RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 ZNF530Q6P9A1 599 aaPredicted RBP1.54□□□□□ -2.16
CEP290-204ENST00000547926 B3GLCTQ6Y288 498 aa1.54□□□□□ -2.16
CEP290-204ENST00000547926 KRT77Q7Z794 578 aa1.54□□□□□ -2.16
CEP290-204ENST00000547926 SFRP1Q8N474 314 aa1.54□□□□□ -2.16
CEP290-204ENST00000547926 LPCAT1Q8NF37 534 aa1.54□□□□□ -2.16
CEP290-204ENST00000547926 OR52J3Q8NH60 311 aa1.54□□□□□ -2.16
CEP290-204ENST00000547926 FNDC8Q8TC99 324 aa1.54□□□□□ -2.16
CEP290-204ENST00000547926 ST7LQ8TDW4 575 aa1.54□□□□□ -2.16
CEP290-204ENST00000547926 FRAT1Q92837 279 aaPredicted RBP1.54□□□□□ -2.16
CEP290-204ENST00000547926 PTP4A1Q93096 173 aa1.54□□□□□ -2.16
CEP290-204ENST00000547926 TECTBQ96PL2 329 aa1.54□□□□□ -2.16
CEP290-204ENST00000547926 NLNQ9BYT8 704 aa1.54□□□□□ -2.16
CEP290-204ENST00000547926 ASB8Q9H765 288 aa1.54□□□□□ -2.16
CEP290-204ENST00000547926 IL1RAPL2Q9NP60 686 aa1.54□□□□□ -2.16
CEP290-204ENST00000547926 ERVK-18Q9QC07 812 aa1.54□□□□□ -2.16
CEP290-204ENST00000547926 MRPS2Q9Y399 296 aaKnown RBP1.54□□□□□ -2.16
CEP290-204ENST00000547926 NPC1L1Q9UHC9 1359 aa1.54□□□□□ -2.16
CEP290-204ENST00000547926 GTF3C1Q12789 2109 aa1.54□□□□□ -2.16
CEP290-204ENST00000547926 LRRD1A4D1F6 860 aa1.54□□□□□ -2.16
CEP290-204ENST00000547926 FAM231BA6NCW3 169 aa1.54□□□□□ -2.16
CEP290-204ENST00000547926 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP1.54□□□□□ -2.16
CEP290-204ENST00000547926 PANO1I0J062 215 aa1.54□□□□□ -2.16
CEP290-204ENST00000547926 EEF2KO00418 725 aaKnown RBP1.54□□□□□ -2.16
CEP290-204ENST00000547926 SLC17A2O00624 439 aa1.54□□□□□ -2.16
CEP290-204ENST00000547926 ECDO95905 644 aaPredicted RBP1.54□□□□□ -2.16
CEP290-204ENST00000547926 FERP16591 822 aa1.54□□□□□ -2.16
CEP290-204ENST00000547926 TRPC1P48995 793 aa1.54□□□□□ -2.16
CEP290-204ENST00000547926 NLRP11P59045 1033 aaKnown RBP1.54□□□□□ -2.16
CEP290-204ENST00000547926 ZNF674Q2M3X9 581 aa1.54□□□□□ -2.16
CEP290-204ENST00000547926 ATRAIDQ6UW56 229 aa1.54□□□□□ -2.16
CEP290-204ENST00000547926 IGFL2Q6UWQ7 119 aa1.54□□□□□ -2.16
CEP290-204ENST00000547926 CCDC170Q8IYT3 715 aa1.54□□□□□ -2.16
CEP290-204ENST00000547926 PYROXD2Q8N2H3 581 aa1.54□□□□□ -2.16
CEP290-204ENST00000547926 DNAJA3Q96EY1 480 aa1.54□□□□□ -2.16
CEP290-204ENST00000547926 C5orf30Q96GV9 206 aa1.54□□□□□ -2.16
CEP290-204ENST00000547926 KIR2DL4Q99706 377 aa1.54□□□□□ -2.16
CEP290-204ENST00000547926 APOOQ9BUR5 198 aa1.54□□□□□ -2.16
CEP290-204ENST00000547926 CWC25Q9NXE8 425 aaPredicted RBP1.54□□□□□ -2.16
CEP290-204ENST00000547926 ADAM22Q9P0K1 906 aa1.54□□□□□ -2.16
CEP290-204ENST00000547926 AKAP7Q9P0M2 348 aaPredicted RBP1.54□□□□□ -2.16
CEP290-204ENST00000547926 SNX5Q9Y5X3 404 aa1.54□□□□□ -2.16
CEP290-204ENST00000547926 ARID1AO14497 2285 aa1.53□□□□□ -2.16
CEP290-204ENST00000547926 IGLV8-61A0A075B6I0 122 aa1.53□□□□□ -2.16
CEP290-204ENST00000547926 A0A1W2PRV1 198 aa1.53□□□□□ -2.16
CEP290-204ENST00000547926 LCMT2O60294 686 aaKnown RBP1.53□□□□□ -2.16
CEP290-204ENST00000547926 FMO6PO60774 539 aa1.53□□□□□ -2.16
CEP290-204ENST00000547926 SDC3O75056 442 aa1.53□□□□□ -2.16
CEP290-204ENST00000547926 ATP6V1G1O75348 118 aa1.53□□□□□ -2.16
CEP290-204ENST00000547926 STAM2O75886 525 aa1.53□□□□□ -2.16
CEP290-204ENST00000547926 HSPB1P04792 205 aaKnown RBP1.53□□□□□ -2.16
CEP290-204ENST00000547926 SERPINF2P08697 491 aa1.53□□□□□ -2.16
CEP290-204ENST00000547926 HOXB7P09629 217 aa1.53□□□□□ -2.16
CEP290-204ENST00000547926 IGHV1-2P23083 117 aa1.53□□□□□ -2.16
CEP290-204ENST00000547926 NPY2RP49146 381 aa1.53□□□□□ -2.16
CEP290-204ENST00000547926 KIAA1024LP59773 190 aa1.53□□□□□ -2.16
CEP290-204ENST00000547926 RPS8P62241 208 aaKnown RBP1.53□□□□□ -2.16
CEP290-204ENST00000547926 EIF4EBP2Q13542 120 aaPredicted RBP1.53□□□□□ -2.16
CEP290-204ENST00000547926 SMU1Q2TAY7 513 aa1.53□□□□□ -2.16
CEP290-204ENST00000547926 ZNF658Q5TYW1 1059 aaPredicted RBP1.53□□□□□ -2.16
CEP290-204ENST00000547926 PRAMEF7Q5VXH5 474 aa1.53□□□□□ -2.16
CEP290-204ENST00000547926 WSCD1Q658N2 575 aa1.53□□□□□ -2.16
CEP290-204ENST00000547926 PRR5LQ6MZQ0 368 aa1.53□□□□□ -2.16
CEP290-204ENST00000547926 BNIPLQ7Z465 357 aa1.53□□□□□ -2.16
CEP290-204ENST00000547926 TGIF2LYQ8IUE0 185 aa1.53□□□□□ -2.16
CEP290-204ENST00000547926 TFB1MQ8WVM0 346 aaKnown RBP1.53□□□□□ -2.16
CEP290-204ENST00000547926 PTPRUQ92729 1446 aa1.53□□□□□ -2.16
CEP290-204ENST00000547926 SLCO4A1Q96BD0 722 aa1.53□□□□□ -2.16
CEP290-204ENST00000547926 SLC25A38Q96DW6 304 aa1.53□□□□□ -2.16
CEP290-204ENST00000547926 C11orf24Q96F05 449 aaPredicted RBP1.53□□□□□ -2.16
CEP290-204ENST00000547926 DEFB118Q96PH6 123 aa1.53□□□□□ -2.16
CEP290-204ENST00000547926 HCAR1Q9BXC0 346 aa1.53□□□□□ -2.16
CEP290-204ENST00000547926 ZNF702PQ9H963 129 aa1.53□□□□□ -2.16
CEP290-204ENST00000547926 KCNMB3Q9NPA1 279 aa1.53□□□□□ -2.16
CEP290-204ENST00000547926 PIGVQ9NUD9 493 aa1.53□□□□□ -2.16
CEP290-204ENST00000547926 NDUFA13Q9P0J0 144 aa1.53□□□□□ -2.16
CEP290-204ENST00000547926 RPS6KB2Q9UBS0 482 aa1.53□□□□□ -2.16
CEP290-204ENST00000547926 ZNF175Q9Y473 711 aa1.53□□□□□ -2.16
CEP290-204ENST00000547926 MTF2Q9Y483 593 aaPredicted RBP1.53□□□□□ -2.16
CEP290-204ENST00000547926 CHD8Q9HCK8 2581 aa1.52□□□□□ -2.17
CEP290-204ENST00000547926 NPIPA5A0A0B4J1W7 369 aa1.52□□□□□ -2.17
CEP290-204ENST00000547926 A0A0J9YVX5 310 aa1.52□□□□□ -2.17
CEP290-204ENST00000547926 CCDC69A6NI79 296 aa1.52□□□□□ -2.17
CEP290-204ENST00000547926 NPIPA5E9PKD4 350 aa1.52□□□□□ -2.17
CEP290-204ENST00000547926 LATO43561 262 aa1.52□□□□□ -2.17
CEP290-204ENST00000547926 LRP3O75074 770 aa1.52□□□□□ -2.17
CEP290-204ENST00000547926 NOL4O94818 638 aa1.52□□□□□ -2.17
CEP290-204ENST00000547926 ACTL6AO96019 429 aa1.52□□□□□ -2.17
CEP290-204ENST00000547926 CYP11B1P15538 503 aa1.52□□□□□ -2.17
CEP290-204ENST00000547926 NSFP46459 744 aaKnown RBP1.52□□□□□ -2.17
CEP290-204ENST00000547926 P2RY4P51582 365 aa1.52□□□□□ -2.17
CEP290-204ENST00000547926 GNB2P62879 340 aa1.52□□□□□ -2.17
CEP290-204ENST00000547926 SMC1AQ14683 1233 aaKnown RBP1.52□□□□□ -2.17
CEP290-204ENST00000547926 SHROOM1Q2M3G4 852 aaPredicted RBP1.52□□□□□ -2.17
CEP290-204ENST00000547926 DCAF4L1Q3SXM0 396 aa1.52□□□□□ -2.17
CEP290-204ENST00000547926 GLYR1Q49A26 553 aaPredicted RBP1.52□□□□□ -2.17
CEP290-204ENST00000547926 SBK1Q52WX2 424 aa1.52□□□□□ -2.17
CEP290-204ENST00000547926 CMPK2Q5EBM0 449 aa1.52□□□□□ -2.17
CEP290-204ENST00000547926 IYDQ6PHW0 289 aa1.52□□□□□ -2.17
CEP290-204ENST00000547926 CHCHD4Q8N4Q1 142 aa1.52□□□□□ -2.17
CEP290-204ENST00000547926 TMCO5AQ8N6Q1 288 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms