11.21□□□□□ -0.62
RBFOX1-224ENST00000641259 PDZD9Q8IXQ8 264 aa11.21□□□□□ -0.62
RBFOX1-224ENST00000641259 ADGRG2Q8IZP9 1017 aa11.21□□□□□ -0.62
RBFOX1-224ENST00000641259 CIDECQ96AQ7 238 aaPredicted RBP11.21□□□□□ -0.62
RBFOX1-224ENST00000641259 S100PBPQ96BU1 408 aa11.21□□□□□ -0.62
RBFOX1-224ENST00000641259 THAP7Q9BT49 309 aaPredicted RBP11.21□□□□□ -0.62
RBFOX1-224ENST00000641259 ADGRE3Q9BY15 652 aa11.21□□□□□ -0.62
RBFOX1-224ENST00000641259 TGIF2Q9GZN2 237 aa11.21□□□□□ -0.62
RBFOX1-224ENST00000641259 FLVCR2Q9UPI3 526 aa11.21□□□□□ -0.62
RBFOX1-224ENST00000641259 MGAT4DA6NG13 374 aa11.2□□□□□ -0.62
RBFOX1-224ENST00000641259 OTOL1A6NHN0 477 aaPredicted RBP11.2□□□□□ -0.62
RBFOX1-224ENST00000641259 FAM25EA8MYX2 175 aa11.2□□□□□ -0.62
RBFOX1-224ENST00000641259 CHP2O43745 196 aa11.2□□□□□ -0.62
RBFOX1-224ENST00000641259 FGF4P08620 206 aa11.2□□□□□ -0.62
RBFOX1-224ENST00000641259 BCKDHAP12694 445 aa11.2□□□□□ -0.62
RBFOX1-224ENST00000641259 FDXRP22570 491 aa11.2□□□□□ -0.62
RBFOX1-224ENST00000641259 PSMA3P25788 255 aa11.2□□□□□ -0.62
RBFOX1-224ENST00000641259 MC4RP32245 332 aa11.2□□□□□ -0.62
RBFOX1-224ENST00000641259 VIPR2P41587 438 aa11.2□□□□□ -0.62
RBFOX1-224ENST00000641259 MEOX2P50222 304 aa11.2□□□□□ -0.62
RBFOX1-224ENST00000641259 GPM6BQ13491 265 aa11.2□□□□□ -0.62
RBFOX1-224ENST00000641259 VMACQ2NL98 169 aa11.2□□□□□ -0.62
RBFOX1-224ENST00000641259 TSPAN33Q86UF1 283 aa11.2□□□□□ -0.62
RBFOX1-224ENST00000641259 PAQR7Q86WK9 346 aa11.2□□□□□ -0.62
RBFOX1-224ENST00000641259 ACOT12Q8WYK0 555 aa11.2□□□□□ -0.62
RBFOX1-224ENST00000641259 NR4A3Q92570 626 aa11.2□□□□□ -0.62
RBFOX1-224ENST00000641259 IRF7Q92985 503 aa11.2□□□□□ -0.62
RBFOX1-224ENST00000641259 MTG2Q9H4K7 406 aa11.2□□□□□ -0.62
RBFOX1-224ENST00000641259 SPHK2Q9NRA0 654 aa11.2□□□□□ -0.62
RBFOX1-224ENST00000641259 PCTPQ9UKL6 214 aa11.2□□□□□ -0.62
RBFOX1-224ENST00000641259 ACSL6Q9UKU0 697 aa11.2□□□□□ -0.62
RBFOX1-224ENST00000641259 ZNF106Q9H2Y7 1883 aaKnown RBP11.2□□□□□ -0.62
RBFOX1-224ENST00000641259 KHDRBS3O75525 346 aaKnown RBP11.2□□□□□ -0.62
RBFOX1-224ENST00000641259 PSMA6P60900 246 aaKnown RBP11.2□□□□□ -0.62
RBFOX1-224ENST00000641259 UBE2MP61081 183 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms