RNA–Protein interactions for RNA: ENST00000568566.5

TSC2-223, Transcript of TSC complex subunit 2, human

TSL 3

Gene TSC2, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TSC2-223	ENST00000568566	SLC37A1	P57057	533 aa		7.72	□□□□□ -1.17
TSC2-223	ENST00000568566	AP2B1	P63010	937 aa		7.72	□□□□□ -1.17
TSC2-223	ENST00000568566	ELAVL1	Q15717	326 aa	Known RBP	7.72	□□□□□ -1.17
TSC2-223	ENST00000568566	NNAT	Q16517	81 aa		7.72	□□□□□ -1.17
TSC2-223	ENST00000568566	ZNF628	Q5EBL2	1059 aa		7.72	□□□□□ -1.17
TSC2-223	ENST00000568566	SPANXN4	Q5MJ08	99 aa		7.72	□□□□□ -1.17
TSC2-223	ENST00000568566	H3F3C	Q6NXT2	135 aa		7.72	□□□□□ -1.17
TSC2-223	ENST00000568566	LYPD8	Q6UX82	237 aa		7.72	□□□□□ -1.17
TSC2-223	ENST00000568566	OLIG3	Q7RTU3	272 aa		7.72	□□□□□ -1.17
TSC2-223	ENST00000568566	TMEM200A	Q86VY9	491 aa		7.72	□□□□□ -1.17
TSC2-223	ENST00000568566	ANKRD46	Q86W74	232 aa		7.72	□□□□□ -1.17
TSC2-223	ENST00000568566	FUNDC1	Q8IVP5	155 aa		7.72	□□□□□ -1.17
TSC2-223	ENST00000568566	PRR22	Q8IZ63	422 aa		7.72	□□□□□ -1.17
TSC2-223	ENST00000568566	ST13P4	Q8IZP2	240 aa	Predicted RBP	7.72	□□□□□ -1.17
TSC2-223	ENST00000568566	ZNF615	Q8N8J6	731 aa		7.72	□□□□□ -1.17
TSC2-223	ENST00000568566	ACBD4	Q8NC06	268 aa		7.72	□□□□□ -1.17
TSC2-223	ENST00000568566	M1AP	Q8TC57	530 aa		7.72	□□□□□ -1.17
TSC2-223	ENST00000568566	ACTRT2	Q8TDY3	377 aa		7.72	□□□□□ -1.17
TSC2-223	ENST00000568566	NRGN	Q92686	78 aa		7.72	□□□□□ -1.17
TSC2-223	ENST00000568566	RIT1	Q92963	219 aa		7.72	□□□□□ -1.17
TSC2-223	ENST00000568566	SDCCAG3	Q96C92	435 aa		7.72	□□□□□ -1.17
TSC2-223	ENST00000568566	PPCDC	Q96CD2	204 aa		7.72	□□□□□ -1.17
TSC2-223	ENST00000568566	CTHRC1	Q96CG8	243 aa		7.72	□□□□□ -1.17
TSC2-223	ENST00000568566	COQ8B	Q96D53	544 aa		7.72	□□□□□ -1.17
TSC2-223	ENST00000568566	C16orf58	Q96GQ5	468 aa		7.72	□□□□□ -1.17
TSC2-223	ENST00000568566	RBM18	Q96H35	190 aa	Known RBP	7.72	□□□□□ -1.17
TSC2-223	ENST00000568566	AMDHD1	Q96NU7	426 aa		7.72	□□□□□ -1.17
TSC2-223	ENST00000568566	SIGLEC12	Q96PQ1	595 aa		7.72	□□□□□ -1.17
TSC2-223	ENST00000568566	FAIM2	Q9BWQ8	316 aa		7.72	□□□□□ -1.17
TSC2-223	ENST00000568566	TMEM120A	Q9BXJ8	343 aa		7.72	□□□□□ -1.17
TSC2-223	ENST00000568566	BRINP2	Q9C0B6	783 aa		7.72	□□□□□ -1.17
TSC2-223	ENST00000568566	ENKD1	Q9H0I2	346 aa		7.72	□□□□□ -1.17
TSC2-223	ENST00000568566	WDR41	Q9HAD4	459 aa		7.72	□□□□□ -1.17
TSC2-223	ENST00000568566	MMP25	Q9NPA2	562 aa		7.72	□□□□□ -1.17
TSC2-223	ENST00000568566	SLC6A13	Q9NSD5	602 aa		7.72	□□□□□ -1.17
TSC2-223	ENST00000568566	TAS2R7	Q9NYW3	318 aa		7.72	□□□□□ -1.17
TSC2-223	ENST00000568566	TEKT2	Q9UIF3	430 aa		7.72	□□□□□ -1.17
TSC2-223	ENST00000568566	PPIE	Q9UNP9	301 aa	Known RBP	7.72	□□□□□ -1.17
TSC2-223	ENST00000568566	KCNE3	Q9Y6H6	103 aa		7.72	□□□□□ -1.17
TSC2-223	ENST00000568566	CLCA3P	Q9Y6N3	262 aa		7.72	□□□□□ -1.17
TSC2-223	ENST00000568566	SPACA6	W5XKT8	324 aa		7.72	□□□□□ -1.17
TSC2-223	ENST00000568566	NSD1	Q96L73	2696 aa	Predicted RBP	7.72	□□□□□ -1.17
TSC2-223	ENST00000568566	JMJD1C	Q15652	2540 aa		7.72	□□□□□ -1.17
TSC2-223	ENST00000568566	ASPDH	A6ND91	283 aa		7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	TRPC5OS	A6NMA1	111 aa		7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	C17orf51	A8MQB3	221 aa		7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	GUCY1B2	O75343	617 aa		7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	ABCB1	P08183	1280 aa	Predicted RBP	7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	PRPS2	P11908	318 aa		7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	ICAM2	P13598	275 aa		7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	COX7A2	P14406	83 aa		7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	CD96	P40200	585 aa		7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	CDKN2C	P42773	168 aa		7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	EMD	P50402	254 aa		7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	NCBP2	P52298	156 aa	Known RBP eCLIP	7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	MLF1	P58340	268 aa		7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	RNF4	P78317	190 aa		7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	FUT7	Q11130	342 aa		7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	MAP4K2	Q12851	820 aa		7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	HSPB3	Q12988	150 aa		7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	TUBA3C	Q13748	450 aa		7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	SERTAD2	Q14140	314 aa		7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	OR1C1	Q15619	314 aa		7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	CEBPE	Q15744	281 aa		7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	GTDC1	Q4AE62	458 aa		7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	KRTCAP3	Q53RY4	240 aa		7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	ACER2	Q5QJU3	275 aa		7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	OGFOD2	Q6N063	350 aa		7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	TUBA3E	Q6PEY2	450 aa		7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	TMEM107	Q6UX40	140 aa		7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	NPSR1	Q6W5P4	371 aa		7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	RPS19BP1	Q86WX3	136 aa	Known RBP	7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	SIAH3	Q8IW03	269 aa		7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	GALNT12	Q8IXK2	581 aa		7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	LRRC25	Q8N386	305 aa	Predicted RBP	7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	MDS2	Q8NDY4	140 aa		7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	OR4N2	Q8NGD1	307 aa		7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	OR52R1	Q8NGF1	315 aa		7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	FBXO30	Q8TB52	745 aa		7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	FRMD6	Q96NE9	622 aa		7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	BBS4	Q96RK4	519 aa		7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	DMRTA2	Q96SC8	542 aa		7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	TREX2	Q9BQ50	279 aa	Predicted RBP	7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	YIPF4	Q9BSR8	244 aa		7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	TMUB1	Q9BVT8	246 aa		7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	ZNF385D	Q9H6B1	395 aa		7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	CCDC134	Q9H6E4	229 aa		7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	CXorf36	Q9H7Y0	433 aa		7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	SLC52A3	Q9NQ40	469 aa		7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	TCF7L2	Q9NQB0	619 aa		7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	MIEF1	Q9NQG6	463 aa		7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	ASIC5	Q9NY37	505 aa		7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	NOP53	Q9NZM5	478 aa	Known RBP	7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	C19orf25	Q9UFG5	118 aa	Predicted RBP	7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	EIF3L	Q9Y262	564 aa	Known RBP	7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	HRH3	Q9Y5N1	445 aa		7.71	□□□□□ -1.18
TSC2-223	ENST00000568566	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		7.7	□□□□□ -1.18
TSC2-223	ENST00000568566		A0A0G2JMM0	328 aa		7.7	□□□□□ -1.18
TSC2-223	ENST00000568566		A0A0G2JND7	137 aa		7.7	□□□□□ -1.18
TSC2-223	ENST00000568566		A0A1W2PPB8	328 aa		7.7	□□□□□ -1.18

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