RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 RNF138Q8WVD3 245 aa9.03□□□□□ -0.96
LIG1-209ENST00000596104 STARD4Q96DR4 205 aa9.03□□□□□ -0.96
LIG1-209ENST00000596104 HS3ST6Q96QI5 342 aa9.03□□□□□ -0.96
LIG1-209ENST00000596104 MRPL1Q9BYD6 325 aaKnown RBP9.03□□□□□ -0.96
LIG1-209ENST00000596104 IPPKQ9H8X2 491 aa9.03□□□□□ -0.96
LIG1-209ENST00000596104 KLHL28Q9NXS3 571 aa9.03□□□□□ -0.96
LIG1-209ENST00000596104 TAS2R10Q9NYW0 307 aa9.03□□□□□ -0.96
LIG1-209ENST00000596104 GRHL1Q9NZI5 618 aa9.03□□□□□ -0.96
LIG1-209ENST00000596104 EHD3Q9NZN3 535 aa9.03□□□□□ -0.96
LIG1-209ENST00000596104 KLRF1Q9NZS2 232 aa9.03□□□□□ -0.96
LIG1-209ENST00000596104 FBXL2Q9UKC9 423 aa9.03□□□□□ -0.96
LIG1-209ENST00000596104 ADAM29Q9UKF5 820 aa9.03□□□□□ -0.96
LIG1-209ENST00000596104 ADAM21Q9UKJ8 722 aa9.03□□□□□ -0.96
LIG1-209ENST00000596104 CFL2Q9Y281 166 aa9.03□□□□□ -0.96
LIG1-209ENST00000596104 DLGAP4Q9Y2H0 992 aa9.03□□□□□ -0.96
LIG1-209ENST00000596104 ACOT9Q9Y305 439 aa9.03□□□□□ -0.96
LIG1-209ENST00000596104 PLLPQ9Y342 182 aa9.03□□□□□ -0.96
LIG1-209ENST00000596104 PCDHA9Q9Y5H5 950 aa9.03□□□□□ -0.96
LIG1-209ENST00000596104 WIF1Q9Y5W5 379 aa9.03□□□□□ -0.96
LIG1-209ENST00000596104 DOCK7Q96N67 2140 aa9.02□□□□□ -0.96
LIG1-209ENST00000596104 HMX2A2RU54 273 aa9.02□□□□□ -0.97
LIG1-209ENST00000596104 OR6C70A6NIJ9 312 aa9.02□□□□□ -0.97
LIG1-209ENST00000596104 INAFM1C9JVW0 142 aa9.02□□□□□ -0.97
LIG1-209ENST00000596104 OR7A17O14581 309 aa9.02□□□□□ -0.97
LIG1-209ENST00000596104 SMAD7O15105 426 aaKnown RBP9.02□□□□□ -0.97
LIG1-209ENST00000596104 ZIC3O60481 467 aa9.02□□□□□ -0.97
LIG1-209ENST00000596104 CLDN9O95484 217 aa9.02□□□□□ -0.97
LIG1-209ENST00000596104 C2P06681 752 aa9.02□□□□□ -0.97
LIG1-209ENST00000596104 CRHP06850 196 aa9.02□□□□□ -0.97
LIG1-209ENST00000596104 FPR1P21462 350 aa9.02□□□□□ -0.97
LIG1-209ENST00000596104 DRD5P21918 477 aa9.02□□□□□ -0.97
LIG1-209ENST00000596104 FEN1P39748 380 aaKnown RBP9.02□□□□□ -0.97
LIG1-209ENST00000596104 CD79BP40259 229 aa9.02□□□□□ -0.97
LIG1-209ENST00000596104 PPICP45877 212 aa9.02□□□□□ -0.97
LIG1-209ENST00000596104 EMDP50402 254 aa9.02□□□□□ -0.97
LIG1-209ENST00000596104 B3GALT5-AS1P59052 145 aa9.02□□□□□ -0.97
LIG1-209ENST00000596104 BCL2A1Q16548 175 aa9.02□□□□□ -0.97
LIG1-209ENST00000596104 TRMT12Q53H54 448 aaKnown RBP9.02□□□□□ -0.97
LIG1-209ENST00000596104 FRG2Q64ET8 278 aa9.02□□□□□ -0.97
LIG1-209ENST00000596104 METTL2BQ6P1Q9 378 aaKnown RBP9.02□□□□□ -0.97
LIG1-209ENST00000596104 VWA1Q6PCB0 445 aa9.02□□□□□ -0.97
LIG1-209ENST00000596104 AAGABQ6PD74 315 aa9.02□□□□□ -0.97
LIG1-209ENST00000596104 CXXC5Q7LFL8 322 aaKnown RBP9.02□□□□□ -0.97
LIG1-209ENST00000596104 BTLAQ7Z6A9 289 aa9.02□□□□□ -0.97
LIG1-209ENST00000596104 METTL4Q8N3J2 472 aa9.02□□□□□ -0.97
LIG1-209ENST00000596104 OR52B6Q8NGF0 335 aa9.02□□□□□ -0.97
LIG1-209ENST00000596104 OR52R1Q8NGF1 315 aa9.02□□□□□ -0.97
LIG1-209ENST00000596104 SPATA3Q8NHX4 192 aa9.02□□□□□ -0.97
LIG1-209ENST00000596104 IGFBPL1Q8WX77 278 aa9.02□□□□□ -0.97
LIG1-209ENST00000596104 PIK3IP1Q96FE7 263 aa9.02□□□□□ -0.97
LIG1-209ENST00000596104 PERPQ96FX8 193 aa9.02□□□□□ -0.97
LIG1-209ENST00000596104 SLC35A4Q96G79 324 aa9.02□□□□□ -0.97
LIG1-209ENST00000596104 SFXN2Q96NB2 322 aa9.02□□□□□ -0.97
LIG1-209ENST00000596104 GPR78Q96P69 363 aa9.02□□□□□ -0.97
LIG1-209ENST00000596104 CDK15Q96Q40 435 aa9.02□□□□□ -0.97
LIG1-209ENST00000596104 FRG2BQ96QU4 278 aa9.02□□□□□ -0.97
LIG1-209ENST00000596104 CCL19Q99731 98 aa9.02□□□□□ -0.97
LIG1-209ENST00000596104 PIGQQ9BRB3 760 aa9.02□□□□□ -0.97
LIG1-209ENST00000596104 ERP44Q9BS26 406 aa9.02□□□□□ -0.97
LIG1-209ENST00000596104 LRRC1Q9BTT6 524 aa9.02□□□□□ -0.97
LIG1-209ENST00000596104 GSX2Q9BZM3 304 aa9.02□□□□□ -0.97
LIG1-209ENST00000596104 BRINP2Q9C0B6 783 aa9.02□□□□□ -0.97
LIG1-209ENST00000596104 DPH5Q9H2P9 285 aa9.02□□□□□ -0.97
LIG1-209ENST00000596104 UBTD1Q9HAC8 227 aa9.02□□□□□ -0.97
LIG1-209ENST00000596104 WHRNQ9P202 907 aa9.02□□□□□ -0.97
LIG1-209ENST00000596104 HEY2Q9UBP5 337 aa9.02□□□□□ -0.97
LIG1-209ENST00000596104 BCAP29Q9UHQ4 241 aa9.02□□□□□ -0.97
LIG1-209ENST00000596104 MRPS18CQ9Y3D5 142 aaKnown RBP9.02□□□□□ -0.97
LIG1-209ENST00000596104 TNPO3Q9Y5L0 923 aaKnown RBP9.02□□□□□ -0.97
LIG1-209ENST00000596104 ATRQ13535 2644 aa9.02□□□□□ -0.97
LIG1-209ENST00000596104 FREM3P0C091 2139 aa9.02□□□□□ -0.97
LIG1-209ENST00000596104 STAB1Q9NY15 2570 aa9.02□□□□□ -0.97
LIG1-209ENST00000596104 COL6A5A8TX70 2615 aa9.01□□□□□ -0.97
LIG1-209ENST00000596104 ZANQ9Y493 2812 aa9.01□□□□□ -0.97
LIG1-209ENST00000596104 ARID1AO14497 2285 aa9.01□□□□□ -0.97
LIG1-209ENST00000596104 A0A087X1B8 175 aa9.01□□□□□ -0.97
LIG1-209ENST00000596104 C1orf226A1L170 272 aa9.01□□□□□ -0.97
LIG1-209ENST00000596104 FRG2CA6NGY1 282 aa9.01□□□□□ -0.97
LIG1-209ENST00000596104 GOLGA6L10A6NI86 522 aa9.01□□□□□ -0.97
LIG1-209ENST00000596104 ZSCAN12O43309 604 aa9.01□□□□□ -0.97
LIG1-209ENST00000596104 SMNDC1O75940 238 aaKnown RBP eCLIP9.01□□□□□ -0.97
LIG1-209ENST00000596104 CGAP01215 116 aa9.01□□□□□ -0.97
LIG1-209ENST00000596104 PCSK2P16519 638 aa9.01□□□□□ -0.97
LIG1-209ENST00000596104 CSNK2A2P19784 350 aaPredicted RBP9.01□□□□□ -0.97
LIG1-209ENST00000596104 UGT2B10P36537 528 aa9.01□□□□□ -0.97
LIG1-209ENST00000596104 KIR2DL2P43627 348 aaPredicted RBP9.01□□□□□ -0.97
LIG1-209ENST00000596104 MAPK12P53778 367 aa9.01□□□□□ -0.97
LIG1-209ENST00000596104 GAS1P54826 345 aa9.01□□□□□ -0.97
LIG1-209ENST00000596104 CLDN15P56746 228 aa9.01□□□□□ -0.97
LIG1-209ENST00000596104 TRAF3Q13114 568 aa9.01□□□□□ -0.97
LIG1-209ENST00000596104 NAB1Q13506 487 aa9.01□□□□□ -0.97
LIG1-209ENST00000596104 ACAP2Q15057 778 aa9.01□□□□□ -0.97
LIG1-209ENST00000596104 LTB4RQ15722 352 aa9.01□□□□□ -0.97
LIG1-209ENST00000596104 FAM83EQ2M2I3 478 aa9.01□□□□□ -0.97
LIG1-209ENST00000596104 CCNYL2Q5T2Q4 361 aa9.01□□□□□ -0.97
LIG1-209ENST00000596104 C20orf204Q6ZNR8 217 aa9.01□□□□□ -0.97
LIG1-209ENST00000596104 C22orf34Q6ZV56 151 aa9.01□□□□□ -0.97
LIG1-209ENST00000596104 COMMD6Q7Z4G1 85 aa9.01□□□□□ -0.97
LIG1-209ENST00000596104 CCDC91Q7Z6B0 441 aa9.01□□□□□ -0.97
LIG1-209ENST00000596104 ADCY4Q8NFM4 1077 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms