RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 RFTN2Q52LD8 501 aaPredicted RBP14.03□□□□□ -0.16
RPL28-207ENST00000558815 EMC4Q5J8M3 183 aa14.03□□□□□ -0.16
RPL28-207ENST00000558815 NUDCD3Q8IVD9 361 aa14.03□□□□□ -0.16
RPL28-207ENST00000558815 CLYBLQ8N0X4 340 aa14.03□□□□□ -0.16
RPL28-207ENST00000558815 SLC34A3Q8N130 599 aa14.03□□□□□ -0.16
RPL28-207ENST00000558815 PHF10Q8WUB8 498 aaKnown RBP14.03□□□□□ -0.16
RPL28-207ENST00000558815 TMBIM1Q969X1 311 aa14.03□□□□□ -0.16
RPL28-207ENST00000558815 ZIM3Q96PE6 472 aa14.03□□□□□ -0.16
RPL28-207ENST00000558815 NODALQ96S42 347 aa14.03□□□□□ -0.16
RPL28-207ENST00000558815 DMRTA2Q96SC8 542 aa14.03□□□□□ -0.16
RPL28-207ENST00000558815 GLIPR2Q9H4G4 154 aa14.03□□□□□ -0.16
RPL28-207ENST00000558815 FOLH1BQ9HBA9 442 aa14.03□□□□□ -0.16
RPL28-207ENST00000558815 RYDENQ9NUL5 291 aaKnown RBP14.03□□□□□ -0.16
RPL28-207ENST00000558815 KLRF1Q9NZS2 232 aa14.03□□□□□ -0.16
RPL28-207ENST00000558815 GIMAP2Q9UG22 337 aa14.03□□□□□ -0.16
RPL28-207ENST00000558815 ACAD8Q9UKU7 415 aa14.03□□□□□ -0.16
RPL28-207ENST00000558815 EXO1Q9UQ84 846 aaKnown RBP14.03□□□□□ -0.16
RPL28-207ENST00000558815 DNAJC13O75165 2243 aa14.02□□□□□ -0.16
RPL28-207ENST00000558815 FREM3P0C091 2139 aa14.02□□□□□ -0.16
RPL28-207ENST00000558815 FRG2CA6NGY1 282 aa14.02□□□□□ -0.17
RPL28-207ENST00000558815 AQP7O14520 342 aa14.02□□□□□ -0.17
RPL28-207ENST00000558815 BCKDKO14874 412 aa14.02□□□□□ -0.17
RPL28-207ENST00000558815 ACOX3O15254 700 aa14.02□□□□□ -0.17
RPL28-207ENST00000558815 TRIM3O75382 744 aaPredicted RBP14.02□□□□□ -0.17
RPL28-207ENST00000558815 SDC1P18827 310 aa14.02□□□□□ -0.17
RPL28-207ENST00000558815 DRD5P21918 477 aa14.02□□□□□ -0.17
RPL28-207ENST00000558815 KRT20P35900 424 aa14.02□□□□□ -0.17
RPL28-207ENST00000558815 CASP3P42574 277 aa14.02□□□□□ -0.17
RPL28-207ENST00000558815 CEBPEQ15744 281 aa14.02□□□□□ -0.17
RPL28-207ENST00000558815 WLSQ5T9L3 541 aa14.02□□□□□ -0.17
RPL28-207ENST00000558815 ANGPTL8Q6UXH0 198 aa14.02□□□□□ -0.17
RPL28-207ENST00000558815 IKBIPQ70UQ0 350 aa14.02□□□□□ -0.17
RPL28-207ENST00000558815 NUP54Q7Z3B4 507 aa14.02□□□□□ -0.17
RPL28-207ENST00000558815 PACS2Q86VP3 889 aa14.02□□□□□ -0.17
RPL28-207ENST00000558815 SLC44A2Q8IWA5 706 aaPredicted RBP14.02□□□□□ -0.17
RPL28-207ENST00000558815 MARVELD2Q8N4S9 558 aa14.02□□□□□ -0.17
RPL28-207ENST00000558815 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.02□□□□□ -0.17
RPL28-207ENST00000558815 HGDQ93099 445 aa14.02□□□□□ -0.17
RPL28-207ENST00000558815 SARAFQ96BY9 339 aa14.02□□□□□ -0.17
RPL28-207ENST00000558815 GNRHR2Q96P88 292 aa14.02□□□□□ -0.17
RPL28-207ENST00000558815 SECISBP2Q96T21 854 aaKnown RBP14.02□□□□□ -0.17
RPL28-207ENST00000558815 OSBPL11Q9BXB4 747 aa14.02□□□□□ -0.17
RPL28-207ENST00000558815 ANGPTL4Q9BY76 406 aa14.02□□□□□ -0.17
RPL28-207ENST00000558815 DDX18Q9NVP1 670 aaKnown RBP14.02□□□□□ -0.17
RPL28-207ENST00000558815 TAS2R9Q9NYW1 312 aa14.02□□□□□ -0.17
RPL28-207ENST00000558815 COQ3Q9NZJ6 369 aa14.02□□□□□ -0.17
RPL28-207ENST00000558815 SPRR3Q9UBC9 169 aa14.02□□□□□ -0.17
RPL28-207ENST00000558815 BAIAP2L1Q9UHR4 511 aa14.02□□□□□ -0.17
RPL28-207ENST00000558815 GPR55Q9Y2T6 319 aaPredicted RBP14.02□□□□□ -0.17
RPL28-207ENST00000558815 WBP11Q9Y2W2 641 aaKnown RBP14.02□□□□□ -0.17
RPL28-207ENST00000558815 OR10H1Q9Y4A9 318 aa14.02□□□□□ -0.17
RPL28-207ENST00000558815 ANKRD33BA6NCL7 494 aa14.01□□□□□ -0.17
RPL28-207ENST00000558815 OR14I1A6ND48 311 aa14.01□□□□□ -0.17
RPL28-207ENST00000558815 LSM1O15116 133 aaKnown RBP14.01□□□□□ -0.17
RPL28-207ENST00000558815 PDPK1O15530 556 aa14.01□□□□□ -0.17
RPL28-207ENST00000558815 PLOD3O60568 738 aa14.01□□□□□ -0.17
RPL28-207ENST00000558815 PEX11AO75192 247 aa14.01□□□□□ -0.17
RPL28-207ENST00000558815 COQ9O75208 318 aa14.01□□□□□ -0.17
RPL28-207ENST00000558815 SNX4O95219 450 aa14.01□□□□□ -0.17
RPL28-207ENST00000558815 CLDN14O95500 239 aa14.01□□□□□ -0.17
RPL28-207ENST00000558815 FGF4P08620 206 aa14.01□□□□□ -0.17
RPL28-207ENST00000558815 NAGAP17050 411 aa14.01□□□□□ -0.17
RPL28-207ENST00000558815 ENDOUP21128 410 aaKnown RBP14.01□□□□□ -0.17
RPL28-207ENST00000558815 IL12BP29460 328 aa14.01□□□□□ -0.17
RPL28-207ENST00000558815 ARRB2P32121 409 aa14.01□□□□□ -0.17
RPL28-207ENST00000558815 GPC1P35052 558 aa14.01□□□□□ -0.17
RPL28-207ENST00000558815 ETV4P43268 484 aa14.01□□□□□ -0.17
RPL28-207ENST00000558815 SERPINB4P48594 390 aa14.01□□□□□ -0.17
RPL28-207ENST00000558815 HSPB3Q12988 150 aa14.01□□□□□ -0.17
RPL28-207ENST00000558815 ZNF385BQ569K4 471 aa14.01□□□□□ -0.17
RPL28-207ENST00000558815 TMEM211Q6ICI0 200 aa14.01□□□□□ -0.17
RPL28-207ENST00000558815 NPSR1Q6W5P4 371 aa14.01□□□□□ -0.17
RPL28-207ENST00000558815 ZNF551Q7Z340 670 aaPredicted RBP14.01□□□□□ -0.17
RPL28-207ENST00000558815 SZRD1Q7Z422 152 aa14.01□□□□□ -0.17
RPL28-207ENST00000558815 WDR53Q7Z5U6 358 aaPredicted RBP14.01□□□□□ -0.17
RPL28-207ENST00000558815 EXOC3L1Q86VI1 746 aa14.01□□□□□ -0.17
RPL28-207ENST00000558815 CA5BP1Q8WTZ4 195 aa14.01□□□□□ -0.17
RPL28-207ENST00000558815 MARVELD3Q96A59 401 aa14.01□□□□□ -0.17
RPL28-207ENST00000558815 CIDECQ96AQ7 238 aaPredicted RBP14.01□□□□□ -0.17
RPL28-207ENST00000558815 PPCDCQ96CD2 204 aa14.01□□□□□ -0.17
RPL28-207ENST00000558815 ERP27Q96DN0 273 aa14.01□□□□□ -0.17
RPL28-207ENST00000558815 METTL2AQ96IZ6 378 aaKnown RBP14.01□□□□□ -0.17
RPL28-207ENST00000558815 VSTM2LQ96N03 204 aa14.01□□□□□ -0.17
RPL28-207ENST00000558815 AMDHD1Q96NU7 426 aa14.01□□□□□ -0.17
RPL28-207ENST00000558815 COL21A1Q96P44 957 aa14.01□□□□□ -0.17
RPL28-207ENST00000558815 BTBD9Q96Q07 612 aa14.01□□□□□ -0.17
RPL28-207ENST00000558815 ADOQ96SZ5 270 aa14.01□□□□□ -0.17
RPL28-207ENST00000558815 CCT7Q99832 543 aa14.01□□□□□ -0.17
RPL28-207ENST00000558815 STMN4Q9H169 189 aaPredicted RBP14.01□□□□□ -0.17
RPL28-207ENST00000558815 GALNT9Q9HCQ5 603 aa14.01□□□□□ -0.17
RPL28-207ENST00000558815 KCNK9Q9NPC2 374 aa14.01□□□□□ -0.17
RPL28-207ENST00000558815 SH3BP4Q9P0V3 963 aa14.01□□□□□ -0.17
RPL28-207ENST00000558815 ZDHHC2Q9UIJ5 367 aa14.01□□□□□ -0.17
RPL28-207ENST00000558815 MAPRE3Q9UPY8 281 aa14.01□□□□□ -0.17
RPL28-207ENST00000558815 KLF2Q9Y5W3 355 aaPredicted RBP14.01□□□□□ -0.17
RPL28-207ENST00000558815 PCNX1Q96RV3 2341 aa14□□□□□ -0.17
RPL28-207ENST00000558815 C15orf38-AP3S2A0A0A6YYH1 394 aa14□□□□□ -0.17
RPL28-207ENST00000558815 A0A1B0GVC2 190 aa14□□□□□ -0.17
RPL28-207ENST00000558815 PRAMEF25A6NGN4 478 aa14□□□□□ -0.17
RPL28-207ENST00000558815 FIGNL2A6NMB9 653 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms