RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 CCNKO75909 580 aa15.77■□□□□ 0.12
CMTM3-213ENST00000566756 GAAP10253 952 aa15.77■□□□□ 0.12
CMTM3-213ENST00000566756 TNNI3P19429 210 aa15.77■□□□□ 0.12
CMTM3-213ENST00000566756 S100A1P23297 94 aa15.77■□□□□ 0.12
CMTM3-213ENST00000566756 IFNGR2P38484 337 aa15.77■□□□□ 0.12
CMTM3-213ENST00000566756 RPS5P46782 204 aaKnown RBP15.77■□□□□ 0.12
CMTM3-213ENST00000566756 RPS21P63220 83 aaKnown RBP15.77■□□□□ 0.12
CMTM3-213ENST00000566756 CDK3Q00526 305 aa15.77■□□□□ 0.12
CMTM3-213ENST00000566756 DMPKQ09013 629 aa15.77■□□□□ 0.12
CMTM3-213ENST00000566756 TPBGQ13641 420 aa15.77■□□□□ 0.12
CMTM3-213ENST00000566756 CELF2-AS1Q8N7Q2 184 aa15.77■□□□□ 0.12
CMTM3-213ENST00000566756 GPR151Q8TDV0 419 aa15.77■□□□□ 0.12
CMTM3-213ENST00000566756 XAGE5Q8WWM1 108 aa15.77■□□□□ 0.12
CMTM3-213ENST00000566756 GAS2L1Q99501 681 aaPredicted RBP15.77■□□□□ 0.12
CMTM3-213ENST00000566756 DPH7Q9BTV6 452 aa15.77■□□□□ 0.12
CMTM3-213ENST00000566756 C1QTNF2Q9BXJ5 285 aa15.77■□□□□ 0.12
CMTM3-213ENST00000566756 ANKRD19PQ9H560 264 aa15.77■□□□□ 0.12
CMTM3-213ENST00000566756 ZCCHC3Q9NUD5 404 aaKnown RBP15.77■□□□□ 0.12
CMTM3-213ENST00000566756 TXNL4BQ9NX01 149 aaKnown RBP15.77■□□□□ 0.12
CMTM3-213ENST00000566756 C5AR2Q9P296 337 aa15.77■□□□□ 0.12
CMTM3-213ENST00000566756 FEZF1A0PJY2 475 aa15.76■□□□□ 0.11
CMTM3-213ENST00000566756 PRODHO43272 600 aa15.76■□□□□ 0.11
CMTM3-213ENST00000566756 KLF8O95600 359 aaPredicted RBP15.76■□□□□ 0.11
CMTM3-213ENST00000566756 KRT8P05787 483 aa15.76■□□□□ 0.11
CMTM3-213ENST00000566756 SLC35G4P0C7Q5 338 aa15.76■□□□□ 0.11
CMTM3-213ENST00000566756 NR2F6P10588 404 aa15.76■□□□□ 0.11
CMTM3-213ENST00000566756 ACP2P11117 423 aa15.76■□□□□ 0.11
CMTM3-213ENST00000566756 MYL12AP19105 171 aa15.76■□□□□ 0.11
CMTM3-213ENST00000566756 MAGP20916 626 aa15.76■□□□□ 0.11
CMTM3-213ENST00000566756 GPC1P35052 558 aa15.76■□□□□ 0.11
CMTM3-213ENST00000566756 TRIM23P36406 574 aa15.76■□□□□ 0.11
CMTM3-213ENST00000566756 DGKEP52429 567 aa15.76■□□□□ 0.11
CMTM3-213ENST00000566756 GAS1P54826 345 aa15.76■□□□□ 0.11
CMTM3-213ENST00000566756 WNT4P56705 351 aa15.76■□□□□ 0.11
CMTM3-213ENST00000566756 ZNF79Q15937 498 aa15.76■□□□□ 0.11
CMTM3-213ENST00000566756 PLK5Q496M5 336 aa15.76■□□□□ 0.11
CMTM3-213ENST00000566756 NDUFAF5Q5TEU4 345 aa15.76■□□□□ 0.11
CMTM3-213ENST00000566756 XKRXQ6PP77 449 aa15.76■□□□□ 0.11
CMTM3-213ENST00000566756 USP30Q70CQ3 517 aa15.76■□□□□ 0.11
CMTM3-213ENST00000566756 WDR53Q7Z5U6 358 aaPredicted RBP15.76■□□□□ 0.11
CMTM3-213ENST00000566756 OR6F1Q8NGZ6 308 aa15.76■□□□□ 0.11
CMTM3-213ENST00000566756 TRMT61AQ96FX7 289 aaKnown RBP15.76■□□□□ 0.11
CMTM3-213ENST00000566756 WFDC6Q9BQY6 131 aa15.76■□□□□ 0.11
CMTM3-213ENST00000566756 RAB11FIP5Q9BXF6 653 aa15.76■□□□□ 0.11
CMTM3-213ENST00000566756 TEX101Q9BY14 249 aa15.76■□□□□ 0.11
CMTM3-213ENST00000566756 PRRG3Q9BZD7 231 aa15.76■□□□□ 0.11
CMTM3-213ENST00000566756 MIR1-1HGQ9H1L0 117 aa15.76■□□□□ 0.11
CMTM3-213ENST00000566756 NEK6Q9HC98 313 aa15.76■□□□□ 0.11
CMTM3-213ENST00000566756 SNTG1Q9NSN8 517 aa15.76■□□□□ 0.11
CMTM3-213ENST00000566756 C14orf119Q9NWQ9 140 aa15.76■□□□□ 0.11
CMTM3-213ENST00000566756 ZFR2Q9UPR6 939 aaKnown RBP15.76■□□□□ 0.11
CMTM3-213ENST00000566756 LRIT2A6NDA9 550 aa15.76■□□□□ 0.11
CMTM3-213ENST00000566756 M0R3H8 397 aa15.76■□□□□ 0.11
CMTM3-213ENST00000566756 MAN2B1O00754 1011 aa15.76■□□□□ 0.11
CMTM3-213ENST00000566756 SSR2P43308 183 aa15.76■□□□□ 0.11
CMTM3-213ENST00000566756 SLC9A3P48764 834 aa15.76■□□□□ 0.11
CMTM3-213ENST00000566756 PRDX1Q06830 199 aaKnown RBP15.76■□□□□ 0.11
CMTM3-213ENST00000566756 SCN1BQ07699 218 aa15.76■□□□□ 0.11
CMTM3-213ENST00000566756 ASAH1Q13510 395 aa15.76■□□□□ 0.11
CMTM3-213ENST00000566756 ZIC1Q15915 447 aa15.76■□□□□ 0.11
CMTM3-213ENST00000566756 TMEM44Q2T9K0 475 aa15.76■□□□□ 0.11
CMTM3-213ENST00000566756 GLYR1Q49A26 553 aaPredicted RBP15.76■□□□□ 0.11
CMTM3-213ENST00000566756 ARMC4Q5T2S8 1044 aa15.76■□□□□ 0.11
CMTM3-213ENST00000566756 SLC36A4Q6YBV0 504 aa15.76■□□□□ 0.11
CMTM3-213ENST00000566756 CACUL1Q86Y37 369 aa15.76■□□□□ 0.11
CMTM3-213ENST00000566756 GDPD1Q8N9F7 314 aa15.76■□□□□ 0.11
CMTM3-213ENST00000566756 OR56A1Q8NGH5 318 aa15.76■□□□□ 0.11
CMTM3-213ENST00000566756 TMEM163Q8TC26 289 aa15.76■□□□□ 0.11
CMTM3-213ENST00000566756 GNPDA2Q8TDQ7 276 aa15.76■□□□□ 0.11
CMTM3-213ENST00000566756 LRR1Q96L50 414 aa15.76■□□□□ 0.11
CMTM3-213ENST00000566756 NELL2Q99435 816 aa15.76■□□□□ 0.11
CMTM3-213ENST00000566756 OR2B2Q9GZK3 357 aa15.76■□□□□ 0.11
CMTM3-213ENST00000566756 TRPC4Q9UBN4 977 aa15.76■□□□□ 0.11
CMTM3-213ENST00000566756 ZNF221Q9UK13 617 aa15.76■□□□□ 0.11
CMTM3-213ENST00000566756 EXOSC1Q9Y3B2 195 aaKnown RBP15.76■□□□□ 0.11
CMTM3-213ENST00000566756 PRKAB1Q9Y478 270 aa15.76■□□□□ 0.11
CMTM3-213ENST00000566756 EPPINO95925 133 aa15.75■□□□□ 0.11
CMTM3-213ENST00000566756 IL7P13232 177 aa15.75■□□□□ 0.11
CMTM3-213ENST00000566756 COL9A1P20849 921 aa15.75■□□□□ 0.11
CMTM3-213ENST00000566756 MAN2A2P49641 1150 aa15.75■□□□□ 0.11
CMTM3-213ENST00000566756 MINDY4Q4G0A6 757 aa15.75■□□□□ 0.11
CMTM3-213ENST00000566756 RSBN1Q5VWQ0 802 aaPredicted RBP15.75■□□□□ 0.11
CMTM3-213ENST00000566756 LIPKQ5VXJ0 399 aa15.75■□□□□ 0.11
CMTM3-213ENST00000566756 ZNF517Q6ZMY9 492 aaPredicted RBP15.75■□□□□ 0.11
CMTM3-213ENST00000566756 NRARPQ7Z6K4 114 aa15.75■□□□□ 0.11
CMTM3-213ENST00000566756 LAPTM4BQ86VI4 370 aa15.75■□□□□ 0.11
CMTM3-213ENST00000566756 IQCHQ86VS3 1027 aa15.75■□□□□ 0.11
CMTM3-213ENST00000566756 COMTD1Q86VU5 262 aa15.75■□□□□ 0.11
CMTM3-213ENST00000566756 RAB43Q86YS6 212 aa15.75■□□□□ 0.11
CMTM3-213ENST00000566756 LAX1Q8IWV1 398 aa15.75■□□□□ 0.11
CMTM3-213ENST00000566756 TP53I13Q8NBR0 393 aaPredicted RBP15.75■□□□□ 0.11
CMTM3-213ENST00000566756 OR6T1Q8NGN1 323 aa15.75■□□□□ 0.11
CMTM3-213ENST00000566756 AP3S1Q92572 193 aa15.75■□□□□ 0.11
CMTM3-213ENST00000566756 SNX18Q96RF0 628 aa15.75■□□□□ 0.11
CMTM3-213ENST00000566756 PHF7Q9BWX1 381 aaPredicted RBP15.75■□□□□ 0.11
CMTM3-213ENST00000566756 UBE2ZQ9H832 354 aaPredicted RBP15.75■□□□□ 0.11
CMTM3-213ENST00000566756 MUTYHQ9UIF7 546 aa15.75■□□□□ 0.11
CMTM3-213ENST00000566756 FBXW2Q9UKT8 454 aa15.75■□□□□ 0.11
CMTM3-213ENST00000566756 TRIOBPQ9H2D6 2365 aa15.75■□□□□ 0.11
CMTM3-213ENST00000566756 PCCBP05166 539 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms