RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 KLRF1Q9NZS2 232 aa11.54□□□□□ -0.56
RABGGTA-213ENST00000560127 PTBP2Q9UKA9 531 aaKnown RBP11.54□□□□□ -0.56
RABGGTA-213ENST00000560127 FBXL2Q9UKC9 423 aa11.54□□□□□ -0.56
RABGGTA-213ENST00000560127 CDC42EP3Q9UKI2 254 aa11.54□□□□□ -0.56
RABGGTA-213ENST00000560127 CHMP2BQ9UQN3 213 aa11.54□□□□□ -0.56
RABGGTA-213ENST00000560127 ASB4Q9Y574 426 aa11.54□□□□□ -0.56
RABGGTA-213ENST00000560127 PKD1L1Q8TDX9 2849 aa11.54□□□□□ -0.56
RABGGTA-213ENST00000560127 HEATR1Q9H583 2144 aaKnown RBP11.53□□□□□ -0.56
RABGGTA-213ENST00000560127 PLPP1O14494 284 aa11.53□□□□□ -0.56
RABGGTA-213ENST00000560127 TMPRSS11DO60235 418 aa11.53□□□□□ -0.56
RABGGTA-213ENST00000560127 ADAM11O75078 769 aa11.53□□□□□ -0.56
RABGGTA-213ENST00000560127 STK16O75716 305 aa11.53□□□□□ -0.56
RABGGTA-213ENST00000560127 AIFM1O95831 613 aa11.53□□□□□ -0.56
RABGGTA-213ENST00000560127 IGHV4-39P01824 125 aa11.53□□□□□ -0.56
RABGGTA-213ENST00000560127 THBS1P07996 1170 aa11.53□□□□□ -0.56
RABGGTA-213ENST00000560127 SOD3P08294 240 aa11.53□□□□□ -0.56
RABGGTA-213ENST00000560127 NR2F6P10588 404 aa11.53□□□□□ -0.56
RABGGTA-213ENST00000560127 PCNAP12004 261 aa11.53□□□□□ -0.56
RABGGTA-213ENST00000560127 NAGAP17050 411 aa11.53□□□□□ -0.56
RABGGTA-213ENST00000560127 TCEA1P23193 301 aaKnown RBP11.53□□□□□ -0.56
RABGGTA-213ENST00000560127 SRD5A2P31213 254 aa11.53□□□□□ -0.56
RABGGTA-213ENST00000560127 CDKN1AP38936 164 aa11.53□□□□□ -0.56
RABGGTA-213ENST00000560127 BUD31P41223 144 aaPredicted RBP11.53□□□□□ -0.56
RABGGTA-213ENST00000560127 CLDN15P56746 228 aa11.53□□□□□ -0.56
RABGGTA-213ENST00000560127 TAS2R39P59534 338 aa11.53□□□□□ -0.56
RABGGTA-213ENST00000560127 GUSBP1Q15486 140 aa11.53□□□□□ -0.56
RABGGTA-213ENST00000560127 BCL2A1Q16548 175 aa11.53□□□□□ -0.56
RABGGTA-213ENST00000560127 UBAP2Q5T6F2 1119 aaKnown RBP11.53□□□□□ -0.56
RABGGTA-213ENST00000560127 MRM1Q6IN84 353 aaKnown RBP11.53□□□□□ -0.56
RABGGTA-213ENST00000560127 GALNT12Q8IXK2 581 aa11.53□□□□□ -0.56
RABGGTA-213ENST00000560127 LAS2Q8IYD9 372 aa11.53□□□□□ -0.56
RABGGTA-213ENST00000560127 LILRB1Q8NHL6 650 aaPredicted RBP11.53□□□□□ -0.56
RABGGTA-213ENST00000560127 RGMAQ96B86 450 aa11.53□□□□□ -0.56
RABGGTA-213ENST00000560127 REPS1Q96D71 796 aa11.53□□□□□ -0.56
RABGGTA-213ENST00000560127 TRMT61AQ96FX7 289 aaKnown RBP11.53□□□□□ -0.56
RABGGTA-213ENST00000560127 ZNF717Q9BY31 904 aaPredicted RBP11.53□□□□□ -0.56
RABGGTA-213ENST00000560127 AMBRA1Q9C0C7 1298 aa11.53□□□□□ -0.56
RABGGTA-213ENST00000560127 CNOT10Q9H9A5 744 aaKnown RBP11.53□□□□□ -0.56
RABGGTA-213ENST00000560127 PRM3Q9NNZ6 103 aa11.53□□□□□ -0.56
RABGGTA-213ENST00000560127 ESYT3A0FGR9 886 aa11.52□□□□□ -0.57
RABGGTA-213ENST00000560127 PRAMEF25A6NGN4 478 aa11.52□□□□□ -0.57
RABGGTA-213ENST00000560127 B4DXG7 233 aa11.52□□□□□ -0.57
RABGGTA-213ENST00000560127 ZIC3O60481 467 aa11.52□□□□□ -0.57
RABGGTA-213ENST00000560127 UGT2B11O75310 529 aa11.52□□□□□ -0.57
RABGGTA-213ENST00000560127 EEDO75530 441 aaKnown RBP11.52□□□□□ -0.57
RABGGTA-213ENST00000560127 URI1O94763 535 aaPredicted RBP11.52□□□□□ -0.57
RABGGTA-213ENST00000560127 DANCRP0C864 163 aa11.52□□□□□ -0.57
RABGGTA-213ENST00000560127 PPP3CBP16298 524 aa11.52□□□□□ -0.57
RABGGTA-213ENST00000560127 S1PR1P21453 382 aa11.52□□□□□ -0.57
RABGGTA-213ENST00000560127 RAP1GDS1P52306 607 aa11.52□□□□□ -0.57
RABGGTA-213ENST00000560127 B3GALT5-AS1P59052 145 aa11.52□□□□□ -0.57
RABGGTA-213ENST00000560127 RUNX1T1Q06455 604 aa11.52□□□□□ -0.57
RABGGTA-213ENST00000560127 WHAMMP3Q1A5X7 153 aa11.52□□□□□ -0.57
RABGGTA-213ENST00000560127 EXOC3L2Q2M3D2 409 aa11.52□□□□□ -0.57
RABGGTA-213ENST00000560127 MED27Q6P2C8 311 aa11.52□□□□□ -0.57
RABGGTA-213ENST00000560127 CHMP1BQ7LBR1 199 aa11.52□□□□□ -0.57
RABGGTA-213ENST00000560127 ZC3HC1Q86WB0 502 aaKnown RBP11.52□□□□□ -0.57
RABGGTA-213ENST00000560127 PLCZ1Q86YW0 608 aa11.52□□□□□ -0.57
RABGGTA-213ENST00000560127 ANKMY2Q8IV38 441 aa11.52□□□□□ -0.57
RABGGTA-213ENST00000560127 OR7G3Q8NG95 312 aa11.52□□□□□ -0.57
RABGGTA-213ENST00000560127 RAB3IL1Q8TBN0 382 aa11.52□□□□□ -0.57
RABGGTA-213ENST00000560127 OMA1Q96E52 524 aa11.52□□□□□ -0.57
RABGGTA-213ENST00000560127 RNF122Q9H9V4 155 aa11.52□□□□□ -0.57
RABGGTA-213ENST00000560127 EHD3Q9NZN3 535 aa11.52□□□□□ -0.57
RABGGTA-213ENST00000560127 WHRNQ9P202 907 aa11.52□□□□□ -0.57
RABGGTA-213ENST00000560127 PROCRQ9UNN8 238 aa11.52□□□□□ -0.57
RABGGTA-213ENST00000560127 MRPS18CQ9Y3D5 142 aaKnown RBP11.52□□□□□ -0.57
RABGGTA-213ENST00000560127 PSAT1Q9Y617 370 aa11.52□□□□□ -0.57
RABGGTA-213ENST00000560127 A0A096LNT2 108 aa11.51□□□□□ -0.57
RABGGTA-213ENST00000560127 A0A0A6YYD5 115 aa11.51□□□□□ -0.57
RABGGTA-213ENST00000560127 FAM95CA0A1B0GW59 222 aa11.51□□□□□ -0.57
RABGGTA-213ENST00000560127 H0YC42 278 aa11.51□□□□□ -0.57
RABGGTA-213ENST00000560127 PGRMC2O15173 223 aa11.51□□□□□ -0.57
RABGGTA-213ENST00000560127 NDUFS7O75251 213 aa11.51□□□□□ -0.57
RABGGTA-213ENST00000560127 SERPINB1P30740 379 aa11.51□□□□□ -0.57
RABGGTA-213ENST00000560127 THBS2P35442 1172 aa11.51□□□□□ -0.57
RABGGTA-213ENST00000560127 SUCLG1P53597 346 aaKnown RBP11.51□□□□□ -0.57
RABGGTA-213ENST00000560127 TPD52P55327 224 aaPredicted RBP11.51□□□□□ -0.57
RABGGTA-213ENST00000560127 HMGCS1Q01581 520 aa11.51□□□□□ -0.57
RABGGTA-213ENST00000560127 SLC7A5Q01650 507 aa11.51□□□□□ -0.57
RABGGTA-213ENST00000560127 DDX39BQ13838 428 aaKnown RBP11.51□□□□□ -0.57
RABGGTA-213ENST00000560127 FGFBP1Q14512 234 aa11.51□□□□□ -0.57
RABGGTA-213ENST00000560127 CDKL4Q5MAI5 379 aa11.51□□□□□ -0.57
RABGGTA-213ENST00000560127 SULT1C3Q6IMI6 304 aa11.51□□□□□ -0.57
RABGGTA-213ENST00000560127 ADAM5Q6NVV9 412 aa11.51□□□□□ -0.57
RABGGTA-213ENST00000560127 STAC2Q6ZMT1 411 aa11.51□□□□□ -0.57
RABGGTA-213ENST00000560127 WFDC8Q8IUA0 241 aa11.51□□□□□ -0.57
RABGGTA-213ENST00000560127 UBQLNLQ8IYU4 475 aa11.51□□□□□ -0.57
RABGGTA-213ENST00000560127 SPATA6LQ8N4H0 392 aa11.51□□□□□ -0.57
RABGGTA-213ENST00000560127 OR7G1Q8NGA0 311 aa11.51□□□□□ -0.57
RABGGTA-213ENST00000560127 HUS1BQ8NHY5 278 aa11.51□□□□□ -0.57
RABGGTA-213ENST00000560127 FNDC9Q8TBE3 224 aa11.51□□□□□ -0.57
RABGGTA-213ENST00000560127 UBE2E3Q969T4 207 aa11.51□□□□□ -0.57
RABGGTA-213ENST00000560127 GTPBP3Q969Y2 492 aaKnown RBP11.51□□□□□ -0.57
RABGGTA-213ENST00000560127 CFAP36Q96G28 342 aa11.51□□□□□ -0.57
RABGGTA-213ENST00000560127 NAT9Q9BTE0 207 aa11.51□□□□□ -0.57
RABGGTA-213ENST00000560127 LRRC1Q9BTT6 524 aa11.51□□□□□ -0.57
RABGGTA-213ENST00000560127 BEX2Q9BXY8 128 aa11.51□□□□□ -0.57
RABGGTA-213ENST00000560127 ITPAQ9BY32 194 aa11.51□□□□□ -0.57
RABGGTA-213ENST00000560127 SMYD2Q9NRG4 433 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms