RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 KCNF1Q9H3M0 494 aa10.76□□□□□ -0.69
BRCA1-225ENST00000586385 ZBTB26Q9HCK0 441 aa10.76□□□□□ -0.69
BRCA1-225ENST00000586385 TAS2R10Q9NYW0 307 aa10.76□□□□□ -0.69
BRCA1-225ENST00000586385 PCDHA9Q9Y5H5 950 aa10.76□□□□□ -0.69
BRCA1-225ENST00000586385 COL6A5A8TX70 2615 aa10.75□□□□□ -0.69
BRCA1-225ENST00000586385 MED12LQ86YW9 2145 aa10.75□□□□□ -0.69
BRCA1-225ENST00000586385 CCDC188H7C350 402 aa10.75□□□□□ -0.69
BRCA1-225ENST00000586385 MSTNO14793 375 aa10.75□□□□□ -0.69
BRCA1-225ENST00000586385 TO15178 435 aa10.75□□□□□ -0.69
BRCA1-225ENST00000586385 EIF3HO15372 352 aaKnown RBP eCLIP10.75□□□□□ -0.69
BRCA1-225ENST00000586385 CDH16O75309 829 aa10.75□□□□□ -0.69
BRCA1-225ENST00000586385 CBR3O75828 277 aa10.75□□□□□ -0.69
BRCA1-225ENST00000586385 CGAP01215 116 aa10.75□□□□□ -0.69
BRCA1-225ENST00000586385 C2P06681 752 aa10.75□□□□□ -0.69
BRCA1-225ENST00000586385 KRT15P19012 456 aa10.75□□□□□ -0.69
BRCA1-225ENST00000586385 CRYGSP22914 178 aa10.75□□□□□ -0.69
BRCA1-225ENST00000586385 SRD5A2P31213 254 aa10.75□□□□□ -0.69
BRCA1-225ENST00000586385 CPOXP36551 454 aa10.75□□□□□ -0.69
BRCA1-225ENST00000586385 FEN1P39748 380 aaKnown RBP10.75□□□□□ -0.69
BRCA1-225ENST00000586385 MC3RP41968 323 aa10.75□□□□□ -0.69
BRCA1-225ENST00000586385 KIR2DL2P43627 348 aaPredicted RBP10.75□□□□□ -0.69
BRCA1-225ENST00000586385 PCYT1AP49585 367 aa10.75□□□□□ -0.69
BRCA1-225ENST00000586385 GAS1P54826 345 aa10.75□□□□□ -0.69
BRCA1-225ENST00000586385 ALDH18A1P54886 795 aaKnown RBP10.75□□□□□ -0.69
BRCA1-225ENST00000586385 KRTAP1-1Q07627 177 aa10.75□□□□□ -0.69
BRCA1-225ENST00000586385 PLCXD2Q0VAA5 305 aa10.75□□□□□ -0.69
BRCA1-225ENST00000586385 TRAF3Q13114 568 aa10.75□□□□□ -0.69
BRCA1-225ENST00000586385 ACKR1Q16570 336 aa10.75□□□□□ -0.69
BRCA1-225ENST00000586385 SLC48A1Q6P1K1 146 aa10.75□□□□□ -0.69
BRCA1-225ENST00000586385 ENPP6Q6UWR7 440 aa10.75□□□□□ -0.69
BRCA1-225ENST00000586385 TBC1D1Q86TI0 1168 aaPredicted RBP10.75□□□□□ -0.69
BRCA1-225ENST00000586385 OR52R1Q8NGF1 315 aa10.75□□□□□ -0.69
BRCA1-225ENST00000586385 TMBIM1Q969X1 311 aa10.75□□□□□ -0.69
BRCA1-225ENST00000586385 REPS1Q96D71 796 aa10.75□□□□□ -0.69
BRCA1-225ENST00000586385 PERPQ96FX8 193 aa10.75□□□□□ -0.69
BRCA1-225ENST00000586385 ZNF681Q96N22 645 aa10.75□□□□□ -0.69
BRCA1-225ENST00000586385 NSUN5Q96P11 429 aaKnown RBP10.75□□□□□ -0.69
BRCA1-225ENST00000586385 SERPINI1Q99574 410 aa10.75□□□□□ -0.69
BRCA1-225ENST00000586385 OPN3Q9H1Y3 402 aaPredicted RBP10.75□□□□□ -0.69
BRCA1-225ENST00000586385 ANKRA2Q9H9E1 313 aa10.75□□□□□ -0.69
BRCA1-225ENST00000586385 KLRF1Q9NZS2 232 aa10.75□□□□□ -0.69
BRCA1-225ENST00000586385 NDRG3Q9UGV2 375 aa10.75□□□□□ -0.69
BRCA1-225ENST00000586385 TRPS1Q9UHF7 1281 aa10.75□□□□□ -0.69
BRCA1-225ENST00000586385 ADAM29Q9UKF5 820 aa10.75□□□□□ -0.69
BRCA1-225ENST00000586385 EIF3LQ9Y262 564 aaKnown RBP10.75□□□□□ -0.69
BRCA1-225ENST00000586385 ACOT9Q9Y305 439 aa10.75□□□□□ -0.69
BRCA1-225ENST00000586385 ANGPTL3Q9Y5C1 460 aa10.75□□□□□ -0.69
BRCA1-225ENST00000586385 ATRQ13535 2644 aa10.75□□□□□ -0.69
BRCA1-225ENST00000586385 H0YC42 278 aa10.74□□□□□ -0.69
BRCA1-225ENST00000586385 CASKO14936 926 aa10.74□□□□□ -0.69
BRCA1-225ENST00000586385 ACOX3O15254 700 aa10.74□□□□□ -0.69
BRCA1-225ENST00000586385 GFAPP14136 432 aa10.74□□□□□ -0.69
BRCA1-225ENST00000586385 PCSK2P16519 638 aa10.74□□□□□ -0.69
BRCA1-225ENST00000586385 DRD5P21918 477 aa10.74□□□□□ -0.69
BRCA1-225ENST00000586385 TCEA1P23193 301 aaKnown RBP10.74□□□□□ -0.69
BRCA1-225ENST00000586385 CHMP24386 653 aa10.74□□□□□ -0.69
BRCA1-225ENST00000586385 CD79BP40259 229 aa10.74□□□□□ -0.69
BRCA1-225ENST00000586385 PPICP45877 212 aa10.74□□□□□ -0.69
BRCA1-225ENST00000586385 TPD52P55327 224 aaPredicted RBP10.74□□□□□ -0.69
BRCA1-225ENST00000586385 PHEXP78562 749 aa10.74□□□□□ -0.69
BRCA1-225ENST00000586385 MRPS35P82673 323 aaKnown RBP10.74□□□□□ -0.69
BRCA1-225ENST00000586385 GALNT1Q10472 559 aaPredicted RBP10.74□□□□□ -0.69
BRCA1-225ENST00000586385 GAB1Q13480 694 aa10.74□□□□□ -0.69
BRCA1-225ENST00000586385 CAPRIN1Q14444 709 aaKnown RBP10.74□□□□□ -0.69
BRCA1-225ENST00000586385 TRADDQ15628 312 aa10.74□□□□□ -0.69
BRCA1-225ENST00000586385 UBAP2Q5T6F2 1119 aaKnown RBP10.74□□□□□ -0.69
BRCA1-225ENST00000586385 FRG2Q64ET8 278 aa10.74□□□□□ -0.69
BRCA1-225ENST00000586385 OR5M10Q6IEU7 315 aa10.74□□□□□ -0.69
BRCA1-225ENST00000586385 NPSR1Q6W5P4 371 aa10.74□□□□□ -0.69
BRCA1-225ENST00000586385 CXXC5Q7LFL8 322 aaKnown RBP10.74□□□□□ -0.69
BRCA1-225ENST00000586385 ZNF550Q7Z398 422 aa10.74□□□□□ -0.69
BRCA1-225ENST00000586385 COMMD6Q7Z4G1 85 aa10.74□□□□□ -0.69
BRCA1-225ENST00000586385 IFNEQ86WN2 208 aa10.74□□□□□ -0.69
BRCA1-225ENST00000586385 PLCZ1Q86YW0 608 aa10.74□□□□□ -0.69
BRCA1-225ENST00000586385 GRAMD2AQ8IUY3 354 aa10.74□□□□□ -0.69
BRCA1-225ENST00000586385 PLD6Q8N2A8 252 aaKnown RBP10.74□□□□□ -0.69
BRCA1-225ENST00000586385 METTL4Q8N3J2 472 aa10.74□□□□□ -0.69
BRCA1-225ENST00000586385 FBF1Q8TES7 1133 aa10.74□□□□□ -0.69
BRCA1-225ENST00000586385 FIG4Q92562 907 aa10.74□□□□□ -0.69
BRCA1-225ENST00000586385 PIGTQ969N2 578 aa10.74□□□□□ -0.69
BRCA1-225ENST00000586385 TM4SF18Q96CE8 201 aa10.74□□□□□ -0.69
BRCA1-225ENST00000586385 CNRIP1Q96F85 164 aaPredicted RBP10.74□□□□□ -0.69
BRCA1-225ENST00000586385 PIK3IP1Q96FE7 263 aa10.74□□□□□ -0.69
BRCA1-225ENST00000586385 SLC35A4Q96G79 324 aa10.74□□□□□ -0.69
BRCA1-225ENST00000586385 FRG2BQ96QU4 278 aa10.74□□□□□ -0.69
BRCA1-225ENST00000586385 ERP44Q9BS26 406 aa10.74□□□□□ -0.69
BRCA1-225ENST00000586385 BRINP2Q9C0B6 783 aa10.74□□□□□ -0.69
BRCA1-225ENST00000586385 NOL11Q9H8H0 719 aaKnown RBP10.74□□□□□ -0.69
BRCA1-225ENST00000586385 UBTD1Q9HAC8 227 aa10.74□□□□□ -0.69
BRCA1-225ENST00000586385 FARSBQ9NSD9 589 aaKnown RBP10.74□□□□□ -0.69
BRCA1-225ENST00000586385 WHRNQ9P202 907 aa10.74□□□□□ -0.69
BRCA1-225ENST00000586385 BCAP29Q9UHQ4 241 aa10.74□□□□□ -0.69
BRCA1-225ENST00000586385 DLGAP4Q9Y2H0 992 aa10.74□□□□□ -0.69
BRCA1-225ENST00000586385 GPR55Q9Y2T6 319 aaPredicted RBP10.74□□□□□ -0.69
BRCA1-225ENST00000586385 STAB1Q9NY15 2570 aa10.74□□□□□ -0.69
BRCA1-225ENST00000586385 ROS1P08922 2347 aa10.73□□□□□ -0.69
BRCA1-225ENST00000586385 FRG2CA6NGY1 282 aa10.73□□□□□ -0.69
BRCA1-225ENST00000586385 OR6C70A6NIJ9 312 aa10.73□□□□□ -0.69
BRCA1-225ENST00000586385 SYCE1LA8MT33 242 aa10.73□□□□□ -0.69
BRCA1-225ENST00000586385 PPP6CO00743 305 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms