RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 LYNP07948 512 aa1.22□□□□□ -2.21
SMG1-212ENST00000566328 FHP07954 510 aa1.22□□□□□ -2.21
SMG1-212ENST00000566328 ALOX12P18054 663 aa1.22□□□□□ -2.21
SMG1-212ENST00000566328 CYP2B6P20813 491 aa1.22□□□□□ -2.21
SMG1-212ENST00000566328 BTDP43251 543 aa1.22□□□□□ -2.21
SMG1-212ENST00000566328 CDX1P47902 265 aaPredicted RBP1.22□□□□□ -2.21
SMG1-212ENST00000566328 NT5C2P49902 561 aa1.22□□□□□ -2.21
SMG1-212ENST00000566328 CLNS1AP54105 237 aaKnown RBP1.22□□□□□ -2.21
SMG1-212ENST00000566328 MFAP3P55082 362 aa1.22□□□□□ -2.21
SMG1-212ENST00000566328 ZNF45Q02386 682 aa1.22□□□□□ -2.21
SMG1-212ENST00000566328 EIF4EBP1Q13541 118 aaPredicted RBP1.22□□□□□ -2.21
SMG1-212ENST00000566328 ALCAMQ13740 583 aa1.22□□□□□ -2.21
SMG1-212ENST00000566328 SLC10A1Q14973 349 aa1.22□□□□□ -2.21
SMG1-212ENST00000566328 CCL15Q16663 113 aa1.22□□□□□ -2.21
SMG1-212ENST00000566328 CAVIN4Q5BKX8 364 aa1.22□□□□□ -2.21
SMG1-212ENST00000566328 FAM180BQ6P0A1 224 aa1.22□□□□□ -2.21
SMG1-212ENST00000566328 ZNF433Q8N7K0 673 aaPredicted RBP1.22□□□□□ -2.21
SMG1-212ENST00000566328 TMEM99Q8N816 258 aa1.22□□□□□ -2.21
SMG1-212ENST00000566328 SDR42E1Q8WUS8 393 aa1.22□□□□□ -2.21
SMG1-212ENST00000566328 TFB1MQ8WVM0 346 aaKnown RBP1.22□□□□□ -2.21
SMG1-212ENST00000566328 IL22RA2Q969J5 263 aa1.22□□□□□ -2.21
SMG1-212ENST00000566328 TEKT1Q969V4 418 aa1.22□□□□□ -2.21
SMG1-212ENST00000566328 SLC35C1Q96A29 364 aa1.22□□□□□ -2.21
SMG1-212ENST00000566328 MPP4Q96JB8 637 aa1.22□□□□□ -2.21
SMG1-212ENST00000566328 ABHD1Q96SE0 405 aa1.22□□□□□ -2.21
SMG1-212ENST00000566328 CHCHD6Q9BRQ6 235 aa1.22□□□□□ -2.21
SMG1-212ENST00000566328 CCM2Q9BSQ5 444 aa1.22□□□□□ -2.21
SMG1-212ENST00000566328 KLHL4Q9C0H6 718 aa1.22□□□□□ -2.21
SMG1-212ENST00000566328 MTIF3Q9H2K0 278 aaKnown RBP1.22□□□□□ -2.21
SMG1-212ENST00000566328 GHITMQ9H3K2 345 aa1.22□□□□□ -2.21
SMG1-212ENST00000566328 C5orf66Q9H5L9 145 aa1.22□□□□□ -2.21
SMG1-212ENST00000566328 MLXQ9UH92 298 aa1.22□□□□□ -2.21
SMG1-212ENST00000566328 CHD9Q3L8U1 2897 aa1.22□□□□□ -2.21
SMG1-212ENST00000566328 TIAM2Q8IVF5 1701 aa1.22□□□□□ -2.21
SMG1-212ENST00000566328 BAZ2BQ9UIF8 2168 aaKnown RBP1.22□□□□□ -2.21
SMG1-212ENST00000566328 MYH2Q9UKX2 1941 aa1.22□□□□□ -2.21
SMG1-212ENST00000566328 CDK5RAP2Q96SN8 1893 aa1.22□□□□□ -2.21
SMG1-212ENST00000566328 RIC1Q4ADV7 1423 aa1.22□□□□□ -2.21
SMG1-212ENST00000566328 COL1A2P08123 1366 aa1.21□□□□□ -2.21
SMG1-212ENST00000566328 IBTKQ9P2D0 1353 aaPredicted RBP1.21□□□□□ -2.21
SMG1-212ENST00000566328 MED23Q9ULK4 1368 aa1.21□□□□□ -2.21
SMG1-212ENST00000566328 SSC5DA1L4H1 1573 aa1.21□□□□□ -2.22
SMG1-212ENST00000566328 BCORQ6W2J9 1755 aa1.21□□□□□ -2.22
SMG1-212ENST00000566328 DLEC1Q9Y238 1755 aa1.21□□□□□ -2.22
SMG1-212ENST00000566328 ZNF532Q9HCE3 1301 aa1.21□□□□□ -2.22
SMG1-212ENST00000566328 MYH3P11055 1940 aa1.21□□□□□ -2.22
SMG1-212ENST00000566328 LAMA1P25391 3075 aa1.21□□□□□ -2.22
SMG1-212ENST00000566328 CFAP54Q96N23 3096 aa1.21□□□□□ -2.22
SMG1-212ENST00000566328 SCN7AQ01118 1682 aa1.21□□□□□ -2.22
SMG1-212ENST00000566328 COL1A1P02452 1464 aaPredicted RBP1.21□□□□□ -2.22
SMG1-212ENST00000566328 IGLV8-61A0A075B6I0 122 aa1.21□□□□□ -2.22
SMG1-212ENST00000566328 IGLV4-60A0A075B6I1 120 aa1.21□□□□□ -2.22
SMG1-212ENST00000566328 A0A0U1RQK1 487 aa1.21□□□□□ -2.22
SMG1-212ENST00000566328 CCER2I3L3R5 266 aa1.21□□□□□ -2.22
SMG1-212ENST00000566328 MPHOSPH10O00566 681 aaKnown RBP1.21□□□□□ -2.22
SMG1-212ENST00000566328 DUSP11O75319 330 aaKnown RBP1.21□□□□□ -2.22
SMG1-212ENST00000566328 CNMDO75829 334 aa1.21□□□□□ -2.22
SMG1-212ENST00000566328 CIAO1O76071 339 aa1.21□□□□□ -2.22
SMG1-212ENST00000566328 CD5P06127 495 aa1.21□□□□□ -2.22
SMG1-212ENST00000566328 PGK2P07205 417 aa1.21□□□□□ -2.22
SMG1-212ENST00000566328 CCDC159P0C7I6 412 aa1.21□□□□□ -2.22
SMG1-212ENST00000566328 LAMP1P11279 417 aa1.21□□□□□ -2.22
SMG1-212ENST00000566328 TOP1P11387 765 aaKnown RBP1.21□□□□□ -2.22
SMG1-212ENST00000566328 CCL5P13501 91 aa1.21□□□□□ -2.22
SMG1-212ENST00000566328 AKR1B1P15121 316 aa1.21□□□□□ -2.22
SMG1-212ENST00000566328 FUT3P21217 361 aa1.21□□□□□ -2.22
SMG1-212ENST00000566328 CCND3P30281 292 aaPredicted RBP1.21□□□□□ -2.22
SMG1-212ENST00000566328 AXLP30530 894 aa1.21□□□□□ -2.22
SMG1-212ENST00000566328 NF2P35240 595 aa1.21□□□□□ -2.22
SMG1-212ENST00000566328 ID1P41134 155 aa1.21□□□□□ -2.22
SMG1-212ENST00000566328 FHITP49789 147 aa1.21□□□□□ -2.22
SMG1-212ENST00000566328 RAB28P51157 221 aa1.21□□□□□ -2.22
SMG1-212ENST00000566328 ARHGDIAP52565 204 aa1.21□□□□□ -2.22
SMG1-212ENST00000566328 DIO3P55073 304 aa1.21□□□□□ -2.22
SMG1-212ENST00000566328 CUL4AQ13619 759 aa1.21□□□□□ -2.22
SMG1-212ENST00000566328 EMC2Q15006 297 aa1.21□□□□□ -2.22
SMG1-212ENST00000566328 SGCBQ16585 318 aa1.21□□□□□ -2.22
SMG1-212ENST00000566328 CCDC14Q49A88 953 aa1.21□□□□□ -2.22
SMG1-212ENST00000566328 CCDC158Q5M9N0 1113 aa1.21□□□□□ -2.22
SMG1-212ENST00000566328 C16orf54Q6UWD8 224 aa1.21□□□□□ -2.22
SMG1-212ENST00000566328 LRRC31Q6UY01 552 aa1.21□□□□□ -2.22
SMG1-212ENST00000566328 TFAP2EQ6VUC0 442 aa1.21□□□□□ -2.22
SMG1-212ENST00000566328 ZNF730Q6ZMV8 503 aa1.21□□□□□ -2.22
SMG1-212ENST00000566328 CHST3Q7LGC8 479 aa1.21□□□□□ -2.22
SMG1-212ENST00000566328 MAATS1Q7Z4T9 603 aa1.21□□□□□ -2.22
SMG1-212ENST00000566328 ERO1BQ86YB8 467 aa1.21□□□□□ -2.22
SMG1-212ENST00000566328 DZIP1Q86YF9 867 aaKnown RBP1.21□□□□□ -2.22
SMG1-212ENST00000566328 ZNF786Q8N393 782 aa1.21□□□□□ -2.22
SMG1-212ENST00000566328 TRPV1Q8NER1 839 aa1.21□□□□□ -2.22
SMG1-212ENST00000566328 EXOC6Q8TAG9 804 aa1.21□□□□□ -2.22
SMG1-212ENST00000566328 RAET1EQ8TD07 263 aa1.21□□□□□ -2.22
SMG1-212ENST00000566328 FAM151AQ8WW52 585 aa1.21□□□□□ -2.22
SMG1-212ENST00000566328 SECISBP2LQ93073 1101 aaKnown RBP1.21□□□□□ -2.22
SMG1-212ENST00000566328 BPIFA2Q96DR5 249 aa1.21□□□□□ -2.22
SMG1-212ENST00000566328 ZNF274Q96GC6 653 aaPredicted RBP1.21□□□□□ -2.22
SMG1-212ENST00000566328 TSSK2Q96PF2 358 aa1.21□□□□□ -2.22
SMG1-212ENST00000566328 DEFB118Q96PH6 123 aa1.21□□□□□ -2.22
SMG1-212ENST00000566328 BARD1Q99728 777 aaKnown RBP1.21□□□□□ -2.22
SMG1-212ENST00000566328 APOL6Q9BWW8 343 aa1.21□□□□□ -2.22
SMG1-212ENST00000566328 CHMP4AQ9BY43 222 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms