RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 TAF3Q5VWG9 929 aa3.38□□□□□ -1.87
SMCHD1-213ENST00000609587 KDELC1Q6UW63 502 aa3.38□□□□□ -1.87
SMCHD1-213ENST00000609587 FAM159AQ6UWV7 190 aa3.38□□□□□ -1.87
SMCHD1-213ENST00000609587 TMEM26Q6ZUK4 368 aa3.38□□□□□ -1.87
SMCHD1-213ENST00000609587 PPP1R42Q7Z4L9 355 aa3.38□□□□□ -1.87
SMCHD1-213ENST00000609587 RANBP3LQ86VV4 465 aaPredicted RBP3.38□□□□□ -1.87
SMCHD1-213ENST00000609587 AMZ2Q86W34 360 aa3.38□□□□□ -1.87
SMCHD1-213ENST00000609587 FGFRL1Q8N441 504 aa3.38□□□□□ -1.87
SMCHD1-213ENST00000609587 FLVCR1-AS1Q8TAF5 88 aa3.38□□□□□ -1.87
SMCHD1-213ENST00000609587 FBXO30Q8TB52 745 aa3.38□□□□□ -1.87
SMCHD1-213ENST00000609587 ITLN1Q8WWA0 313 aa3.38□□□□□ -1.87
SMCHD1-213ENST00000609587 NTNG2Q96CW9 530 aa3.38□□□□□ -1.87
SMCHD1-213ENST00000609587 FAM111AQ96PZ2 611 aa3.38□□□□□ -1.87
SMCHD1-213ENST00000609587 NDUFAF3Q9BU61 184 aa3.38□□□□□ -1.87
SMCHD1-213ENST00000609587 TMEM231Q9H6L2 316 aa3.38□□□□□ -1.87
SMCHD1-213ENST00000609587 LIN28AQ9H9Z2 209 aaKnown RBP3.38□□□□□ -1.87
SMCHD1-213ENST00000609587 ADGRL4Q9HBW9 690 aa3.38□□□□□ -1.87
SMCHD1-213ENST00000609587 ZNF446Q9NWS9 450 aa3.38□□□□□ -1.87
SMCHD1-213ENST00000609587 ZMAT5Q9UDW3 170 aaKnown RBP3.38□□□□□ -1.87
SMCHD1-213ENST00000609587 BCAP29Q9UHQ4 241 aa3.38□□□□□ -1.87
SMCHD1-213ENST00000609587 SYNJ2O15056 1496 aa3.38□□□□□ -1.87
SMCHD1-213ENST00000609587 COL5A2P05997 1499 aaPredicted RBP3.38□□□□□ -1.87
SMCHD1-213ENST00000609587 A0A0J9YVX5 310 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 SRRM5B3KS81 715 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 RASGRF2O14827 1237 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 CASQ2O14958 399 aaPredicted RBP3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 PHF1O43189 567 aaPredicted RBP3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 LRRTM2O43300 516 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 PRPSAP2O60256 369 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 PDE5AO76074 875 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 NUDT14O95848 222 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 GOT2P00505 430 aaKnown RBP3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 IGHG3P01860 377 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 ZCCHC18P0CG32 403 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 KRT13P13646 458 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 GP9P14770 177 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 AZU1P20160 251 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 PAX7P23759 505 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 SAA4P35542 130 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 PRPHP41219 470 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 ELK3P41970 407 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 BRCC3P46736 316 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 GPC3P51654 580 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 MFAP2P55001 183 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 RAG2P55895 527 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 SLC26A5P58743 744 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 DMTNQ08495 405 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 SNX1Q13596 522 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 CRMP1Q14194 572 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 ABRAXAS2Q15018 415 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 KARSQ15046 597 aaKnown RBP3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 SLC1A5Q15758 541 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 C17orf58Q2M2W7 97 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 CNPY1Q3B7I2 92 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 C14orf28Q4W4Y0 310 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 ACER2Q5QJU3 275 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 LINC00242Q5T6M2 205 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 FAM219BQ5XKK7 198 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 ATRAIDQ6UW56 229 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 RBM43Q6ZSC3 357 aaKnown RBP3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 RUFY3Q7L099 469 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 GOLGA7Q7Z5G4 137 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 GPBP1Q86WP2 473 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 ARL14Q8N4G2 192 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 ZNF397Q8NF99 534 aaPredicted RBP3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 FCGR1BQ92637 280 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 SYAP1Q96A49 352 aaPredicted RBP3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 ANKRD9Q96BM1 317 aaPredicted RBP3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 RAB3CQ96E17 227 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 CNDP1Q96KN2 507 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 SAMD8Q96LT4 415 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 PYGO2Q9BRQ0 406 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 TTYH2Q9BSA4 534 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 CRACR2AQ9BSW2 395 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 RPP25Q9BUL9 199 aaKnown RBP3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 APOOQ9BUR5 198 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 TEX13BQ9BXU2 312 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 HSD3B7Q9H2F3 369 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 ALG9Q9H6U8 611 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 STARD5Q9NSY2 213 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 CNOT2Q9NZN8 540 aaKnown RBP3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 RCOR3Q9P2K3 495 aaPredicted RBP3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 MLXQ9UH92 298 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 IL20RAQ9UHF4 553 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 SH3BGRL2Q9UJC5 107 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 RNF24Q9Y225 148 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 PLEKHA6Q9Y2H5 1048 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 FKBP7Q9Y680 259 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 UBE4BO95155 1302 aa3.37□□□□□ -1.87
SMCHD1-213ENST00000609587 TDRD15B5MCY1 1934 aaKnown RBP3.36□□□□□ -1.87
SMCHD1-213ENST00000609587 ZNF487B1APH4 448 aa3.36□□□□□ -1.87
SMCHD1-213ENST00000609587 E9PAM4 449 aa3.36□□□□□ -1.87
SMCHD1-213ENST00000609587 MPHOSPH10O00566 681 aaKnown RBP3.36□□□□□ -1.87
SMCHD1-213ENST00000609587 ADAM12O43184 909 aa3.36□□□□□ -1.87
SMCHD1-213ENST00000609587 RANBP6O60518 1105 aaKnown RBP3.36□□□□□ -1.87
SMCHD1-213ENST00000609587 NEMFO60524 1076 aa3.36□□□□□ -1.87
SMCHD1-213ENST00000609587 STAM2O75886 525 aa3.36□□□□□ -1.87
SMCHD1-213ENST00000609587 STK17BO94768 372 aa3.36□□□□□ -1.87
SMCHD1-213ENST00000609587 SNX4O95219 450 aa3.36□□□□□ -1.87
SMCHD1-213ENST00000609587 ECDO95905 644 aaPredicted RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms