RNA–Protein interactions for RNA: ENST00000628018.2

CAPNS1-215, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-215ENST00000628018 AGXTP21549 392 aa23.18■■□□□ 1.3
CAPNS1-215ENST00000628018 EMDP50402 254 aa23.18■■□□□ 1.3
CAPNS1-215ENST00000628018 ELAVL1Q15717 326 aaKnown RBP23.18■■□□□ 1.3
CAPNS1-215ENST00000628018 LPCAT4Q643R3 524 aa23.18■■□□□ 1.3
CAPNS1-215ENST00000628018 VTCN1Q7Z7D3 282 aa23.18■■□□□ 1.3
CAPNS1-215ENST00000628018 AMIGO2Q86SJ2 522 aa23.18■■□□□ 1.3
CAPNS1-215ENST00000628018 TMEM151BQ8IW70 566 aa23.18■■□□□ 1.3
CAPNS1-215ENST00000628018 BBS10Q8TAM1 723 aa23.18■■□□□ 1.3
CAPNS1-215ENST00000628018 CDS1Q92903 461 aa23.18■■□□□ 1.3
CAPNS1-215ENST00000628018 FKBP10Q96AY3 582 aa23.18■■□□□ 1.3
CAPNS1-215ENST00000628018 TRNT1Q96Q11 434 aaKnown RBP23.18■■□□□ 1.3
CAPNS1-215ENST00000628018 CNPPD1Q9BV87 410 aa23.18■■□□□ 1.3
CAPNS1-215ENST00000628018 SEMA6AQ9H2E6 1030 aa23.18■■□□□ 1.3
CAPNS1-215ENST00000628018 DUSP22Q9NRW4 184 aa23.18■■□□□ 1.3
CAPNS1-215ENST00000628018 ERVK-19Q9WJR5 959 aa23.18■■□□□ 1.3
CAPNS1-215ENST00000628018 PCDHGA8Q9Y5G5 932 aa23.18■■□□□ 1.3
CAPNS1-215ENST00000628018 KIF26BQ2KJY2 2108 aa23.18■■□□□ 1.3
CAPNS1-215ENST00000628018 PRAMEF2O60811 474 aa23.18■■□□□ 1.3
CAPNS1-215ENST00000628018 ALOX5P09917 674 aa23.18■■□□□ 1.3
CAPNS1-215ENST00000628018 MAGEA2P43356 314 aa23.18■■□□□ 1.3
CAPNS1-215ENST00000628018 PGDP52209 483 aa23.18■■□□□ 1.3
CAPNS1-215ENST00000628018 ATP6AP1Q15904 470 aa23.18■■□□□ 1.3
CAPNS1-215ENST00000628018 DCAF12Q5T6F0 453 aa23.18■■□□□ 1.3
CAPNS1-215ENST00000628018 OGFRL1Q5TC84 451 aaPredicted RBP23.18■■□□□ 1.3
CAPNS1-215ENST00000628018 MRPL14Q6P1L8 145 aaKnown RBP23.18■■□□□ 1.3
CAPNS1-215ENST00000628018 SLCO6A1Q86UG4 719 aa23.18■■□□□ 1.3
CAPNS1-215ENST00000628018 DEFB124Q8NES8 71 aa23.18■■□□□ 1.3
CAPNS1-215ENST00000628018 TPD52L3Q96J77 140 aa23.18■■□□□ 1.3
CAPNS1-215ENST00000628018 DEPDC7Q96QD5 511 aa23.18■■□□□ 1.3
CAPNS1-215ENST00000628018 LMF2Q9BU23 707 aaKnown RBP23.18■■□□□ 1.3
CAPNS1-215ENST00000628018 ULBP3Q9BZM4 244 aa23.18■■□□□ 1.3
CAPNS1-215ENST00000628018 AKIRIN1Q9H9L7 192 aaPredicted RBP23.18■■□□□ 1.3
CAPNS1-215ENST00000628018 HEMK1Q9Y5R4 338 aaPredicted RBP23.18■■□□□ 1.3
CAPNS1-215ENST00000628018 GPC6Q9Y625 555 aaPredicted RBP23.18■■□□□ 1.3
CAPNS1-215ENST00000628018 A0A0G2JPF8 293 aa23.17■■□□□ 1.3
CAPNS1-215ENST00000628018 HNRNPCL2B2RXH8 293 aa23.17■■□□□ 1.3
CAPNS1-215ENST00000628018 HNRNPCL3B7ZW38 293 aa23.17■■□□□ 1.3
CAPNS1-215ENST00000628018 CNOT3O75175 753 aaKnown RBP23.17■■□□□ 1.3
CAPNS1-215ENST00000628018 DKK1O94907 266 aa23.17■■□□□ 1.3
CAPNS1-215ENST00000628018 MFN2O95140 757 aa23.17■■□□□ 1.3
CAPNS1-215ENST00000628018 H6PDO95479 791 aa23.17■■□□□ 1.3
CAPNS1-215ENST00000628018 CLPSP04118 112 aa23.17■■□□□ 1.3
CAPNS1-215ENST00000628018 HNRNPCL4P0DMR1 293 aa23.17■■□□□ 1.3
CAPNS1-215ENST00000628018 PEX2P28328 305 aa23.17■■□□□ 1.3
CAPNS1-215ENST00000628018 KCNJ10P78508 379 aa23.17■■□□□ 1.3
CAPNS1-215ENST00000628018 ARHGAP11BQ3KRB8 267 aa23.17■■□□□ 1.3
CAPNS1-215ENST00000628018 GPAT3Q53EU6 434 aa23.17■■□□□ 1.3
CAPNS1-215ENST00000628018 SHISA6Q6ZSJ9 500 aa23.17■■□□□ 1.3
CAPNS1-215ENST00000628018 C16orf62Q7Z3J2 963 aa23.17■■□□□ 1.3
CAPNS1-215ENST00000628018 ZNF615Q8N8J6 731 aa23.17■■□□□ 1.3
CAPNS1-215ENST00000628018 OR7G1Q8NGA0 311 aa23.17■■□□□ 1.3
CAPNS1-215ENST00000628018 ZNF607Q96SK3 696 aa23.17■■□□□ 1.3
CAPNS1-215ENST00000628018 BTBD2Q9BX70 525 aa23.17■■□□□ 1.3
CAPNS1-215ENST00000628018 OR10A5Q9H207 317 aa23.17■■□□□ 1.3
CAPNS1-215ENST00000628018 FOLH1BQ9HBA9 442 aa23.17■■□□□ 1.3
CAPNS1-215ENST00000628018 IL1RAPQ9NPH3 570 aa23.17■■□□□ 1.3
CAPNS1-215ENST00000628018 CALML5Q9NZT1 146 aa23.17■■□□□ 1.3
CAPNS1-215ENST00000628018 B3GALT1Q9Y5Z6 326 aa23.17■■□□□ 1.3
CAPNS1-215ENST00000628018 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.16■■□□□ 1.3
CAPNS1-215ENST00000628018 FAM149AA5PLN7 773 aa23.16■■□□□ 1.3
CAPNS1-215ENST00000628018 A8MVJ9 347 aa23.16■■□□□ 1.3
CAPNS1-215ENST00000628018 SOX30O94993 753 aa23.16■■□□□ 1.3
CAPNS1-215ENST00000628018 NKX2-2O95096 273 aa23.16■■□□□ 1.3
CAPNS1-215ENST00000628018 KLK3P07288 261 aaPredicted RBP23.16■■□□□ 1.3
CAPNS1-215ENST00000628018 ETS2P15036 469 aa23.16■■□□□ 1.3
CAPNS1-215ENST00000628018 LIMK1P53667 647 aa23.16■■□□□ 1.3
CAPNS1-215ENST00000628018 FOXL2P58012 376 aa23.16■■□□□ 1.3
CAPNS1-215ENST00000628018 ZNF155Q12901 538 aaPredicted RBP23.16■■□□□ 1.3
CAPNS1-215ENST00000628018 HES3Q5TGS1 186 aa23.16■■□□□ 1.3
CAPNS1-215ENST00000628018 FKBP9P1Q75LS8 142 aa23.16■■□□□ 1.3
CAPNS1-215ENST00000628018 OLIG3Q7RTU3 272 aa23.16■■□□□ 1.3
CAPNS1-215ENST00000628018 CHDHQ8NE62 594 aaPredicted RBP23.16■■□□□ 1.3
CAPNS1-215ENST00000628018 LZICQ8WZA0 190 aa23.16■■□□□ 1.3
CAPNS1-215ENST00000628018 CENPNQ96H22 339 aaPredicted RBP23.16■■□□□ 1.3
CAPNS1-215ENST00000628018 SENP5Q96HI0 755 aaPredicted RBP23.16■■□□□ 1.3
CAPNS1-215ENST00000628018 FBXL20Q96IG2 436 aa23.16■■□□□ 1.3
CAPNS1-215ENST00000628018 VSTM2LQ96N03 204 aa23.16■■□□□ 1.3
CAPNS1-215ENST00000628018 TAAR9Q96RI9 348 aa23.16■■□□□ 1.3
CAPNS1-215ENST00000628018 SPSB2Q99619 263 aa23.16■■□□□ 1.3
CAPNS1-215ENST00000628018 ZPBPQ9BS86 351 aa23.16■■□□□ 1.3
CAPNS1-215ENST00000628018 SLC38A1Q9H2H9 487 aa23.16■■□□□ 1.3
CAPNS1-215ENST00000628018 SOX17Q9H6I2 414 aaPredicted RBP23.16■■□□□ 1.3
CAPNS1-215ENST00000628018 PCDHGB3Q9Y5G1 929 aa23.16■■□□□ 1.3
CAPNS1-215ENST00000628018 MUC6Q6W4X9 2439 aa23.16■■□□□ 1.3
CAPNS1-215ENST00000628018 DSPPQ9NZW4 1301 aa23.15■■□□□ 1.3
CAPNS1-215ENST00000628018 A8MUA0 341 aa23.15■■□□□ 1.3
CAPNS1-215ENST00000628018 IDSB3KWA1 339 aa23.15■■□□□ 1.3
CAPNS1-215ENST00000628018 CLOCKO15516 846 aa23.15■■□□□ 1.3
CAPNS1-215ENST00000628018 DYRK3O43781 588 aa23.15■■□□□ 1.3
CAPNS1-215ENST00000628018 EIF3IQ13347 325 aaKnown RBP23.15■■□□□ 1.3
CAPNS1-215ENST00000628018 MLIPQ5VWP3 458 aa23.15■■□□□ 1.3
CAPNS1-215ENST00000628018 ZNF517Q6ZMY9 492 aaPredicted RBP23.15■■□□□ 1.3
CAPNS1-215ENST00000628018 DDA1Q9BW61 102 aa23.15■■□□□ 1.3
CAPNS1-215ENST00000628018 SATB2Q9UPW6 733 aa23.15■■□□□ 1.3
CAPNS1-215ENST00000628018 CLCA3PQ9Y6N3 262 aa23.15■■□□□ 1.3
CAPNS1-215ENST00000628018 PCNX2A6NKB5 2137 aa23.15■■□□□ 1.3
CAPNS1-215ENST00000628018 CCDC187A0A096LP49 1063 aa23.14■■□□□ 1.3
CAPNS1-215ENST00000628018 PMS2P1A4D2B8 440 aa23.14■■□□□ 1.3
CAPNS1-215ENST00000628018 SERPINB7O75635 380 aa23.14■■□□□ 1.3
CAPNS1-215ENST00000628018 LDLRP01130 860 aa23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms