RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	CHD7	Q9P2D1	2997 aa		13.65	□□□□□ -0.22
SMTN-223	ENST00000619644	HIDE1	A8MVS5	230 aa		13.65	□□□□□ -0.22
SMTN-223	ENST00000619644	B4GALT2	O60909	372 aa		13.65	□□□□□ -0.22
SMTN-223	ENST00000619644	IL1A	P01583	271 aa		13.65	□□□□□ -0.22
SMTN-223	ENST00000619644	PCCB	P05166	539 aa		13.65	□□□□□ -0.22
SMTN-223	ENST00000619644	SLC2A2	P11168	524 aa	Predicted RBP	13.65	□□□□□ -0.22
SMTN-223	ENST00000619644	MMP11	P24347	488 aa		13.65	□□□□□ -0.22
SMTN-223	ENST00000619644	NCBP2	P52298	156 aa	Known RBP eCLIP	13.65	□□□□□ -0.22
SMTN-223	ENST00000619644	RRAS2	P62070	204 aa	Predicted RBP	13.65	□□□□□ -0.22
SMTN-223	ENST00000619644	RPS25	P62851	125 aa	Known RBP	13.65	□□□□□ -0.22
SMTN-223	ENST00000619644	NOG	Q13253	232 aa		13.65	□□□□□ -0.22
SMTN-223	ENST00000619644	WSCD2	Q2TBF2	565 aa		13.65	□□□□□ -0.22
SMTN-223	ENST00000619644	CNKSR3	Q6P9H4	555 aa		13.65	□□□□□ -0.22
SMTN-223	ENST00000619644	NEURL3	Q96EH8	262 aa		13.65	□□□□□ -0.22
SMTN-223	ENST00000619644	GALNT9	Q9HCQ5	603 aa		13.65	□□□□□ -0.22
SMTN-223	ENST00000619644	HCN2	Q9UL51	889 aa		13.65	□□□□□ -0.22
SMTN-223	ENST00000619644	ZNF106	Q9H2Y7	1883 aa	Known RBP	13.65	□□□□□ -0.22
SMTN-223	ENST00000619644	FAM240B	A0A1B0GVZ2	78 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	PROM1	O43490	865 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	TMPRSS11D	O60235	418 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	NCR1	O76036	304 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	CXCL10	P02778	98 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	RHO	P08100	348 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	PTGS2	P35354	604 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	WDR5	P61964	334 aa	Known RBP	13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	MRPL28	Q13084	256 aa	Known RBP	13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	ZBTB37	Q5TC79	503 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	UNC5D	Q6UXZ4	953 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	COMTD1	Q86VU5	262 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	NANOGP1	Q8N7R0	232 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	OR52I1	Q8NGK6	324 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	OR6T1	Q8NGN1	323 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	KLK6	Q92876	244 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	ZDHHC5	Q9C0B5	715 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	OR5K3	A6NET4	321 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	LGI1	O95970	557 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	PDGFA	P04085	211 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	CSF2RA	P15509	400 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	DDX5	P17844	614 aa	Known RBP	13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	ELOA	Q14241	798 aa	Known RBP	13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	KRT33B	Q14525	404 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	KIAA1161	Q6NSJ0	714 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	ZER1	Q7Z7L7	766 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644		Q8N402	240 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	C9orf62	Q8N4C0	152 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	CLDN22	Q8N7P3	220 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	PLA2G15	Q8NCC3	412 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	KIAA1143	Q96AT1	154 aa	Predicted RBP	13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	MTERF3	Q96E29	417 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	QRFPR	Q96P65	431 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	TRAF4	Q9BUZ4	470 aa	Predicted RBP	13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	P2RX2	Q9UBL9	471 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	SLC9A8	Q9Y2E8	581 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	ANTXRL	A6NF34	631 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	CPSF4L	A6NMK7	179 aa	Known RBP	13.64	□□□□□ -0.23
SMTN-223	ENST00000619644		A8MVJ9	347 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	OR7A10	O76100	309 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	RAB36	O95755	333 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	ARSB	P15848	533 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	MAPK9	P45984	424 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	GIPR	P48546	466 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	TAS2R41	P59536	307 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	SYT14P1	Q58G82	188 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	MZT2B	Q6NZ67	158 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	B3GLCT	Q6Y288	498 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	HSDL2	Q6YN16	418 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	AMZ2	Q86W34	360 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	RASGRP3	Q8IV61	690 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	CCDC116	Q8IYX3	515 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	ESX1	Q8N693	406 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	C7orf57	Q8NEG2	295 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	MARVELD3	Q96A59	401 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	RNFT2	Q96EX2	444 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	ZC3HAV1L	Q96H79	300 aa	Known RBP	13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	KCTD7	Q96MP8	289 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	SLC23A2	Q9UGH3	650 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	FBXW2	Q9UKT8	454 aa		13.64	□□□□□ -0.23
SMTN-223	ENST00000619644	HCN1	O60741	890 aa		13.63	□□□□□ -0.23
SMTN-223	ENST00000619644	AVPR1B	P47901	424 aa		13.63	□□□□□ -0.23
SMTN-223	ENST00000619644	KCNJ5	P48544	419 aa		13.63	□□□□□ -0.23
SMTN-223	ENST00000619644	RNF144A	P50876	292 aa	Predicted RBP	13.63	□□□□□ -0.23
SMTN-223	ENST00000619644	CLDN20	P56880	219 aa		13.63	□□□□□ -0.23
SMTN-223	ENST00000619644	TAGLN	Q01995	201 aa	Known RBP	13.63	□□□□□ -0.23
SMTN-223	ENST00000619644	MLLT11	Q13015	90 aa	Predicted RBP	13.63	□□□□□ -0.23
SMTN-223	ENST00000619644	IL18	Q14116	193 aa		13.63	□□□□□ -0.23
SMTN-223	ENST00000619644	CCNJ	Q5T5M9	372 aa		13.63	□□□□□ -0.23
SMTN-223	ENST00000619644	GRASP	Q7Z6J2	395 aa	Predicted RBP	13.63	□□□□□ -0.23
SMTN-223	ENST00000619644	SLAIN1	Q8ND83	568 aa		13.63	□□□□□ -0.23
SMTN-223	ENST00000619644	DUSP18	Q8NEJ0	188 aa		13.63	□□□□□ -0.23
SMTN-223	ENST00000619644	PROKR2	Q8NFJ6	384 aa		13.63	□□□□□ -0.23
SMTN-223	ENST00000619644	DCLRE1C	Q96SD1	692 aa	Known RBP	13.63	□□□□□ -0.23
SMTN-223	ENST00000619644	GPA33	Q99795	319 aa		13.63	□□□□□ -0.23
SMTN-223	ENST00000619644	PLA2G12A	Q9BZM1	189 aa		13.63	□□□□□ -0.23
SMTN-223	ENST00000619644	NEUROD4	Q9HD90	331 aa		13.63	□□□□□ -0.23
SMTN-223	ENST00000619644	PAK6	Q9NQU5	681 aa	Predicted RBP	13.63	□□□□□ -0.23
SMTN-223	ENST00000619644	LYRM1	O43325	122 aa		13.63	□□□□□ -0.23
SMTN-223	ENST00000619644	RB1	P06400	928 aa		13.63	□□□□□ -0.23
SMTN-223	ENST00000619644	FAM157B	P0CG42	384 aa		13.63	□□□□□ -0.23
SMTN-223	ENST00000619644	PRKAR1A	P10644	381 aa		13.63	□□□□□ -0.23
SMTN-223	ENST00000619644	KEL	P23276	732 aa		13.63	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms