RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 KRT15P19012 456 aa12.43□□□□□ -0.42
SNX1-214ENST00000625244 USF1P22415 310 aaPredicted RBP12.43□□□□□ -0.42
SNX1-214ENST00000625244 GZMKP49863 264 aa12.43□□□□□ -0.42
SNX1-214ENST00000625244 TERF1P54274 439 aa12.43□□□□□ -0.42
SNX1-214ENST00000625244 B3GALT5-AS1P59052 145 aa12.43□□□□□ -0.42
SNX1-214ENST00000625244 PPP1R3AQ16821 1122 aa12.43□□□□□ -0.42
SNX1-214ENST00000625244 PRAMEF9Q5VWM5 478 aa12.43□□□□□ -0.42
SNX1-214ENST00000625244 HIST2H2BDQ6DRA6 164 aa12.43□□□□□ -0.42
SNX1-214ENST00000625244 ZNF615Q8N8J6 731 aa12.43□□□□□ -0.42
SNX1-214ENST00000625244 SPATA4Q8NEY3 305 aa12.43□□□□□ -0.42
SNX1-214ENST00000625244 TANKQ92844 425 aa12.43□□□□□ -0.42
SNX1-214ENST00000625244 MSI2Q96DH6 328 aaKnown RBP12.43□□□□□ -0.42
SNX1-214ENST00000625244 TACO1Q9BSH4 297 aaKnown RBP12.43□□□□□ -0.42
SNX1-214ENST00000625244 SORBS1Q9BX66 1292 aaKnown RBP12.43□□□□□ -0.42
SNX1-214ENST00000625244 TRIM2Q9C040 744 aa12.43□□□□□ -0.42
SNX1-214ENST00000625244 GRIP2Q9C0E4 1043 aa12.43□□□□□ -0.42
SNX1-214ENST00000625244 C20orf96Q9NUD7 363 aaPredicted RBP12.43□□□□□ -0.42
SNX1-214ENST00000625244 MOCS1Q9NZB8 636 aa12.43□□□□□ -0.42
SNX1-214ENST00000625244 B4DXG7 233 aa12.42□□□□□ -0.42
SNX1-214ENST00000625244 DLX3O60479 287 aa12.42□□□□□ -0.42
SNX1-214ENST00000625244 SH3BGRLO75368 114 aa12.42□□□□□ -0.42
SNX1-214ENST00000625244 TNFRSF21O75509 655 aa12.42□□□□□ -0.42
SNX1-214ENST00000625244 PPM1BO75688 479 aa12.42□□□□□ -0.42
SNX1-214ENST00000625244 WDR47O94967 919 aa12.42□□□□□ -0.42
SNX1-214ENST00000625244 AIFM1O95831 613 aa12.42□□□□□ -0.42
SNX1-214ENST00000625244 TPSB2P20231 275 aa12.42□□□□□ -0.42
SNX1-214ENST00000625244 GABRB3P28472 473 aa12.42□□□□□ -0.42
SNX1-214ENST00000625244 COMPP49747 757 aaPredicted RBP12.42□□□□□ -0.42
SNX1-214ENST00000625244 SLAMF1Q13291 335 aa12.42□□□□□ -0.42
SNX1-214ENST00000625244 SNTA1Q13424 505 aa12.42□□□□□ -0.42
SNX1-214ENST00000625244 PON3Q15166 354 aa12.42□□□□□ -0.42
SNX1-214ENST00000625244 TPSAB1Q15661 275 aa12.42□□□□□ -0.42
SNX1-214ENST00000625244 NNATQ16517 81 aa12.42□□□□□ -0.42
SNX1-214ENST00000625244 HSP90AA5PQ58FG0 334 aa12.42□□□□□ -0.42
SNX1-214ENST00000625244 GPSM1Q86YR5 675 aa12.42□□□□□ -0.42
SNX1-214ENST00000625244 PLCZ1Q86YW0 608 aa12.42□□□□□ -0.42
SNX1-214ENST00000625244 C10orf105Q8TEF2 133 aa12.42□□□□□ -0.42
SNX1-214ENST00000625244 S100PBPQ96BU1 408 aa12.42□□□□□ -0.42
SNX1-214ENST00000625244 VPS39Q96JC1 886 aa12.42□□□□□ -0.42
SNX1-214ENST00000625244 ADAD1Q96M93 576 aaKnown RBP12.42□□□□□ -0.42
SNX1-214ENST00000625244 PITHD1Q9GZP4 211 aaPredicted RBP12.42□□□□□ -0.42
SNX1-214ENST00000625244 NXF5Q9H1B4 397 aaKnown RBP12.42□□□□□ -0.42
SNX1-214ENST00000625244 IARS2Q9NSE4 1012 aaKnown RBP12.42□□□□□ -0.42
SNX1-214ENST00000625244 WHRNQ9P202 907 aa12.42□□□□□ -0.42
SNX1-214ENST00000625244 GPR52Q9Y2T5 361 aa12.42□□□□□ -0.42
SNX1-214ENST00000625244 A0A1W2PS29 197 aa12.41□□□□□ -0.42
SNX1-214ENST00000625244 PRAMEF25A6NGN4 478 aa12.41□□□□□ -0.42
SNX1-214ENST00000625244 UGT2B11O75310 529 aa12.41□□□□□ -0.42
SNX1-214ENST00000625244 AQP8O94778 261 aa12.41□□□□□ -0.42
SNX1-214ENST00000625244 VENTXO95231 258 aa12.41□□□□□ -0.42
SNX1-214ENST00000625244 GPR75O95800 540 aa12.41□□□□□ -0.42
SNX1-214ENST00000625244 CT62P0C5K7 136 aa12.41□□□□□ -0.42
SNX1-214ENST00000625244 NEK2P51955 445 aa12.41□□□□□ -0.42
SNX1-214ENST00000625244 C2orf54Q08AI8 447 aa12.41□□□□□ -0.42
SNX1-214ENST00000625244 AP5B1Q2VPB7 878 aa12.41□□□□□ -0.42
SNX1-214ENST00000625244 OR5M10Q6IEU7 315 aa12.41□□□□□ -0.42
SNX1-214ENST00000625244 NUP54Q7Z3B4 507 aa12.41□□□□□ -0.42
SNX1-214ENST00000625244 LMNTD2Q8IXW0 634 aa12.41□□□□□ -0.42
SNX1-214ENST00000625244 PPIL6Q8IXY8 311 aa12.41□□□□□ -0.42
SNX1-214ENST00000625244 CALML6Q8TD86 181 aa12.41□□□□□ -0.42
SNX1-214ENST00000625244 ANKRD7Q92527 254 aa12.41□□□□□ -0.42
SNX1-214ENST00000625244 FAM168AQ92567 244 aa12.41□□□□□ -0.42
SNX1-214ENST00000625244 PROX1Q92786 737 aa12.41□□□□□ -0.42
SNX1-214ENST00000625244 PELOQ9BRX2 385 aaKnown RBP12.41□□□□□ -0.42
SNX1-214ENST00000625244 CACNG6Q9BXT2 260 aa12.41□□□□□ -0.42
SNX1-214ENST00000625244 MS4A8Q9BY19 250 aa12.41□□□□□ -0.42
SNX1-214ENST00000625244 OR10A5Q9H207 317 aa12.41□□□□□ -0.42
SNX1-214ENST00000625244 OR10A4Q9H209 315 aa12.41□□□□□ -0.42
SNX1-214ENST00000625244 CXorf21Q9HAI6 301 aa12.41□□□□□ -0.42
SNX1-214ENST00000625244 CISD1Q9NZ45 108 aaKnown RBP12.41□□□□□ -0.42
SNX1-214ENST00000625244 EHD3Q9NZN3 535 aa12.41□□□□□ -0.42
SNX1-214ENST00000625244 DKKL1Q9UK85 242 aa12.41□□□□□ -0.42
SNX1-214ENST00000625244 CLEC4AQ9UMR7 237 aa12.41□□□□□ -0.42
SNX1-214ENST00000625244 MRPS18CQ9Y3D5 142 aaKnown RBP12.41□□□□□ -0.42
SNX1-214ENST00000625244 ZNF175Q9Y473 711 aa12.41□□□□□ -0.42
SNX1-214ENST00000625244 PLCE1Q9P212 2302 aa12.4□□□□□ -0.42
SNX1-214ENST00000625244 FAM187AA6NFU0 413 aa12.4□□□□□ -0.42
SNX1-214ENST00000625244 GLOD5A6NK44 160 aa12.4□□□□□ -0.42
SNX1-214ENST00000625244 SAP18O00422 153 aaKnown RBP12.4□□□□□ -0.42
SNX1-214ENST00000625244 SEC14L5O43304 696 aa12.4□□□□□ -0.42
SNX1-214ENST00000625244 RAMP1O60894 148 aa12.4□□□□□ -0.42
SNX1-214ENST00000625244 PEPDP12955 493 aa12.4□□□□□ -0.42
SNX1-214ENST00000625244 NAGAP17050 411 aa12.4□□□□□ -0.42
SNX1-214ENST00000625244 CD22P20273 847 aa12.4□□□□□ -0.42
SNX1-214ENST00000625244 PSMB1P20618 241 aaKnown RBP12.4□□□□□ -0.42
SNX1-214ENST00000625244 GALNSP34059 522 aa12.4□□□□□ -0.42
SNX1-214ENST00000625244 SSR2P43308 183 aa12.4□□□□□ -0.42
SNX1-214ENST00000625244 HNRNPH2P55795 449 aaKnown RBP12.4□□□□□ -0.42
SNX1-214ENST00000625244 C21orf58P58505 322 aa12.4□□□□□ -0.42
SNX1-214ENST00000625244 HMGCS1Q01581 520 aa12.4□□□□□ -0.42
SNX1-214ENST00000625244 TNFRSF17Q02223 184 aa12.4□□□□□ -0.42
SNX1-214ENST00000625244 BSPH1Q075Z2 132 aa12.4□□□□□ -0.42
SNX1-214ENST00000625244 TSC22D1Q15714 1073 aa12.4□□□□□ -0.42
SNX1-214ENST00000625244 CR1LQ2VPA4 569 aa12.4□□□□□ -0.42
SNX1-214ENST00000625244 PRR31Q5SQ13 230 aa12.4□□□□□ -0.42
SNX1-214ENST00000625244 ARMC3Q5W041 872 aa12.4□□□□□ -0.42
SNX1-214ENST00000625244 GPR180Q86V85 440 aa12.4□□□□□ -0.42
SNX1-214ENST00000625244 ZNF619Q8N2I2 560 aa12.4□□□□□ -0.42
SNX1-214ENST00000625244 CEP112Q8N8E3 955 aa12.4□□□□□ -0.42
SNX1-214ENST00000625244 C2CD4AQ8NCU7 369 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms