RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 FAM45AQ8TCE6 357 aa4.31□□□□□ -1.72
SMG1-206ENST00000562668 EEF1AKMT1Q8WVE0 214 aa4.31□□□□□ -1.72
SMG1-206ENST00000562668 TFGQ92734 400 aaPredicted RBP4.31□□□□□ -1.72
SMG1-206ENST00000562668 NAT6Q93015 286 aa4.31□□□□□ -1.72
SMG1-206ENST00000562668 TMEM159Q96B96 161 aa4.31□□□□□ -1.72
SMG1-206ENST00000562668 C3orf49Q96BT1 292 aa4.31□□□□□ -1.72
SMG1-206ENST00000562668 UBXN10Q96LJ8 280 aa4.31□□□□□ -1.72
SMG1-206ENST00000562668 C12orf66Q96MD2 445 aa4.31□□□□□ -1.72
SMG1-206ENST00000562668 PANX3Q96QZ0 392 aa4.31□□□□□ -1.72
SMG1-206ENST00000562668 CYTH2Q99418 400 aa4.31□□□□□ -1.72
SMG1-206ENST00000562668 PAFAH2Q99487 392 aa4.31□□□□□ -1.72
SMG1-206ENST00000562668 PKP4Q99569 1192 aa4.31□□□□□ -1.72
SMG1-206ENST00000562668 TSPYL1Q9H0U9 437 aa4.31□□□□□ -1.72
SMG1-206ENST00000562668 ABCG4Q9H172 646 aa4.31□□□□□ -1.72
SMG1-206ENST00000562668 VPS37BQ9H9H4 285 aa4.31□□□□□ -1.72
SMG1-206ENST00000562668 POPDC3Q9HBV1 291 aa4.31□□□□□ -1.72
SMG1-206ENST00000562668 PPANQ9NQ55 473 aaKnown RBP4.31□□□□□ -1.72
SMG1-206ENST00000562668 IMP3Q9NV31 184 aaKnown RBP4.31□□□□□ -1.72
SMG1-206ENST00000562668 NSMCE4AQ9NXX6 385 aa4.31□□□□□ -1.72
SMG1-206ENST00000562668 EPHA6Q9UF33 1036 aa4.31□□□□□ -1.72
SMG1-206ENST00000562668 FETUBQ9UGM5 382 aa4.31□□□□□ -1.72
SMG1-206ENST00000562668 SNRNP200O75643 2136 aaKnown RBP4.31□□□□□ -1.72
SMG1-206ENST00000562668 A0A087WUV0 522 aaPredicted RBP4.3□□□□□ -1.72
SMG1-206ENST00000562668 IGHV5-10-1A0A0J9YXX1 117 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 OR5K3A6NET4 321 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 C17orf100A8MU93 164 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 CDC7O00311 574 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 RASGRF2O14827 1237 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 PFDN6O15212 129 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 KIF1CO43896 1103 aaKnown RBP4.3□□□□□ -1.72
SMG1-206ENST00000562668 VPS26AO75436 327 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 CPNE6O95741 557 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 APOA4P06727 396 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 NUDT17P0C025 328 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 CD1DP15813 335 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 CHN1P15882 459 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 MCM3P25205 808 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 PKLRP30613 574 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 PHBP35232 272 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 HSD17B3P37058 310 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 HALP42357 657 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 BDKRB1P46663 353 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 GABRA4P48169 554 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 GFERP55789 205 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 RAB10P61026 200 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 ABRQ12979 859 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 SNTA1Q13424 505 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 C16orf72Q14CZ0 275 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 RASA2Q15283 850 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 PHKG1Q16816 387 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 PFKFB4Q16877 469 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 ISXQ2M1V0 245 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 HES3Q5TGS1 186 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 PGBD2Q6P3X8 592 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 EMBQ6PCB8 327 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 WDR74Q6RFH5 385 aaPredicted RBP4.3□□□□□ -1.72
SMG1-206ENST00000562668 OTOAQ7RTW8 1153 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 DGLUCYQ7Z3D6 616 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 CMC1Q7Z7K0 106 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 TDRPQ86YL5 185 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 CTAGE3PQ8IX95 158 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 TBC1D21Q8IYX1 336 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 CENPLQ8N0S6 344 aaPredicted RBP4.3□□□□□ -1.72
SMG1-206ENST00000562668 MUC20Q8N307 709 aaPredicted RBP4.3□□□□□ -1.72
SMG1-206ENST00000562668 BMPERQ8N8U9 685 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 GPATCH11Q8N954 259 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 Q8N9G6 341 aaPredicted RBP4.3□□□□□ -1.72
SMG1-206ENST00000562668 AVL9Q8NBF6 648 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 HMGCLL1Q8TB92 370 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 ANKRD7Q92527 254 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 CDKL2Q92772 493 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 SH3KBP1Q96B97 665 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 PTERQ96BW5 349 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 CXorf40BQ96DE9 158 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 ATXN7L3BQ96GX2 97 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 ELMO2Q96JJ3 720 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 PPM1MQ96MI6 270 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 IL17FQ96PD4 163 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 HGH1Q9BTY7 390 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 TSSK1BQ9BXA7 367 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 PITPNM3Q9BZ71 974 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 XKR8Q9H6D3 395 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 MVB12BQ9H7P6 319 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 RDH14Q9HBH5 336 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 SPHK1Q9NYA1 384 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 TAS2R13Q9NYV9 303 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 CTNNAL1Q9UBT7 734 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 KLK13Q9UKR3 277 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 PLAGL1Q9UM63 463 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 PDE10AQ9Y233 779 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 LRCH1Q9Y2L9 728 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 HEBP2Q9Y5Z4 205 aa4.3□□□□□ -1.72
SMG1-206ENST00000562668 GOLGA4Q13439 2230 aaKnown RBP4.3□□□□□ -1.72
SMG1-206ENST00000562668 CNOT1A5YKK6 2376 aaKnown RBP4.29□□□□□ -1.72
SMG1-206ENST00000562668 IGHV5-51A0A0C4DH38 117 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 IGKV1-8A0A0C4DH67 115 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 DYTNA2CJ06 578 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 FAM149AA5PLN7 773 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 FAM90A20PA6NIJ5 464 aa4.29□□□□□ -1.72
SMG1-206ENST00000562668 E5RI56 91 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms