RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 FGF17O60258 216 aa15.3■□□□□ 0.04
LDB3-208ENST00000623007 STX11O75558 287 aa15.3■□□□□ 0.04
LDB3-208ENST00000623007 RECKO95980 971 aa15.3■□□□□ 0.04
LDB3-208ENST00000623007 ALPPL2P10696 532 aa15.3■□□□□ 0.04
LDB3-208ENST00000623007 ELAVL4P26378 380 aaKnown RBP15.3■□□□□ 0.04
LDB3-208ENST00000623007 ARL4DP49703 201 aa15.3■□□□□ 0.04
LDB3-208ENST00000623007 IGLV3-21P80748 117 aaPredicted RBP15.3■□□□□ 0.04
LDB3-208ENST00000623007 DUSP8Q13202 625 aa15.3■□□□□ 0.04
LDB3-208ENST00000623007 MEP1AQ16819 746 aa15.3■□□□□ 0.04
LDB3-208ENST00000623007 DEFB133Q30KQ1 61 aa15.3■□□□□ 0.04
LDB3-208ENST00000623007 LYSMD4Q5XG99 296 aa15.3■□□□□ 0.04
LDB3-208ENST00000623007 CD300LDQ6UXZ3 194 aa15.3■□□□□ 0.04
LDB3-208ENST00000623007 DEF8Q6ZN54 512 aa15.3■□□□□ 0.04
LDB3-208ENST00000623007 WDR5BQ86VZ2 330 aa15.3■□□□□ 0.04
LDB3-208ENST00000623007 SFTPA2Q8IWL1 248 aa15.3■□□□□ 0.04
LDB3-208ENST00000623007 AQP11Q8NBQ7 271 aa15.3■□□□□ 0.04
LDB3-208ENST00000623007 OR52J3Q8NH60 311 aa15.3■□□□□ 0.04
LDB3-208ENST00000623007 OIT3Q8WWZ8 545 aa15.3■□□□□ 0.04
LDB3-208ENST00000623007 HOXB13Q92826 284 aaPredicted RBP15.3■□□□□ 0.04
LDB3-208ENST00000623007 OTUB1Q96FW1 271 aaPredicted RBP15.3■□□□□ 0.04
LDB3-208ENST00000623007 C16orf58Q96GQ5 468 aa15.3■□□□□ 0.04
LDB3-208ENST00000623007 RBM18Q96H35 190 aaKnown RBP15.3■□□□□ 0.04
LDB3-208ENST00000623007 ARHGDIGQ99819 225 aa15.3■□□□□ 0.04
LDB3-208ENST00000623007 YIPF4Q9BSR8 244 aa15.3■□□□□ 0.04
LDB3-208ENST00000623007 POLR1BQ9H9Y6 1135 aa15.3■□□□□ 0.04
LDB3-208ENST00000623007 EQTNQ9NQ60 294 aa15.3■□□□□ 0.04
LDB3-208ENST00000623007 SEMA5BQ9P283 1151 aa15.3■□□□□ 0.04
LDB3-208ENST00000623007 CEPT1Q9Y6K0 416 aa15.3■□□□□ 0.04
LDB3-208ENST00000623007 SH3D21A4FU49 640 aa15.29■□□□□ 0.04
LDB3-208ENST00000623007 SGK494L7N484 410 aa15.29■□□□□ 0.04
LDB3-208ENST00000623007 DBIP07108 87 aaKnown RBP15.29■□□□□ 0.04
LDB3-208ENST00000623007 BCKDHBP21953 392 aa15.29■□□□□ 0.04
LDB3-208ENST00000623007 CTSKP43235 329 aa15.29■□□□□ 0.04
LDB3-208ENST00000623007 GABRA4P48169 554 aa15.29■□□□□ 0.04
LDB3-208ENST00000623007 CDH15P55291 814 aa15.29■□□□□ 0.04
LDB3-208ENST00000623007 PPP1CAP62136 330 aa15.29■□□□□ 0.04
LDB3-208ENST00000623007 HSD11B2P80365 405 aa15.29■□□□□ 0.04
LDB3-208ENST00000623007 ALDH6A1Q02252 535 aaKnown RBP15.29■□□□□ 0.04
LDB3-208ENST00000623007 FUT5Q11128 374 aa15.29■□□□□ 0.04
LDB3-208ENST00000623007 ST3GAL3Q11203 375 aa15.29■□□□□ 0.04
LDB3-208ENST00000623007 STX4Q12846 297 aa15.29■□□□□ 0.04
LDB3-208ENST00000623007 LAPTM4AQ15012 233 aa15.29■□□□□ 0.04
LDB3-208ENST00000623007 LTB4RQ15722 352 aa15.29■□□□□ 0.04
LDB3-208ENST00000623007 FGD3Q5JSP0 725 aa15.29■□□□□ 0.04
LDB3-208ENST00000623007 WDR74Q6RFH5 385 aaPredicted RBP15.29■□□□□ 0.04
LDB3-208ENST00000623007 ISLR2Q6UXK2 745 aa15.29■□□□□ 0.04
LDB3-208ENST00000623007 Q7L0L9 218 aa15.29■□□□□ 0.04
LDB3-208ENST00000623007 RABEPKQ7Z6M1 372 aa15.29■□□□□ 0.04
LDB3-208ENST00000623007 VWA5B2Q8N398 1253 aa15.29■□□□□ 0.04
LDB3-208ENST00000623007 TRUB1Q8WWH5 349 aaKnown RBP15.29■□□□□ 0.04
LDB3-208ENST00000623007 SLC9A6Q92581 669 aa15.29■□□□□ 0.04
LDB3-208ENST00000623007 SLC38A4Q969I6 547 aa15.29■□□□□ 0.04
LDB3-208ENST00000623007 SLC35A4Q96G79 324 aa15.29■□□□□ 0.04
LDB3-208ENST00000623007 SAP130Q9H0E3 1048 aa15.29■□□□□ 0.04
LDB3-208ENST00000623007 IRAK4Q9NWZ3 460 aa15.29■□□□□ 0.04
LDB3-208ENST00000623007 IMPAD1Q9NX62 359 aa15.29■□□□□ 0.04
LDB3-208ENST00000623007 MAT2BQ9NZL9 334 aa15.29■□□□□ 0.04
LDB3-208ENST00000623007 MRPS2Q9Y399 296 aaKnown RBP15.29■□□□□ 0.04
LDB3-208ENST00000623007 ZNF860A6NHJ4 632 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 VGLL3A8MV65 326 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 J3KTA2 159 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 AP3D1O14617 1153 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 RDH16O75452 317 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 OSMP13725 252 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 YAP1P46937 504 aaKnown RBP15.28■□□□□ 0.04
LDB3-208ENST00000623007 OLR1P78380 273 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 ILKQ13418 452 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 GANABQ14697 944 aaKnown RBP15.28■□□□□ 0.04
LDB3-208ENST00000623007 TRAM2Q15035 370 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 CTU2Q2VPK5 515 aaKnown RBP15.28■□□□□ 0.04
LDB3-208ENST00000623007 ZNF770Q6IQ21 691 aaPredicted RBP15.28■□□□□ 0.04
LDB3-208ENST00000623007 FAM111BQ6SJ93 734 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 GALNT12Q8IXK2 581 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 ZNF619Q8N2I2 560 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 SLC16A11Q8NCK7 471 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 OR9A4Q8NGU2 314 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 OR52P1PQ8NH57 321 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 ZFAND2BQ8WV99 257 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 FCGR1BQ92637 280 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 SLC35B4Q969S0 331 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 ANKRD9Q96BM1 317 aaPredicted RBP15.28■□□□□ 0.04
LDB3-208ENST00000623007 Q96MT0 163 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 TGM7Q96PF1 710 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 ELF4Q99607 663 aaPredicted RBP15.28■□□□□ 0.04
LDB3-208ENST00000623007 BCL7BQ9BQE9 202 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 UCK2Q9BZX2 261 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 ZNF350Q9GZX5 532 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 DUSP21Q9H596 190 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 NLGN3Q9NZ94 848 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 GMEB2Q9UKD1 530 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 A4GNTQ9UNA3 340 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 MMACHCQ9Y4U1 282 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 PCDHGA6Q9Y5G7 932 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 CACNA1IQ9P0X4 2223 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 MN1Q10571 1320 aaPredicted RBP15.28■□□□□ 0.04
LDB3-208ENST00000623007 SH3PXD2BA1X283 911 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 FFAR1O14842 300 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 PCDH17O14917 1159 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 OR10H3O60404 316 aa15.28■□□□□ 0.04
LDB3-208ENST00000623007 CYP4B1P13584 511 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms