RNA–Protein interactions for RNA: ENST00000546489.5

CDK4-203, Transcript of cyclin dependent kinase 4, humanhuman

TSL 5

Gene CDK4, Length 776 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-203ENST00000546489 TTC36A6NLP5 189 aa12.1□□□□□ -0.47
CDK4-203ENST00000546489 CFLARO15519 480 aa12.1□□□□□ -0.47
CDK4-203ENST00000546489 SUV39H1O43463 412 aa12.1□□□□□ -0.47
CDK4-203ENST00000546489 FBXO45P0C2W1 286 aa12.1□□□□□ -0.47
CDK4-203ENST00000546489 CD46P15529 392 aa12.1□□□□□ -0.47
CDK4-203ENST00000546489 NAGAP17050 411 aa12.1□□□□□ -0.47
CDK4-203ENST00000546489 MAP3K8P41279 467 aa12.1□□□□□ -0.47
CDK4-203ENST00000546489 CCT3P49368 545 aaKnown RBP12.1□□□□□ -0.47
CDK4-203ENST00000546489 POLR2JP52435 117 aaKnown RBP12.1□□□□□ -0.47
CDK4-203ENST00000546489 SEC24CP53992 1094 aa12.1□□□□□ -0.47
CDK4-203ENST00000546489 NRG3P56975 720 aa12.1□□□□□ -0.47
CDK4-203ENST00000546489 NTRK2Q16620 822 aa12.1□□□□□ -0.47
CDK4-203ENST00000546489 ZNF791Q3KP31 576 aaPredicted RBP12.1□□□□□ -0.47
CDK4-203ENST00000546489 ZNF766Q5HY98 468 aa12.1□□□□□ -0.47
CDK4-203ENST00000546489 EXOSC6Q5RKV6 272 aaKnown RBP12.1□□□□□ -0.47
CDK4-203ENST00000546489 SLC25A25Q6KCM7 469 aa12.1□□□□□ -0.47
CDK4-203ENST00000546489 RPUSD3Q6P087 351 aaKnown RBP12.1□□□□□ -0.47
CDK4-203ENST00000546489 ZCCHC12Q6PEW1 402 aa12.1□□□□□ -0.47
CDK4-203ENST00000546489 IL20RBQ6UXL0 311 aa12.1□□□□□ -0.47
CDK4-203ENST00000546489 NPSR1Q6W5P4 371 aa12.1□□□□□ -0.47
CDK4-203ENST00000546489 MSANTD1Q6ZTZ1 278 aa12.1□□□□□ -0.47
CDK4-203ENST00000546489 ANKRD46Q86W74 232 aa12.1□□□□□ -0.47
CDK4-203ENST00000546489 FUNDC1Q8IVP5 155 aa12.1□□□□□ -0.47
CDK4-203ENST00000546489 GOLM1Q8NBJ4 401 aa12.1□□□□□ -0.47
CDK4-203ENST00000546489 GOT1L1Q8NHS2 421 aaPredicted RBP12.1□□□□□ -0.47
CDK4-203ENST00000546489 SPACA9Q96E40 222 aaPredicted RBP12.1□□□□□ -0.47
CDK4-203ENST00000546489 SGCZQ96LD1 299 aa12.1□□□□□ -0.47
CDK4-203ENST00000546489 OR52E6Q96RD3 313 aa12.1□□□□□ -0.47
CDK4-203ENST00000546489 ZCCHC3Q9NUD5 404 aaKnown RBP12.1□□□□□ -0.47
CDK4-203ENST00000546489 PCDHGB4Q9UN71 923 aa12.1□□□□□ -0.47
CDK4-203ENST00000546489 PCDHGA10Q9Y5H3 936 aa12.1□□□□□ -0.47
CDK4-203ENST00000546489 SNX8Q9Y5X2 465 aa12.1□□□□□ -0.47
CDK4-203ENST00000546489 NPFFR2Q9Y5X5 522 aa12.1□□□□□ -0.47
CDK4-203ENST00000546489 NINQ8N4C6 2090 aa12.1□□□□□ -0.47
CDK4-203ENST00000546489 CAPN14A8MX76 684 aa12.09□□□□□ -0.47
CDK4-203ENST00000546489 B8ZZF3 427 aa12.09□□□□□ -0.47
CDK4-203ENST00000546489 SLC25A12O75746 678 aa12.09□□□□□ -0.47
CDK4-203ENST00000546489 SP1P08047 785 aa12.09□□□□□ -0.47
CDK4-203ENST00000546489 ABCB1P08183 1280 aaPredicted RBP12.09□□□□□ -0.47
CDK4-203ENST00000546489 NCF2P19878 526 aaPredicted RBP12.09□□□□□ -0.47
CDK4-203ENST00000546489 ABCD3P28288 659 aa12.09□□□□□ -0.47
CDK4-203ENST00000546489 TMED10P49755 219 aaKnown RBP12.09□□□□□ -0.47
CDK4-203ENST00000546489 PRKAG1P54619 331 aa12.09□□□□□ -0.47
CDK4-203ENST00000546489 CORO7P57737 925 aa12.09□□□□□ -0.47
CDK4-203ENST00000546489 GNGT1P63211 74 aa12.09□□□□□ -0.47
CDK4-203ENST00000546489 ZNF155Q12901 538 aaPredicted RBP12.09□□□□□ -0.47
CDK4-203ENST00000546489 RCAN2Q14206 197 aa12.09□□□□□ -0.47
CDK4-203ENST00000546489 NNATQ16517 81 aa12.09□□□□□ -0.47
CDK4-203ENST00000546489 MAPKAPK3Q16644 382 aa12.09□□□□□ -0.47
CDK4-203ENST00000546489 MFSD12Q6NUT3 480 aa12.09□□□□□ -0.47
CDK4-203ENST00000546489 BLOC1S3Q6QNY0 202 aa12.09□□□□□ -0.47
CDK4-203ENST00000546489 RTL4Q6ZR62 310 aa12.09□□□□□ -0.47
CDK4-203ENST00000546489 MDGA2Q7Z553 956 aa12.09□□□□□ -0.47
CDK4-203ENST00000546489 CDRT4Q8N9R6 151 aa12.09□□□□□ -0.47
CDK4-203ENST00000546489 TMEM178AQ8NBL3 297 aa12.09□□□□□ -0.47
CDK4-203ENST00000546489 OR56A1Q8NGH5 318 aa12.09□□□□□ -0.47
CDK4-203ENST00000546489 OR4A15Q8NGL6 344 aa12.09□□□□□ -0.47
CDK4-203ENST00000546489 C10orf82Q8WW14 230 aa12.09□□□□□ -0.47
CDK4-203ENST00000546489 TMEM125Q96AQ2 219 aa12.09□□□□□ -0.47
CDK4-203ENST00000546489 C5orf34Q96MH7 638 aa12.09□□□□□ -0.47
CDK4-203ENST00000546489 RABEP2Q9H5N1 569 aa12.09□□□□□ -0.47
CDK4-203ENST00000546489 SH2D2AQ9NP31 389 aa12.09□□□□□ -0.47
CDK4-203ENST00000546489 TIMMDC1Q9NPL8 285 aa12.09□□□□□ -0.47
CDK4-203ENST00000546489 MRGBPQ9NV56 204 aa12.09□□□□□ -0.47
CDK4-203ENST00000546489 GPATCH2Q9NW75 528 aa12.09□□□□□ -0.47
CDK4-203ENST00000546489 CCDC167Q9P0B6 97 aa12.09□□□□□ -0.47
CDK4-203ENST00000546489 MAP10Q9P2G4 905 aa12.09□□□□□ -0.47
CDK4-203ENST00000546489 KALRNO60229 2985 aa12.09□□□□□ -0.47
CDK4-203ENST00000546489 SHANK1Q9Y566 2161 aa12.08□□□□□ -0.48
CDK4-203ENST00000546489 GMNCA6NCL1 334 aa12.08□□□□□ -0.48
CDK4-203ENST00000546489 NME2P1O60361 137 aa12.08□□□□□ -0.48
CDK4-203ENST00000546489 PPM1BO75688 479 aa12.08□□□□□ -0.48
CDK4-203ENST00000546489 NKX2-2O95096 273 aa12.08□□□□□ -0.48
CDK4-203ENST00000546489 CPSF4O95639 269 aaKnown RBP12.08□□□□□ -0.48
CDK4-203ENST00000546489 HMGN2P05204 90 aaKnown RBP12.08□□□□□ -0.48
CDK4-203ENST00000546489 NME2P22392 152 aa12.08□□□□□ -0.48
CDK4-203ENST00000546489 UQCRC2P22695 453 aa12.08□□□□□ -0.48
CDK4-203ENST00000546489 PRIM2P49643 509 aa12.08□□□□□ -0.48
CDK4-203ENST00000546489 KCNK10P57789 538 aa12.08□□□□□ -0.48
CDK4-203ENST00000546489 SF3A3Q12874 501 aaKnown RBP eCLIP12.08□□□□□ -0.485e-9■□□□□ 11.1
CDK4-203ENST00000546489 ZNHIT3Q15649 155 aaPredicted RBP12.08□□□□□ -0.48
CDK4-203ENST00000546489 INAQ16352 499 aa12.08□□□□□ -0.48
CDK4-203ENST00000546489 SPDYE7PQ495Y7 208 aa12.08□□□□□ -0.48
CDK4-203ENST00000546489 VPS26BQ4G0F5 336 aa12.08□□□□□ -0.48
CDK4-203ENST00000546489 TIGD2Q4W5G0 525 aa12.08□□□□□ -0.48
CDK4-203ENST00000546489 COLEC12Q5KU26 742 aa12.08□□□□□ -0.48
CDK4-203ENST00000546489 BHLHB9Q6PI77 547 aa12.08□□□□□ -0.48
CDK4-203ENST00000546489 SZRD1Q7Z422 152 aa12.08□□□□□ -0.48
CDK4-203ENST00000546489 SLC34A3Q8N130 599 aa12.08□□□□□ -0.48
CDK4-203ENST00000546489 CPSF7Q8N684 471 aaKnown RBP12.08□□□□□ -0.48
CDK4-203ENST00000546489 PSD4Q8NDX1 1056 aa12.08□□□□□ -0.48
CDK4-203ENST00000546489 OMA1Q96E52 524 aa12.08□□□□□ -0.48
CDK4-203ENST00000546489 PANX1Q96RD7 426 aa12.08□□□□□ -0.48
CDK4-203ENST00000546489 HES7Q9BYE0 225 aa12.08□□□□□ -0.48
CDK4-203ENST00000546489 NSRP1Q9H0G5 558 aaKnown RBP12.08□□□□□ -0.48
CDK4-203ENST00000546489 Q9N2J8 555 aa12.08□□□□□ -0.48
CDK4-203ENST00000546489 SLC52A3Q9NQ40 469 aa12.08□□□□□ -0.48
CDK4-203ENST00000546489 EQTNQ9NQ60 294 aa12.08□□□□□ -0.48
CDK4-203ENST00000546489 SERHLQ9NQF3 203 aa12.08□□□□□ -0.48
CDK4-203ENST00000546489 GIN1Q9NXP7 522 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms