RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 ADRA1AP35348 466 aa4.38□□□□□ -1.71
PRKDC-208ENST00000536710 PTGFRP43088 359 aa4.38□□□□□ -1.71
PRKDC-208ENST00000536710 GSK3BP49841 420 aa4.38□□□□□ -1.71
PRKDC-208ENST00000536710 MFAP2P55001 183 aa4.38□□□□□ -1.71
PRKDC-208ENST00000536710 HAND2P61296 217 aa4.38□□□□□ -1.71
PRKDC-208ENST00000536710 MRPS6P82932 125 aaKnown RBP4.38□□□□□ -1.71
PRKDC-208ENST00000536710 OVGP1Q12889 678 aa4.38□□□□□ -1.71
PRKDC-208ENST00000536710 EIF2B1Q14232 305 aaKnown RBP4.38□□□□□ -1.71
PRKDC-208ENST00000536710 TRIP10Q15642 601 aa4.38□□□□□ -1.71
PRKDC-208ENST00000536710 USH1GQ495M9 461 aa4.38□□□□□ -1.71
PRKDC-208ENST00000536710 TAF3Q5VWG9 929 aa4.38□□□□□ -1.71
PRKDC-208ENST00000536710 SULT1C3Q6IMI6 304 aa4.38□□□□□ -1.71
PRKDC-208ENST00000536710 GALNT17Q6IS24 598 aa4.38□□□□□ -1.71
PRKDC-208ENST00000536710 ARMCX5Q6P1M9 558 aa4.38□□□□□ -1.71
PRKDC-208ENST00000536710 PNCKQ6P2M8 343 aa4.38□□□□□ -1.71
PRKDC-208ENST00000536710 PAQR6Q6TCH4 344 aa4.38□□□□□ -1.71
PRKDC-208ENST00000536710 ATRAIDQ6UW56 229 aa4.38□□□□□ -1.71
PRKDC-208ENST00000536710 ADAMTSL5Q6ZMM2 481 aa4.38□□□□□ -1.71
PRKDC-208ENST00000536710 STXBP4Q6ZWJ1 553 aa4.38□□□□□ -1.71
PRKDC-208ENST00000536710 HSCBQ8IWL3 235 aa4.38□□□□□ -1.71
PRKDC-208ENST00000536710 CENPLQ8N0S6 344 aaPredicted RBP4.38□□□□□ -1.71
PRKDC-208ENST00000536710 GCNT2Q8N0V5 402 aa4.38□□□□□ -1.71
PRKDC-208ENST00000536710 C4orf32Q8N8J7 132 aa4.38□□□□□ -1.71
PRKDC-208ENST00000536710 BEST4Q8NFU0 473 aa4.38□□□□□ -1.71
PRKDC-208ENST00000536710 DLX4Q92988 240 aaPredicted RBP4.38□□□□□ -1.71
PRKDC-208ENST00000536710 TADA1Q96BN2 335 aa4.38□□□□□ -1.71
PRKDC-208ENST00000536710 SLC25A36Q96CQ1 311 aa4.38□□□□□ -1.71
PRKDC-208ENST00000536710 ST6GALNAC5Q9BVH7 336 aa4.38□□□□□ -1.71
PRKDC-208ENST00000536710 TSPY26PQ9H489 355 aa4.38□□□□□ -1.71
PRKDC-208ENST00000536710 PALMDQ9NP74 551 aa4.38□□□□□ -1.71
PRKDC-208ENST00000536710 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.38□□□□□ -1.71
PRKDC-208ENST00000536710 DUS2Q9NX74 493 aaKnown RBP4.38□□□□□ -1.71
PRKDC-208ENST00000536710 TMOD2Q9NZR1 351 aa4.38□□□□□ -1.71
PRKDC-208ENST00000536710 KLRF1Q9NZS2 232 aa4.38□□□□□ -1.71
PRKDC-208ENST00000536710 SPATA2Q9UM82 520 aa4.38□□□□□ -1.71
PRKDC-208ENST00000536710 ATP6V0A2Q9Y487 856 aa4.38□□□□□ -1.71
PRKDC-208ENST00000536710 MFHAS1Q9Y4C4 1052 aa4.38□□□□□ -1.71
PRKDC-208ENST00000536710 RNF222A6NCQ9 220 aa4.37□□□□□ -1.71
PRKDC-208ENST00000536710 TRABD2BA6NFA1 517 aa4.37□□□□□ -1.71
PRKDC-208ENST00000536710 EPM2AB3EWF7 344 aa4.37□□□□□ -1.71
PRKDC-208ENST00000536710 WASH3PC4AMC7 463 aa4.37□□□□□ -1.71
PRKDC-208ENST00000536710 IMPA2O14732 288 aa4.37□□□□□ -1.71
PRKDC-208ENST00000536710 CPLX1O14810 134 aa4.37□□□□□ -1.71
PRKDC-208ENST00000536710 ALOX15BO15296 676 aa4.37□□□□□ -1.71
PRKDC-208ENST00000536710 MT-ND1P03886 318 aa4.37□□□□□ -1.71
PRKDC-208ENST00000536710 KRT6BP04259 564 aa4.37□□□□□ -1.71
PRKDC-208ENST00000536710 ZNF883P0CG24 379 aa4.37□□□□□ -1.71
PRKDC-208ENST00000536710 THRBP10828 461 aa4.37□□□□□ -1.71
PRKDC-208ENST00000536710 DPP4P27487 766 aa4.37□□□□□ -1.71
PRKDC-208ENST00000536710 AXLP30530 894 aa4.37□□□□□ -1.71
PRKDC-208ENST00000536710 DLSTP36957 453 aa4.37□□□□□ -1.71
PRKDC-208ENST00000536710 ETV5P41161 510 aa4.37□□□□□ -1.71
PRKDC-208ENST00000536710 KRT6CP48668 564 aa4.37□□□□□ -1.71
PRKDC-208ENST00000536710 IL9RQ01113 521 aa4.37□□□□□ -1.71
PRKDC-208ENST00000536710 CD226Q15762 336 aa4.37□□□□□ -1.71
PRKDC-208ENST00000536710 C9orf66Q5T8R8 295 aa4.37□□□□□ -1.71
PRKDC-208ENST00000536710 FAM219BQ5XKK7 198 aa4.37□□□□□ -1.71
PRKDC-208ENST00000536710 ZNF562Q6V9R5 426 aa4.37□□□□□ -1.71
PRKDC-208ENST00000536710 WASH2PQ6VEQ5 465 aa4.37□□□□□ -1.71
PRKDC-208ENST00000536710 NET1Q7Z628 596 aaPredicted RBP4.37□□□□□ -1.71
PRKDC-208ENST00000536710 EFCAB13Q8IY85 973 aa4.37□□□□□ -1.71
PRKDC-208ENST00000536710 CCDC36Q8IYA8 594 aa4.37□□□□□ -1.71
PRKDC-208ENST00000536710 ZNF491Q8N8L2 437 aa4.37□□□□□ -1.71
PRKDC-208ENST00000536710 THRSPQ92748 146 aa4.37□□□□□ -1.71
PRKDC-208ENST00000536710 HPDLQ96IR7 371 aa4.37□□□□□ -1.71
PRKDC-208ENST00000536710 ELMO2Q96JJ3 720 aa4.37□□□□□ -1.71
PRKDC-208ENST00000536710 VSTM2LQ96N03 204 aa4.37□□□□□ -1.71
PRKDC-208ENST00000536710 VPS35Q96QK1 796 aa4.37□□□□□ -1.71
PRKDC-208ENST00000536710 FAM173AQ9BQD7 235 aa4.37□□□□□ -1.71
PRKDC-208ENST00000536710 TBCDQ9BTW9 1192 aa4.37□□□□□ -1.71
PRKDC-208ENST00000536710 TPPP3Q9BW30 176 aa4.37□□□□□ -1.71
PRKDC-208ENST00000536710 GSDMCQ9BYG8 508 aa4.37□□□□□ -1.71
PRKDC-208ENST00000536710 KRTAP9-8Q9BYQ0 159 aa4.37□□□□□ -1.71
PRKDC-208ENST00000536710 ADNPQ9H2P0 1102 aa4.37□□□□□ -1.71
PRKDC-208ENST00000536710 ABCC13Q9NSE7 274 aa4.37□□□□□ -1.71
PRKDC-208ENST00000536710 DCAF13Q9NV06 445 aaKnown RBP4.37□□□□□ -1.71
PRKDC-208ENST00000536710 LAMP5Q9UJQ1 280 aa4.37□□□□□ -1.71
PRKDC-208ENST00000536710 MYH15Q9Y2K3 1946 aa4.36□□□□□ -1.71
PRKDC-208ENST00000536710 A0A1B0GUL7 405 aa4.36□□□□□ -1.71
PRKDC-208ENST00000536710 MFSD2BA6NFX1 497 aa4.36□□□□□ -1.71
PRKDC-208ENST00000536710 NPIPA2E9PIF3 369 aa4.36□□□□□ -1.71
PRKDC-208ENST00000536710 C11orf98E9PRG8 122 aa4.36□□□□□ -1.71
PRKDC-208ENST00000536710 MAPK13O15264 365 aa4.36□□□□□ -1.71
PRKDC-208ENST00000536710 LRRTM2O43300 516 aa4.36□□□□□ -1.71
PRKDC-208ENST00000536710 OR4F21O95013 312 aa4.36□□□□□ -1.71
PRKDC-208ENST00000536710 PCCBP05166 539 aa4.36□□□□□ -1.71
PRKDC-208ENST00000536710 HCKP08631 526 aa4.36□□□□□ -1.71
PRKDC-208ENST00000536710 HSPA5P11021 654 aaKnown RBP4.36□□□□□ -1.71
PRKDC-208ENST00000536710 EPB41P11171 864 aaKnown RBP4.36□□□□□ -1.71
PRKDC-208ENST00000536710 OSTNP61366 133 aa4.36□□□□□ -1.71
PRKDC-208ENST00000536710 TRA2BP62995 288 aaKnown RBP4.36□□□□□ -1.71
PRKDC-208ENST00000536710 ZP4Q12836 540 aa4.36□□□□□ -1.71
PRKDC-208ENST00000536710 CRMP1Q14194 572 aa4.36□□□□□ -1.71
PRKDC-208ENST00000536710 C14orf28Q4W4Y0 310 aa4.36□□□□□ -1.71
PRKDC-208ENST00000536710 TMEM41BQ5BJD5 291 aa4.36□□□□□ -1.71
PRKDC-208ENST00000536710 SEL1L2Q5TEA6 688 aa4.36□□□□□ -1.71
PRKDC-208ENST00000536710 PRR5LQ6MZQ0 368 aa4.36□□□□□ -1.71
PRKDC-208ENST00000536710 LRRC8BQ6P9F7 803 aa4.36□□□□□ -1.71
PRKDC-208ENST00000536710 REG3GQ6UW15 175 aa4.36□□□□□ -1.71
PRKDC-208ENST00000536710 ZNF841Q6ZN19 808 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms