RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 DDX39BQ13838 428 aaKnown RBP11.28□□□□□ -0.6
PSEN1-221ENST00000557293 OR5M10Q6IEU7 315 aa11.28□□□□□ -0.6
PSEN1-221ENST00000557293 ADAM5Q6NVV9 412 aa11.28□□□□□ -0.6
PSEN1-221ENST00000557293 AAGABQ6PD74 315 aa11.28□□□□□ -0.6
PSEN1-221ENST00000557293 STAC2Q6ZMT1 411 aa11.28□□□□□ -0.6
PSEN1-221ENST00000557293 P4HA3Q7Z4N8 544 aa11.28□□□□□ -0.6
PSEN1-221ENST00000557293 RAB3IL1Q8TBN0 382 aa11.28□□□□□ -0.6
PSEN1-221ENST00000557293 AKAP1Q92667 903 aaKnown RBP eCLIP11.28□□□□□ -0.6
PSEN1-221ENST00000557293 MTERF1Q99551 399 aaKnown RBP11.28□□□□□ -0.6
PSEN1-221ENST00000557293 ITPAQ9BY32 194 aa11.28□□□□□ -0.6
PSEN1-221ENST00000557293 CAB39LQ9H9S4 337 aa11.28□□□□□ -0.6
PSEN1-221ENST00000557293 SMYD2Q9NRG4 433 aa11.28□□□□□ -0.6
PSEN1-221ENST00000557293 PLSCR4Q9NRQ2 329 aa11.28□□□□□ -0.6
PSEN1-221ENST00000557293 EHD3Q9NZN3 535 aa11.28□□□□□ -0.6
PSEN1-221ENST00000557293 CD274Q9NZQ7 290 aa11.28□□□□□ -0.6
PSEN1-221ENST00000557293 CHMP2BQ9UQN3 213 aa11.28□□□□□ -0.6
PSEN1-221ENST00000557293 YLPM1P49750 1951 aaKnown RBP11.27□□□□□ -0.61
PSEN1-221ENST00000557293 PCNX3Q9H6A9 2034 aa11.27□□□□□ -0.61
PSEN1-221ENST00000557293 PIAS1O75925 651 aa11.27□□□□□ -0.61
PSEN1-221ENST00000557293 IGHV4-39P01824 125 aa11.27□□□□□ -0.61
PSEN1-221ENST00000557293 GBAP04062 536 aa11.27□□□□□ -0.61
PSEN1-221ENST00000557293 CCDC166P0CW27 439 aa11.27□□□□□ -0.61
PSEN1-221ENST00000557293 CPMP14384 443 aa11.27□□□□□ -0.61
PSEN1-221ENST00000557293 KRT15P19012 456 aa11.27□□□□□ -0.61
PSEN1-221ENST00000557293 TCEA1P23193 301 aaKnown RBP11.27□□□□□ -0.61
PSEN1-221ENST00000557293 PTX3P26022 381 aaPredicted RBP11.27□□□□□ -0.61
PSEN1-221ENST00000557293 SRSF2Q01130 221 aaKnown RBP11.27□□□□□ -0.61
PSEN1-221ENST00000557293 DUSP2Q05923 314 aa11.27□□□□□ -0.61
PSEN1-221ENST00000557293 MGAT5Q09328 741 aa11.27□□□□□ -0.61
PSEN1-221ENST00000557293 EXOSC7Q15024 291 aaKnown RBP11.27□□□□□ -0.61
PSEN1-221ENST00000557293 ETFDHQ16134 617 aa11.27□□□□□ -0.61
PSEN1-221ENST00000557293 PRICKLE4Q2TBC4 344 aa11.27□□□□□ -0.61
PSEN1-221ENST00000557293 GRHL2Q6ISB3 625 aa11.27□□□□□ -0.61
PSEN1-221ENST00000557293 ZNF662Q6ZS27 426 aa11.27□□□□□ -0.61
PSEN1-221ENST00000557293 LRRC70Q7Z2Q7 622 aa11.27□□□□□ -0.61
PSEN1-221ENST00000557293 FNDC9Q8TBE3 224 aa11.27□□□□□ -0.61
PSEN1-221ENST00000557293 REPS1Q96D71 796 aa11.27□□□□□ -0.61
PSEN1-221ENST00000557293 LCORQ96JN0 433 aaPredicted RBP11.27□□□□□ -0.61
PSEN1-221ENST00000557293 UBXN10Q96LJ8 280 aa11.27□□□□□ -0.61
PSEN1-221ENST00000557293 C19orf24Q9BVV8 132 aa11.27□□□□□ -0.61
PSEN1-221ENST00000557293 RHOJQ9H4E5 214 aa11.27□□□□□ -0.61
PSEN1-221ENST00000557293 MAT2BQ9NZL9 334 aa11.27□□□□□ -0.61
PSEN1-221ENST00000557293 KLRF1Q9NZS2 232 aa11.27□□□□□ -0.61
PSEN1-221ENST00000557293 CES1P1Q9UKY3 287 aa11.27□□□□□ -0.61
PSEN1-221ENST00000557293 ZNF337Q9Y3M9 751 aa11.27□□□□□ -0.61
PSEN1-221ENST00000557293 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.26□□□□□ -0.61
PSEN1-221ENST00000557293 ALPK2Q86TB3 2170 aa11.26□□□□□ -0.61
PSEN1-221ENST00000557293 TO15178 435 aa11.26□□□□□ -0.61
PSEN1-221ENST00000557293 PHGDHO43175 533 aaKnown RBP11.26□□□□□ -0.61
PSEN1-221ENST00000557293 ADAM11O75078 769 aa11.26□□□□□ -0.61
PSEN1-221ENST00000557293 AQP8O94778 261 aa11.26□□□□□ -0.61
PSEN1-221ENST00000557293 CBX7O95931 251 aa11.26□□□□□ -0.61
PSEN1-221ENST00000557293 PEPDP12955 493 aa11.26□□□□□ -0.61
PSEN1-221ENST00000557293 PPP3CBP16298 524 aa11.26□□□□□ -0.61
PSEN1-221ENST00000557293 DRD5P21918 477 aa11.26□□□□□ -0.61
PSEN1-221ENST00000557293 DPP4P27487 766 aa11.26□□□□□ -0.61
PSEN1-221ENST00000557293 PIK3R1P27986 724 aa11.26□□□□□ -0.61
PSEN1-221ENST00000557293 CDKN1AP38936 164 aa11.26□□□□□ -0.61
PSEN1-221ENST00000557293 PPICP45877 212 aa11.26□□□□□ -0.61
PSEN1-221ENST00000557293 PLCXD2Q0VAA5 305 aa11.26□□□□□ -0.61
PSEN1-221ENST00000557293 OR52E8Q6IFG1 317 aa11.26□□□□□ -0.61
PSEN1-221ENST00000557293 FAM214BQ7L5A3 538 aa11.26□□□□□ -0.61
PSEN1-221ENST00000557293 UBQLNLQ8IYU4 475 aa11.26□□□□□ -0.61
PSEN1-221ENST00000557293 OR4K14Q8NGD5 310 aa11.26□□□□□ -0.61
PSEN1-221ENST00000557293 NEUROG1Q92886 237 aa11.26□□□□□ -0.61
PSEN1-221ENST00000557293 TRMT61AQ96FX7 289 aaKnown RBP11.26□□□□□ -0.61
PSEN1-221ENST00000557293 PINK1Q9BXM7 581 aa11.26□□□□□ -0.61
PSEN1-221ENST00000557293 LZTFL1Q9NQ48 299 aa11.26□□□□□ -0.61
PSEN1-221ENST00000557293 PROCRQ9UNN8 238 aa11.26□□□□□ -0.61
PSEN1-221ENST00000557293 LIPT1Q9Y234 373 aa11.26□□□□□ -0.61
PSEN1-221ENST00000557293 ANK2Q01484 3957 aa11.25□□□□□ -0.61
PSEN1-221ENST00000557293 OR6C70A6NIJ9 312 aa11.25□□□□□ -0.61
PSEN1-221ENST00000557293 K7EPI3 171 aa11.25□□□□□ -0.61
PSEN1-221ENST00000557293 ACOX3O15254 700 aa11.25□□□□□ -0.61
PSEN1-221ENST00000557293 TSPAN2O60636 221 aa11.25□□□□□ -0.61
PSEN1-221ENST00000557293 CD8AP01732 235 aa11.25□□□□□ -0.61
PSEN1-221ENST00000557293 CTAGE8P0CG41 777 aa11.25□□□□□ -0.61
PSEN1-221ENST00000557293 PORP16435 677 aaPredicted RBP11.25□□□□□ -0.61
PSEN1-221ENST00000557293 EPB42P16452 691 aa11.25□□□□□ -0.61
PSEN1-221ENST00000557293 IL11P20809 199 aa11.25□□□□□ -0.61
PSEN1-221ENST00000557293 NT5EP21589 574 aa11.25□□□□□ -0.61
PSEN1-221ENST00000557293 EMDP50402 254 aa11.25□□□□□ -0.61
PSEN1-221ENST00000557293 CLDN20P56880 219 aa11.25□□□□□ -0.61
PSEN1-221ENST00000557293 POU4F1Q01851 419 aa11.25□□□□□ -0.61
PSEN1-221ENST00000557293 OCRLQ01968 901 aa11.25□□□□□ -0.61
PSEN1-221ENST00000557293 DLG1Q12959 904 aa11.25□□□□□ -0.61
PSEN1-221ENST00000557293 CUL3Q13618 768 aa11.25□□□□□ -0.61
PSEN1-221ENST00000557293 EXOC3L2Q2M3D2 409 aa11.25□□□□□ -0.61
PSEN1-221ENST00000557293 TRMT12Q53H54 448 aaKnown RBP11.25□□□□□ -0.61
PSEN1-221ENST00000557293 C6orf52Q5T4I8 152 aa11.25□□□□□ -0.61
PSEN1-221ENST00000557293 CYP20A1Q6UW02 462 aa11.25□□□□□ -0.61
PSEN1-221ENST00000557293 ISCA2Q86U28 154 aa11.25□□□□□ -0.61
PSEN1-221ENST00000557293 WFDC8Q8IUA0 241 aa11.25□□□□□ -0.61
PSEN1-221ENST00000557293 CTAGE4Q8IX94 777 aa11.25□□□□□ -0.61
PSEN1-221ENST00000557293 TMBIM1Q969X1 311 aa11.25□□□□□ -0.61
PSEN1-221ENST00000557293 SLC35A4Q96G79 324 aa11.25□□□□□ -0.61
PSEN1-221ENST00000557293 COL21A1Q96P44 957 aa11.25□□□□□ -0.61
PSEN1-221ENST00000557293 WDR41Q9HAD4 459 aa11.25□□□□□ -0.61
PSEN1-221ENST00000557293 WHRNQ9P202 907 aa11.25□□□□□ -0.61
PSEN1-221ENST00000557293 GDF2Q9UK05 429 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms