RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 ZNF382Q96SR6 550 aa12.51□□□□□ -0.41
SMAD3-214ENST00000560402 ZNF559Q9BR84 538 aa12.51□□□□□ -0.41
SMAD3-214ENST00000560402 WDR55Q9H6Y2 383 aaPredicted RBP12.51□□□□□ -0.41
SMAD3-214ENST00000560402 ZNF703Q9H7S9 590 aaPredicted RBP12.51□□□□□ -0.41
SMAD3-214ENST00000560402 LYARQ9NX58 379 aaKnown RBP12.51□□□□□ -0.41
SMAD3-214ENST00000560402 QPCTLQ9NXS2 382 aa12.51□□□□□ -0.41
SMAD3-214ENST00000560402 TNFRSF10DQ9UBN6 386 aa12.51□□□□□ -0.41
SMAD3-214ENST00000560402 PCTPQ9UKL6 214 aa12.51□□□□□ -0.41
SMAD3-214ENST00000560402 PCDHGB3Q9Y5G1 929 aa12.51□□□□□ -0.41
SMAD3-214ENST00000560402 PCDHGA11Q9Y5H2 935 aa12.51□□□□□ -0.41
SMAD3-214ENST00000560402 MYOCOSA0A1B0GUC4 107 aa12.5□□□□□ -0.41
SMAD3-214ENST00000560402 OR6C76A6NM76 312 aa12.5□□□□□ -0.41
SMAD3-214ENST00000560402 G3V3Y1 287 aa12.5□□□□□ -0.41
SMAD3-214ENST00000560402 GSC2O15499 205 aa12.5□□□□□ -0.41
SMAD3-214ENST00000560402 UGDHO60701 494 aa12.5□□□□□ -0.41
SMAD3-214ENST00000560402 SIX3O95343 332 aaPredicted RBP12.5□□□□□ -0.41
SMAD3-214ENST00000560402 ETHE1O95571 254 aa12.5□□□□□ -0.41
SMAD3-214ENST00000560402 COX4I1P13073 169 aa12.5□□□□□ -0.41
SMAD3-214ENST00000560402 CD1EP15812 388 aa12.5□□□□□ -0.41
SMAD3-214ENST00000560402 PIK3R1P27986 724 aa12.5□□□□□ -0.41
SMAD3-214ENST00000560402 PEX19P40855 299 aa12.5□□□□□ -0.41
SMAD3-214ENST00000560402 ZFP36L2P47974 494 aaKnown RBP12.5□□□□□ -0.41
SMAD3-214ENST00000560402 DNASE1L1P49184 302 aa12.5□□□□□ -0.41
SMAD3-214ENST00000560402 CDH13P55290 713 aa12.5□□□□□ -0.41
SMAD3-214ENST00000560402 SLAMF1Q13291 335 aa12.5□□□□□ -0.41
SMAD3-214ENST00000560402 CUL3Q13618 768 aa12.5□□□□□ -0.41
SMAD3-214ENST00000560402 CYLC2Q14093 348 aaPredicted RBP12.5□□□□□ -0.41
SMAD3-214ENST00000560402 SLC10A1Q14973 349 aa12.5□□□□□ -0.41
SMAD3-214ENST00000560402 ZNF791Q3KP31 576 aaPredicted RBP12.5□□□□□ -0.41
SMAD3-214ENST00000560402 SLC25A35Q3KQZ1 300 aa12.5□□□□□ -0.41
SMAD3-214ENST00000560402 LIPJQ5W064 366 aa12.5□□□□□ -0.41
SMAD3-214ENST00000560402 SLC22A10Q63ZE4 541 aa12.5□□□□□ -0.41
SMAD3-214ENST00000560402 ZNF585AQ6P3V2 769 aa12.5□□□□□ -0.41
SMAD3-214ENST00000560402 SLC29A4Q7RTT9 530 aa12.5□□□□□ -0.41
SMAD3-214ENST00000560402 GPR180Q86V85 440 aa12.5□□□□□ -0.41
SMAD3-214ENST00000560402 TREML1Q86YW5 311 aa12.5□□□□□ -0.41
SMAD3-214ENST00000560402 CCDC71Q8IV32 467 aaPredicted RBP12.5□□□□□ -0.41
SMAD3-214ENST00000560402 C9orf40Q8IXQ3 194 aa12.5□□□□□ -0.41
SMAD3-214ENST00000560402 FBXW8Q8N3Y1 598 aa12.5□□□□□ -0.41
SMAD3-214ENST00000560402 HUS1BQ8NHY5 278 aa12.5□□□□□ -0.41
SMAD3-214ENST00000560402 TWIST2Q8WVJ9 160 aa12.5□□□□□ -0.41
SMAD3-214ENST00000560402 STMN2Q93045 179 aa12.5□□□□□ -0.41
SMAD3-214ENST00000560402 RBM18Q96H35 190 aaKnown RBP12.5□□□□□ -0.41
SMAD3-214ENST00000560402 PPP1R36Q96LQ0 422 aa12.5□□□□□ -0.41
SMAD3-214ENST00000560402 SERPINI1Q99574 410 aa12.5□□□□□ -0.41
SMAD3-214ENST00000560402 TTYH2Q9BSA4 534 aa12.5□□□□□ -0.41
SMAD3-214ENST00000560402 LDAHQ9H6V9 325 aa12.5□□□□□ -0.41
SMAD3-214ENST00000560402 SH2D2AQ9NP31 389 aa12.5□□□□□ -0.41
SMAD3-214ENST00000560402 SEMA4BQ9NPR2 832 aaPredicted RBP12.5□□□□□ -0.41
SMAD3-214ENST00000560402 DMRT3Q9NQL9 472 aa12.5□□□□□ -0.41
SMAD3-214ENST00000560402 TUBA8Q9NY65 449 aaPredicted RBP12.5□□□□□ -0.41
SMAD3-214ENST00000560402 CNIH4Q9P003 139 aa12.5□□□□□ -0.41
SMAD3-214ENST00000560402 B4GALT7Q9UBV7 327 aa12.5□□□□□ -0.41
SMAD3-214ENST00000560402 BAIAP2L1Q9UHR4 511 aa12.5□□□□□ -0.41
SMAD3-214ENST00000560402 FAM215AQ9Y5M1 114 aa12.5□□□□□ -0.41
SMAD3-214ENST00000560402 EXPH5Q8NEV8 1989 aa12.5□□□□□ -0.41
SMAD3-214ENST00000560402 TRGV5A0A0B4J1U4 118 aa12.49□□□□□ -0.41
SMAD3-214ENST00000560402 TMEM233B4DJY2 109 aa12.49□□□□□ -0.41
SMAD3-214ENST00000560402 PLPP1O14494 284 aa12.49□□□□□ -0.41
SMAD3-214ENST00000560402 ZNF354AO60765 605 aaPredicted RBP12.49□□□□□ -0.41
SMAD3-214ENST00000560402 NADKO95544 446 aaPredicted RBP12.49□□□□□ -0.41
SMAD3-214ENST00000560402 LBPP18428 481 aa12.49□□□□□ -0.41
SMAD3-214ENST00000560402 HMOX2P30519 316 aa12.49□□□□□ -0.41
SMAD3-214ENST00000560402 GALNSP34059 522 aa12.49□□□□□ -0.41
SMAD3-214ENST00000560402 CPA2P48052 419 aa12.49□□□□□ -0.41
SMAD3-214ENST00000560402 ID2Q02363 134 aa12.49□□□□□ -0.41
SMAD3-214ENST00000560402 FOLH1Q04609 750 aa12.49□□□□□ -0.41
SMAD3-214ENST00000560402 STX5Q13190 355 aa12.49□□□□□ -0.41
SMAD3-214ENST00000560402 DDX39BQ13838 428 aaKnown RBP12.49□□□□□ -0.41
SMAD3-214ENST00000560402 RPS6KA2Q15349 733 aa12.49□□□□□ -0.41
SMAD3-214ENST00000560402 TBCELQ5QJ74 424 aa12.49□□□□□ -0.41
SMAD3-214ENST00000560402 C1orf185Q5T7R7 199 aa12.49□□□□□ -0.41
SMAD3-214ENST00000560402 RIPPLY2Q5TAB7 128 aa12.49□□□□□ -0.41
SMAD3-214ENST00000560402 RINLQ6ZS11 566 aa12.49□□□□□ -0.41
SMAD3-214ENST00000560402 SPATA19Q7Z5L4 167 aa12.49□□□□□ -0.41
SMAD3-214ENST00000560402 OR5M9Q8NGP3 310 aa12.49□□□□□ -0.41
SMAD3-214ENST00000560402 OR10Q1Q8NGQ4 319 aa12.49□□□□□ -0.41
SMAD3-214ENST00000560402 UCK2Q9BZX2 261 aa12.49□□□□□ -0.41
SMAD3-214ENST00000560402 OR51B5Q9H339 312 aa12.49□□□□□ -0.41
SMAD3-214ENST00000560402 WDR41Q9HAD4 459 aa12.49□□□□□ -0.41
SMAD3-214ENST00000560402 TAS2R1Q9NYW7 299 aa12.49□□□□□ -0.41
SMAD3-214ENST00000560402 BCAP29Q9UHQ4 241 aa12.49□□□□□ -0.41
SMAD3-214ENST00000560402 ACAD8Q9UKU7 415 aa12.49□□□□□ -0.41
SMAD3-214ENST00000560402 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.49□□□□□ -0.41
SMAD3-214ENST00000560402 NCKAP5O14513 1909 aa12.49□□□□□ -0.41
SMAD3-214ENST00000560402 ANKHD1Q8IWZ3 2542 aaKnown RBP12.48□□□□□ -0.41
SMAD3-214ENST00000560402 ATP6AP2A0A1C7CYW4 349 aa12.48□□□□□ -0.41
SMAD3-214ENST00000560402 H0YIV9 168 aa12.48□□□□□ -0.41
SMAD3-214ENST00000560402 SAP18O00422 153 aaKnown RBP12.48□□□□□ -0.41
SMAD3-214ENST00000560402 ATP6AP2O75787 350 aa12.48□□□□□ -0.41
SMAD3-214ENST00000560402 ATP6V1G2O95670 118 aa12.48□□□□□ -0.41
SMAD3-214ENST00000560402 FBXO45P0C2W1 286 aa12.48□□□□□ -0.41
SMAD3-214ENST00000560402 GLI4P10075 376 aa12.48□□□□□ -0.41
SMAD3-214ENST00000560402 NR2F6P10588 404 aa12.48□□□□□ -0.41
SMAD3-214ENST00000560402 PTX3P26022 381 aaPredicted RBP12.48□□□□□ -0.41
SMAD3-214ENST00000560402 NR0B1P51843 470 aaKnown RBP12.48□□□□□ -0.41
SMAD3-214ENST00000560402 CCNG1P51959 295 aa12.48□□□□□ -0.41
SMAD3-214ENST00000560402 GTF2H2Q13888 395 aa12.48□□□□□ -0.41
SMAD3-214ENST00000560402 EBPQ15125 230 aaKnown RBP12.48□□□□□ -0.41
SMAD3-214ENST00000560402 GSTA3Q16772 222 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms