RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 PDZK1IP1Q13113 114 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 RDH10Q8IZV5 341 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 OR10Z1Q8NGY1 313 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 TAAR1Q96RJ0 339 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 EQTNQ9NQ60 294 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 TSPAN11A1L157 253 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 ZNF623O75123 536 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 JUNP05412 331 aaKnown RBP8.37□□□□□ -1.07
TTC28-208ENST00000612946 NDUFS1P28331 727 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 GRM5P41594 1212 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 ARNTL2Q8WYA1 636 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 RBM18Q96H35 190 aaKnown RBP8.37□□□□□ -1.07
TTC28-208ENST00000612946 RNF170Q96K19 258 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 PKMYT1Q99640 499 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 PDCD2LQ9BRP1 358 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 DMAC2Q9NW81 257 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 COPS3Q9UNS2 423 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 YDJCA8MPS7 323 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 UGDHO60701 494 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 STSP08842 583 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 GABRA2P47869 451 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 IL13RA1P78552 427 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 BCL7AQ4VC05 210 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 HENMT1Q5T8I9 393 aaKnown RBP8.37□□□□□ -1.07
TTC28-208ENST00000612946 GPR139Q6DWJ6 353 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 TMEM151AQ8N4L1 468 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 FRZBQ92765 325 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 BCO1Q9HAY6 547 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 BEX1Q9HBH7 125 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 UBE2Q2LH0YL09 131 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 LILRB5O75023 590 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 RHOP08100 348 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 CLLU1Q5K131 121 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 TMEM150AQ86TG1 271 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 ADGRG5Q8IZF4 528 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 THAP4Q8WY91 577 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 ORAI3Q9BRQ5 295 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 MOB1AQ9H8S9 216 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 TAS2R16Q9NYV7 291 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 PCTPQ9UKL6 214 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 KIDINS220Q9ULH0 1771 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 FOXO6A8MYZ6 492 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 SLC16A6O15403 523 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 HRH2P25021 359 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 GDF10P55107 478 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 LCN6P62502 163 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 ZNF792Q3KQV3 632 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 MSS51Q4VC12 460 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 FBXO22Q8NEZ5 403 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 ST7LQ8TDW4 575 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 HOXB13Q92826 284 aaPredicted RBP8.37□□□□□ -1.07
TTC28-208ENST00000612946 FAM46AQ96IP4 442 aaKnown RBP8.37□□□□□ -1.07
TTC28-208ENST00000612946 ACTL8Q9H568 366 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 ISYNA1Q9NPH2 558 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 COQ3Q9NZJ6 369 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 GRHPRQ9UBQ7 328 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 PCDHB9Q9Y5E1 797 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 TRAV20A0A0B4J274 112 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 HHLA1C9JL84 531 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 NTSR2O95665 410 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 MMP7P09237 267 aaPredicted RBP8.37□□□□□ -1.07
TTC28-208ENST00000612946 T-ENOLP0DO92 83 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 NDUFV2P19404 249 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 FCGRTP55899 365 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 SLC25A11Q02978 314 aaKnown RBP8.37□□□□□ -1.07
TTC28-208ENST00000612946 GPR68Q15743 365 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.37□□□□□ -1.07
TTC28-208ENST00000612946 SLC51AQ86UW1 340 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 OR4C5Q8NGB2 326 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 ADAM19Q9H013 955 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 ZNF286AQ9HBT8 521 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 SH3BGRLO75368 114 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 C1RP00736 705 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 TFAP2AP05549 437 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 MFGE8Q08431 387 aaPredicted RBP8.37□□□□□ -1.07
TTC28-208ENST00000612946 FUT2Q10981 343 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 NFIXQ14938 502 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 OR52H1Q8NGJ2 320 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 RAET1EQ8TD07 263 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 C2orf15Q8WU43 125 aaKnown RBP8.37□□□□□ -1.07
TTC28-208ENST00000612946 RTP4Q96DX8 246 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 G6PC3Q9BUM1 346 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 ZCCHC3Q9NUD5 404 aaKnown RBP8.37□□□□□ -1.07
TTC28-208ENST00000612946 NPIPA5E9PKD4 350 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 SLC39A12Q504Y0 691 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 ADGRF3Q8IZF5 1079 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 OR4M1Q8NGD0 313 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 OR1E3Q8WZA6 343 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 ALG8Q9BVK2 526 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 TMPRSS4Q9NRS4 437 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 NPIPA1Q9UND3 350 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 LRP5LA4QPB2 252 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 RAD1O60671 282 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 OR2C1O95371 312 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 ALPLP05186 524 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 HOXA9P31269 272 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 TNFSF8P32971 234 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 REEP5Q00765 189 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 PPP1R26Q5T8A7 1209 aaPredicted RBP8.37□□□□□ -1.07
TTC28-208ENST00000612946 C9orf57Q5W0N0 161 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms