RNA–Protein interactions for RNA: ENST00000623466.1

PCDHB17P-202, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 3,066 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-202ENST00000623466 OTUB1Q96FW1 271 aaPredicted RBP12.65□□□□□ -0.38
PCDHB17P-202ENST00000623466 MAPKAP1Q9BPZ7 522 aa12.65□□□□□ -0.38
PCDHB17P-202ENST00000623466 PRSS16Q9NQE7 514 aa12.65□□□□□ -0.38
PCDHB17P-202ENST00000623466 TAC3Q9UHF0 121 aa12.65□□□□□ -0.38
PCDHB17P-202ENST00000623466 SLC23A1Q9UHI7 598 aa12.65□□□□□ -0.38
PCDHB17P-202ENST00000623466 SMLR1H3BR10 107 aa12.65□□□□□ -0.38
PCDHB17P-202ENST00000623466 H7BY64 318 aa12.65□□□□□ -0.38
PCDHB17P-202ENST00000623466 RNASET2O00584 256 aaKnown RBP12.65□□□□□ -0.38
PCDHB17P-202ENST00000623466 NUPL2O15504 423 aaKnown RBP12.65□□□□□ -0.38
PCDHB17P-202ENST00000623466 SEMA7AO75326 666 aa12.65□□□□□ -0.38
PCDHB17P-202ENST00000623466 HNRNPA1P09651 372 aaKnown RBP eCLIP12.65□□□□□ -0.38
PCDHB17P-202ENST00000623466 TSPAN19P0C672 248 aa12.65□□□□□ -0.38
PCDHB17P-202ENST00000623466 KIR2DL3P43628 341 aa12.65□□□□□ -0.38
PCDHB17P-202ENST00000623466 LIMS1P48059 325 aa12.65□□□□□ -0.38
PCDHB17P-202ENST00000623466 C2orf27AQ580R0 203 aa12.65□□□□□ -0.38
PCDHB17P-202ENST00000623466 PDZK1Q5T2W1 519 aa12.65□□□□□ -0.38
PCDHB17P-202ENST00000623466 GRHL2Q6ISB3 625 aa12.65□□□□□ -0.38
PCDHB17P-202ENST00000623466 OR52N2Q8NGI0 321 aa12.65□□□□□ -0.38
PCDHB17P-202ENST00000623466 SETD6Q8TBK2 473 aa12.65□□□□□ -0.38
PCDHB17P-202ENST00000623466 KLHL6Q8WZ60 621 aa12.65□□□□□ -0.38
PCDHB17P-202ENST00000623466 PRAP1Q96NZ9 151 aa12.65□□□□□ -0.38
PCDHB17P-202ENST00000623466 ZDHHC5Q9C0B5 715 aa12.65□□□□□ -0.38
PCDHB17P-202ENST00000623466 THSD1Q9NS62 852 aa12.65□□□□□ -0.38
PCDHB17P-202ENST00000623466 TVP23BQ9NYZ1 205 aa12.65□□□□□ -0.38
PCDHB17P-202ENST00000623466 ENOPH1Q9UHY7 261 aa12.65□□□□□ -0.38
PCDHB17P-202ENST00000623466 MTCL1Q9Y4B5 1905 aaKnown RBP12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 A0A0B4J203 849 aa12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 A0A1W2PP55 124 aa12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 PIPSLA2A3N6 862 aa12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 SH3D21A4FU49 640 aa12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 ZNF670-ZNF695F2Z2N8 137 aa12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 BTN3A3O00478 584 aa12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 IFNW1P05000 195 aa12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 SRPRAP08240 638 aaKnown RBP12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 KELP23276 732 aa12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 CSTF2P33240 577 aaKnown RBP eCLIP12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 SDC2P34741 201 aa12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 ZNF91Q05481 1191 aa12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 ELAVL3Q14576 367 aaKnown RBP12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 TMEM31Q5JXX7 168 aa12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 FIP1L1Q6UN15 594 aaKnown RBP12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 ERN2Q76MJ5 926 aaKnown RBP12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 OLIG3Q7RTU3 272 aa12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 ADCK2Q7Z695 626 aa12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 YIPF7Q8N8F6 280 aa12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 OR9A1PQ8NGU1 263 aa12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 CXorf40AQ8TE69 158 aa12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 TFGQ92734 400 aaPredicted RBP12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 SMARCD2Q92925 531 aa12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 RAB8BQ92930 207 aa12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 OTUB2Q96DC9 234 aa12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 SIPA1Q96FS4 1042 aa12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 C19orf43Q9BQ61 176 aa12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 SPATA9Q9BWV2 254 aa12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 TSSK6Q9BXA6 273 aa12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 REEP4Q9H6H4 257 aa12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 SLC25A19Q9HC21 320 aa12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 SCML1Q9UN30 329 aa12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 SSR3Q9UNL2 185 aa12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 TRBV23OR9-2A0A075B6M9 112 aa12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 TLX2O43763 284 aaPredicted RBP12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 NME6O75414 186 aaPredicted RBP12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 FGF19O95750 216 aa12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 GPC1P35052 558 aa12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 EEF1A2Q05639 463 aaKnown RBP12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 PSRC1Q6PGN9 363 aaPredicted RBP12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 DEF8Q6ZN54 512 aa12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 USP30Q70CQ3 517 aa12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 ZFP41Q8N8Y5 198 aa12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 MARVELD3Q96A59 401 aa12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 PPCDCQ96CD2 204 aa12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 F2RL3Q96RI0 385 aa12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 FAM83CQ9BQN1 747 aa12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 SLC22A4Q9H015 551 aa12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 TXNL4BQ9NX01 149 aaKnown RBP12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 B3GNT2Q9NY97 397 aa12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 STUB1Q9UNE7 303 aa12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 KCNK6Q9Y257 313 aa12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 DYRK1BQ9Y463 629 aa12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 CLCA3PQ9Y6N3 262 aa12.64□□□□□ -0.39
PCDHB17P-202ENST00000623466 MYO10Q9HD67 2058 aa12.63□□□□□ -0.39
PCDHB17P-202ENST00000623466 A0A1W2PRG6 482 aa12.63□□□□□ -0.39
PCDHB17P-202ENST00000623466 TSPAN11A1L157 253 aa12.63□□□□□ -0.39
PCDHB17P-202ENST00000623466 H0YIV9 168 aa12.63□□□□□ -0.39
PCDHB17P-202ENST00000623466 PAPLNO95428 1278 aa12.63□□□□□ -0.39
PCDHB17P-202ENST00000623466 ITGB7P26010 798 aa12.63□□□□□ -0.39
PCDHB17P-202ENST00000623466 APEX1P27695 318 aaKnown RBP12.63□□□□□ -0.39
PCDHB17P-202ENST00000623466 GJA4P35212 333 aa12.63□□□□□ -0.39
PCDHB17P-202ENST00000623466 BNC1Q01954 994 aa12.63□□□□□ -0.39
PCDHB17P-202ENST00000623466 WSCD2Q2TBF2 565 aa12.63□□□□□ -0.39
PCDHB17P-202ENST00000623466 OR2G6Q5TZ20 316 aa12.63□□□□□ -0.39
PCDHB17P-202ENST00000623466 ZNF770Q6IQ21 691 aaPredicted RBP12.63□□□□□ -0.39
PCDHB17P-202ENST00000623466 PRSS42Q7Z5A4 293 aa12.63□□□□□ -0.39
PCDHB17P-202ENST00000623466 CTPS2Q9NRF8 586 aa12.63□□□□□ -0.39
PCDHB17P-202ENST00000623466 CYB5R1Q9UHQ9 305 aa12.63□□□□□ -0.39
PCDHB17P-202ENST00000623466 YBX2Q9Y2T7 364 aaKnown RBP12.63□□□□□ -0.39
PCDHB17P-202ENST00000623466 PLA2G10O15496 165 aa12.63□□□□□ -0.39
PCDHB17P-202ENST00000623466 C1GALT1C1LP0DN25 315 aa12.63□□□□□ -0.39
PCDHB17P-202ENST00000623466 ACP5P13686 325 aa12.63□□□□□ -0.39
PCDHB17P-202ENST00000623466 CLCNKAP51800 687 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms