RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 PLCXD1Q9NUJ7 323 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 SMPD3Q9NY59 655 aaPredicted RBP12.06□□□□□ -0.48
TCF4-248ENST00000616053 SLC23A2Q9UGH3 650 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 GCC2Q8IWJ2 1684 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 CAPN5O15484 640 aaPredicted RBP12.06□□□□□ -0.48
TCF4-248ENST00000616053 HTRA2O43464 458 aaPredicted RBP12.06□□□□□ -0.48
TCF4-248ENST00000616053 TLX2O43763 284 aaPredicted RBP12.06□□□□□ -0.48
TCF4-248ENST00000616053 OLFM2O95897 454 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 IL3P08700 152 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 MAKP20794 623 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 HRH2P25021 359 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 LCN1P31025 176 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 PCBD1P61457 104 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 FKBP1AP62942 108 aaKnown RBP12.06□□□□□ -0.48
TCF4-248ENST00000616053 ZBED5Q49AG3 693 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 GRPEL2Q8TAA5 225 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 FCGR1BQ92637 280 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 C12orf43Q96C57 262 aaKnown RBP12.06□□□□□ -0.48
TCF4-248ENST00000616053 LRR1Q96L50 414 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 MECRQ9BV79 373 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 TPT1P8Q9HAU6 139 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 PTGR1Q14914 329 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 CNN3Q15417 329 aaKnown RBP12.06□□□□□ -0.48
TCF4-248ENST00000616053 GGNBP1Q5YKI7 109 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 FRMPD2BQ6IN97 320 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 PPP1R3BQ86XI6 285 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 WDR20Q8TBZ3 569 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 ZFYVE21Q9BQ24 234 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 MVB12BQ9H7P6 319 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 CLIC1O00299 241 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 OR2T1O43869 369 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 CLDN7O95471 211 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 C2P06681 752 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 NFYBP25208 207 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 L1CAMP32004 1257 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 NKX3-2P78367 333 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 NTRK3Q16288 839 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 C22orf39Q6P5X5 142 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 TEX10Q9NXF1 929 aaPredicted RBP12.06□□□□□ -0.48
TCF4-248ENST00000616053 TCFL5Q9UL49 500 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 TLR6Q9Y2C9 796 aa12.06□□□□□ -0.48
TCF4-248ENST00000616053 RAB5BP61020 215 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 TAF9Q16594 264 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 TRIM74Q86UV6 250 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 ARHGEF12Q9NZN5 1544 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 HLA-DPB1P04440 258 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 C4orf17Q53FE4 359 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 FBXW12Q6X9E4 464 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 SPARTQ8N0X7 666 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 FADS6Q8N9I5 356 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 DNAJB8Q8NHS0 232 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 WACQ9BTA9 647 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 WDR18Q9BV38 432 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 LSM5Q9Y4Y9 91 aaKnown RBP12.05□□□□□ -0.48
TCF4-248ENST00000616053 ABCA8O94911 1581 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 FGF4P08620 206 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 PPP5CP53041 499 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 PLAURQ03405 335 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 SLAMF1Q13291 335 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 LRRC38Q5VT99 294 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 GIMAP1Q8WWP7 306 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 INTS12Q96CB8 462 aaKnown RBP12.05□□□□□ -0.48
TCF4-248ENST00000616053 RHBDF1Q96CC6 855 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 CDK15Q96Q40 435 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 WDR55Q9H6Y2 383 aaPredicted RBP12.05□□□□□ -0.48
TCF4-248ENST00000616053 SLC17A6Q9P2U8 582 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 ACOX3O15254 700 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 DRD1P21728 446 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 CDK6Q00534 326 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 ANKDD1AQ495B1 522 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 TRIM61Q5EBN2 209 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 FAM122CQ6P4D5 195 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 GID4Q8IVV7 300 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 SUN5Q8TC36 379 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 DDX1Q92499 740 aaKnown RBP12.05□□□□□ -0.48
TCF4-248ENST00000616053 SGK3Q96BR1 496 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 MKLN1Q9UL63 735 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 TTC24A2A3L6 582 aaPredicted RBP12.05□□□□□ -0.48
TCF4-248ENST00000616053 TBX18O95935 607 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 VASPP50552 380 aaPredicted RBP12.05□□□□□ -0.48
TCF4-248ENST00000616053 NUP43Q8NFH3 380 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 PIGCQ92535 297 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 MFRPQ9BY79 579 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 RNF212BA8MTL3 300 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 KIAA0355O15063 1070 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 SC5DO75845 299 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 SLC35A2P78381 396 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 DESI1Q6ICB0 168 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 SLC22A25Q6T423 547 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 MAL2Q969L2 176 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 PCDHAC1Q9H158 963 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 LRRC4CQ9HCJ2 640 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 ADAM17P78536 824 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 GBE1Q04446 702 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 TEPSINQ96N21 525 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 WWTR1Q9GZV5 400 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 RNF38Q9H0F5 515 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 KCNIP2Q9NS61 270 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 ZFP57Q9NU63 452 aa12.05□□□□□ -0.48
TCF4-248ENST00000616053 CNTRLQ7Z7A1 2325 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms