RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 ADAMDEC1O15204 470 aa18.38■□□□□ 0.53
SSH1-209ENST00000551165 ZNF749O43361 778 aa18.38■□□□□ 0.53
SSH1-209ENST00000551165 HNRNPCL4P0DMR1 293 aa18.38■□□□□ 0.53
SSH1-209ENST00000551165 S1PR1P21453 382 aa18.38■□□□□ 0.53
SSH1-209ENST00000551165 CCL7P80098 99 aa18.38■□□□□ 0.53
SSH1-209ENST00000551165 NR0B2Q15466 257 aa18.38■□□□□ 0.53
SSH1-209ENST00000551165 TRIM61Q5EBN2 209 aa18.38■□□□□ 0.53
SSH1-209ENST00000551165 RNF220Q5VTB9 566 aa18.38■□□□□ 0.53
SSH1-209ENST00000551165 FAHD1Q6P587 224 aa18.38■□□□□ 0.53
SSH1-209ENST00000551165 KRT73Q86Y46 540 aa18.38■□□□□ 0.53
SSH1-209ENST00000551165 SLC5A8Q8N695 610 aa18.38■□□□□ 0.53
SSH1-209ENST00000551165 OR6C4Q8NGE1 309 aa18.38■□□□□ 0.53
SSH1-209ENST00000551165 OR9Q2Q8NGE9 314 aa18.38■□□□□ 0.53
SSH1-209ENST00000551165 TRNT1Q96Q11 434 aaKnown RBP18.38■□□□□ 0.53
SSH1-209ENST00000551165 FEVQ99581 238 aa18.38■□□□□ 0.53
SSH1-209ENST00000551165 RIBC2Q9H4K1 309 aa18.38■□□□□ 0.53
SSH1-209ENST00000551165 GPR55Q9Y2T6 319 aaPredicted RBP18.38■□□□□ 0.53
SSH1-209ENST00000551165 FRS3O43559 492 aa18.38■□□□□ 0.53
SSH1-209ENST00000551165 CTNSO60931 367 aa18.38■□□□□ 0.53
SSH1-209ENST00000551165 ETS2P15036 469 aa18.38■□□□□ 0.53
SSH1-209ENST00000551165 ITGA2P17301 1181 aa18.38■□□□□ 0.53
SSH1-209ENST00000551165 ELK4P28324 431 aa18.38■□□□□ 0.53
SSH1-209ENST00000551165 AVPR1BP47901 424 aa18.38■□□□□ 0.53
SSH1-209ENST00000551165 STX4Q12846 297 aa18.38■□□□□ 0.53
SSH1-209ENST00000551165 TTC33Q6PID6 262 aaPredicted RBP18.38■□□□□ 0.53
SSH1-209ENST00000551165 ZC3H14Q6PJT7 736 aaKnown RBP18.38■□□□□ 0.53
SSH1-209ENST00000551165 PRR23CQ6ZRP0 262 aa18.38■□□□□ 0.53
SSH1-209ENST00000551165 ST13P4Q8IZP2 240 aaPredicted RBP18.38■□□□□ 0.53
SSH1-209ENST00000551165 OR52R1Q8NGF1 315 aa18.38■□□□□ 0.53
SSH1-209ENST00000551165 ZNF675Q8TD23 568 aa18.38■□□□□ 0.53
SSH1-209ENST00000551165 RDH12Q96NR8 316 aa18.38■□□□□ 0.53
SSH1-209ENST00000551165 CXorf21Q9HAI6 301 aa18.38■□□□□ 0.53
SSH1-209ENST00000551165 NECTIN3Q9NQS3 549 aa18.38■□□□□ 0.53
SSH1-209ENST00000551165 C3orf18Q9UK00 162 aa18.38■□□□□ 0.53
SSH1-209ENST00000551165 FAM32AQ9Y421 112 aaKnown RBP18.38■□□□□ 0.53
SSH1-209ENST00000551165 ADAMTS20P59510 1910 aa18.38■□□□□ 0.53
SSH1-209ENST00000551165 DSPPQ9NZW4 1301 aa18.37■□□□□ 0.53
SSH1-209ENST00000551165 A0A087WV62 115 aa18.37■□□□□ 0.53
SSH1-209ENST00000551165 LOC100130705A0A1B0GUX0 176 aa18.37■□□□□ 0.53
SSH1-209ENST00000551165 CLDN24A6NM45 220 aa18.37■□□□□ 0.53
SSH1-209ENST00000551165 RHCEP18577 417 aa18.37■□□□□ 0.53
SSH1-209ENST00000551165 SSTR4P31391 388 aa18.37■□□□□ 0.53
SSH1-209ENST00000551165 LIMS1P48059 325 aa18.37■□□□□ 0.53
SSH1-209ENST00000551165 RNF144AP50876 292 aaPredicted RBP18.37■□□□□ 0.53
SSH1-209ENST00000551165 EXOSC6Q5RKV6 272 aaKnown RBP18.37■□□□□ 0.53
SSH1-209ENST00000551165 ATAD3BQ5T9A4 648 aa18.37■□□□□ 0.53
SSH1-209ENST00000551165 FRRS1Q6ZNA5 592 aa18.37■□□□□ 0.53
SSH1-209ENST00000551165 PRSS42Q7Z5A4 293 aa18.37■□□□□ 0.53
SSH1-209ENST00000551165 PIK3C3Q8NEB9 887 aa18.37■□□□□ 0.53
SSH1-209ENST00000551165 OR6T1Q8NGN1 323 aa18.37■□□□□ 0.53
SSH1-209ENST00000551165 RMND5BQ96G75 393 aaPredicted RBP18.37■□□□□ 0.53
SSH1-209ENST00000551165 YIPF2Q9BWQ6 316 aa18.37■□□□□ 0.53
SSH1-209ENST00000551165 PCDHGA8Q9Y5G5 932 aa18.37■□□□□ 0.53
SSH1-209ENST00000551165 GADD45GO95257 159 aa18.37■□□□□ 0.53
SSH1-209ENST00000551165 FOXB2Q5VYV0 432 aa18.37■□□□□ 0.53
SSH1-209ENST00000551165 VWA5B2Q8N398 1253 aa18.37■□□□□ 0.53
SSH1-209ENST00000551165 GIPC3Q8TF64 312 aa18.37■□□□□ 0.53
SSH1-209ENST00000551165 NIPSNAP1Q9BPW8 284 aa18.37■□□□□ 0.53
SSH1-209ENST00000551165 CTPS2Q9NRF8 586 aa18.37■□□□□ 0.53
SSH1-209ENST00000551165 KIF17Q9P2E2 1029 aa18.37■□□□□ 0.53
SSH1-209ENST00000551165 PDP2Q9P2J9 529 aa18.37■□□□□ 0.53
SSH1-209ENST00000551165 AASSQ9UDR5 926 aa18.37■□□□□ 0.53
SSH1-209ENST00000551165 GMEB2Q9UKD1 530 aa18.37■□□□□ 0.53
SSH1-209ENST00000551165 LIPT1Q9Y234 373 aa18.37■□□□□ 0.53
SSH1-209ENST00000551165 MYRFQ9Y2G1 1151 aa18.37■□□□□ 0.53
SSH1-209ENST00000551165 CFAP54Q96N23 3096 aa18.36■□□□□ 0.53
SSH1-209ENST00000551165 TTC28Q96AY4 2481 aa18.36■□□□□ 0.53
SSH1-209ENST00000551165 GXYLT2A0PJZ3 443 aa18.36■□□□□ 0.53
SSH1-209ENST00000551165 RPLP0P05388 317 aaKnown RBP18.36■□□□□ 0.53
SSH1-209ENST00000551165 GCGRP47871 477 aa18.36■□□□□ 0.53
SSH1-209ENST00000551165 CLK3P49761 638 aaKnown RBP18.36■□□□□ 0.53
SSH1-209ENST00000551165 EFNA3P52797 238 aa18.36■□□□□ 0.53
SSH1-209ENST00000551165 PIN1Q13526 163 aaPredicted RBP18.36■□□□□ 0.53
SSH1-209ENST00000551165 C1orf189Q5VU69 101 aa18.36■□□□□ 0.53
SSH1-209ENST00000551165 TYW3Q6IPR3 259 aaKnown RBP18.36■□□□□ 0.53
SSH1-209ENST00000551165 ZNF595Q8IYB9 648 aa18.36■□□□□ 0.53
SSH1-209ENST00000551165 OR10G2Q8NGC3 310 aa18.36■□□□□ 0.53
SSH1-209ENST00000551165 ZNF501Q96CX3 271 aaPredicted RBP18.36■□□□□ 0.53
SSH1-209ENST00000551165 SDF2Q99470 211 aa18.36■□□□□ 0.53
SSH1-209ENST00000551165 BTBD2Q9BX70 525 aa18.36■□□□□ 0.53
SSH1-209ENST00000551165 SYNDIG1Q9H7V2 258 aa18.36■□□□□ 0.53
SSH1-209ENST00000551165 NMNAT1Q9HAN9 279 aaPredicted RBP18.36■□□□□ 0.53
SSH1-209ENST00000551165 FGF21Q9NSA1 209 aa18.36■□□□□ 0.53
SSH1-209ENST00000551165 KRT84Q9NSB2 600 aa18.36■□□□□ 0.53
SSH1-209ENST00000551165 DNAAF2Q9NVR5 837 aaKnown RBP18.36■□□□□ 0.53
SSH1-209ENST00000551165 KCND3Q9UK17 655 aa18.36■□□□□ 0.53
SSH1-209ENST00000551165 FBXO4Q9UKT5 387 aa18.36■□□□□ 0.53
SSH1-209ENST00000551165 DTX4Q9Y2E6 619 aa18.36■□□□□ 0.53
SSH1-209ENST00000551165 TRBV4-1A0A0J9YWV2 114 aa18.35■□□□□ 0.53
SSH1-209ENST00000551165 DUXAA6NLW8 204 aa18.35■□□□□ 0.53
SSH1-209ENST00000551165 H0YIG0 161 aa18.35■□□□□ 0.53
SSH1-209ENST00000551165 LGI1O95970 557 aa18.35■□□□□ 0.53
SSH1-209ENST00000551165 TFAP2AP05549 437 aa18.35■□□□□ 0.53
SSH1-209ENST00000551165 LINGO3P0C6S8 592 aa18.35■□□□□ 0.53
SSH1-209ENST00000551165 PABPC4LP0CB38 370 aaKnown RBP18.35■□□□□ 0.53
SSH1-209ENST00000551165 POU2F1P14859 743 aa18.35■□□□□ 0.53
SSH1-209ENST00000551165 RAD23AP54725 363 aa18.35■□□□□ 0.53
SSH1-209ENST00000551165 SKP1P63208 163 aa18.35■□□□□ 0.53
SSH1-209ENST00000551165 GNA13Q14344 377 aa18.35■□□□□ 0.53
SSH1-209ENST00000551165 NPTX1Q15818 432 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms