RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 ERN1O75460 977 aaKnown RBP10.18□□□□□ -0.78
CLSTN3-206ENST00000535668 TRAPPC6AO75865 159 aa10.18□□□□□ -0.78
CLSTN3-206ENST00000535668 HEXAP06865 529 aa10.18□□□□□ -0.78
CLSTN3-206ENST00000535668 RPS17P08708 135 aaKnown RBP10.18□□□□□ -0.78
CLSTN3-206ENST00000535668 INHBBP09529 407 aa10.18□□□□□ -0.78
CLSTN3-206ENST00000535668 CT45A8P0DMV1 189 aa10.18□□□□□ -0.78
CLSTN3-206ENST00000535668 CT45A9P0DMV2 189 aa10.18□□□□□ -0.78
CLSTN3-206ENST00000535668 GFAPP14136 432 aa10.18□□□□□ -0.78
CLSTN3-206ENST00000535668 GMPRP36959 345 aa10.18□□□□□ -0.78
CLSTN3-206ENST00000535668 MC3RP41968 323 aa10.18□□□□□ -0.78
CLSTN3-206ENST00000535668 GSTM5P46439 218 aa10.18□□□□□ -0.78
CLSTN3-206ENST00000535668 NEK2P51955 445 aa10.18□□□□□ -0.78
CLSTN3-206ENST00000535668 CLDN18P56856 261 aa10.18□□□□□ -0.78
CLSTN3-206ENST00000535668 FOXF2Q12947 444 aa10.18□□□□□ -0.78
CLSTN3-206ENST00000535668 SLMAPQ14BN4 828 aa10.18□□□□□ -0.78
CLSTN3-206ENST00000535668 GUSBP1Q15486 140 aa10.18□□□□□ -0.78
CLSTN3-206ENST00000535668 CT45A2Q5DJT8 189 aa10.18□□□□□ -0.78
CLSTN3-206ENST00000535668 WIPI1Q5MNZ9 446 aaPredicted RBP10.18□□□□□ -0.78
CLSTN3-206ENST00000535668 TMEM64Q6YI46 380 aa10.18□□□□□ -0.78
CLSTN3-206ENST00000535668 PLCZ1Q86YW0 608 aa10.18□□□□□ -0.78
CLSTN3-206ENST00000535668 MMP21Q8N119 569 aa10.18□□□□□ -0.78
CLSTN3-206ENST00000535668 CAVIN3Q969G5 261 aa10.18□□□□□ -0.78
CLSTN3-206ENST00000535668 PIGTQ969N2 578 aa10.18□□□□□ -0.78
CLSTN3-206ENST00000535668 TMCO6Q96DC7 493 aa10.18□□□□□ -0.78
CLSTN3-206ENST00000535668 COX4I2Q96KJ9 171 aa10.18□□□□□ -0.78
CLSTN3-206ENST00000535668 JSRP1Q96MG2 331 aaPredicted RBP10.18□□□□□ -0.78
CLSTN3-206ENST00000535668 TRIB1Q96RU8 372 aa10.18□□□□□ -0.78
CLSTN3-206ENST00000535668 NODALQ96S42 347 aa10.18□□□□□ -0.78
CLSTN3-206ENST00000535668 TUBA1CQ9BQE3 449 aa10.18□□□□□ -0.78
CLSTN3-206ENST00000535668 OSBPL11Q9BXB4 747 aa10.18□□□□□ -0.78
CLSTN3-206ENST00000535668 GSX1Q9H4S2 264 aaPredicted RBP10.18□□□□□ -0.78
CLSTN3-206ENST00000535668 NOL11Q9H8H0 719 aaKnown RBP10.18□□□□□ -0.78
CLSTN3-206ENST00000535668 ZDHHC18Q9NUE0 388 aa10.18□□□□□ -0.78
CLSTN3-206ENST00000535668 NMRK1Q9NWW6 199 aa10.18□□□□□ -0.78
CLSTN3-206ENST00000535668 GALNT8Q9NY28 637 aa10.18□□□□□ -0.78
CLSTN3-206ENST00000535668 TAS2R7Q9NYW3 318 aa10.18□□□□□ -0.78
CLSTN3-206ENST00000535668 EHD3Q9NZN3 535 aa10.18□□□□□ -0.78
CLSTN3-206ENST00000535668 PACSIN3Q9UKS6 424 aa10.18□□□□□ -0.78
CLSTN3-206ENST00000535668 UTP11Q9Y3A2 253 aaKnown RBP10.18□□□□□ -0.78
CLSTN3-206ENST00000535668 SH3D21A4FU49 640 aa10.17□□□□□ -0.78
CLSTN3-206ENST00000535668 ARHGEF9O43307 516 aa10.17□□□□□ -0.78
CLSTN3-206ENST00000535668 CTIFO43310 598 aaKnown RBP10.17□□□□□ -0.78
CLSTN3-206ENST00000535668 TSPAN2O60636 221 aa10.17□□□□□ -0.78
CLSTN3-206ENST00000535668 SLITRK5O94991 958 aa10.17□□□□□ -0.78
CLSTN3-206ENST00000535668 SIX3O95343 332 aaPredicted RBP10.17□□□□□ -0.78
CLSTN3-206ENST00000535668 KLK1P06870 262 aa10.17□□□□□ -0.78
CLSTN3-206ENST00000535668 DRD2P14416 443 aa10.17□□□□□ -0.78
CLSTN3-206ENST00000535668 SERPINB8P50452 374 aa10.17□□□□□ -0.78
CLSTN3-206ENST00000535668 MAPK12P53778 367 aa10.17□□□□□ -0.78
CLSTN3-206ENST00000535668 PNLIPRP2P54317 469 aa10.17□□□□□ -0.78
CLSTN3-206ENST00000535668 PLTPP55058 493 aa10.17□□□□□ -0.78
CLSTN3-206ENST00000535668 DIO3P55073 304 aa10.17□□□□□ -0.78
CLSTN3-206ENST00000535668 B3GALT5-AS1P59052 145 aa10.17□□□□□ -0.78
CLSTN3-206ENST00000535668 IRF9Q00978 393 aa10.17□□□□□ -0.78
CLSTN3-206ENST00000535668 LTBQ06643 244 aa10.17□□□□□ -0.78
CLSTN3-206ENST00000535668 SNTB1Q13884 538 aaKnown RBP10.17□□□□□ -0.78
CLSTN3-206ENST00000535668 FGFBP1Q14512 234 aa10.17□□□□□ -0.78
CLSTN3-206ENST00000535668 TSNAXIP1Q2TAA8 658 aa10.17□□□□□ -0.78
CLSTN3-206ENST00000535668 GLYR1Q49A26 553 aaPredicted RBP10.17□□□□□ -0.78
CLSTN3-206ENST00000535668 ZNF628Q5EBL2 1059 aa10.17□□□□□ -0.78
CLSTN3-206ENST00000535668 CCNYL2Q5T2Q4 361 aa10.17□□□□□ -0.78
CLSTN3-206ENST00000535668 MROH9Q5TGP6 573 aa10.17□□□□□ -0.78
CLSTN3-206ENST00000535668 OR2A2Q6IF42 318 aa10.17□□□□□ -0.78
CLSTN3-206ENST00000535668 AAGABQ6PD74 315 aa10.17□□□□□ -0.78
CLSTN3-206ENST00000535668 ANGPTL8Q6UXH0 198 aa10.17□□□□□ -0.78
CLSTN3-206ENST00000535668 COMMD6Q7Z4G1 85 aa10.17□□□□□ -0.78
CLSTN3-206ENST00000535668 MILR1Q7Z6M3 343 aa10.17□□□□□ -0.78
CLSTN3-206ENST00000535668 LCA5Q86VQ0 697 aa10.17□□□□□ -0.78
CLSTN3-206ENST00000535668 TRIM42Q8IWZ5 723 aa10.17□□□□□ -0.78
CLSTN3-206ENST00000535668 LINC01560Q8TB33 94 aa10.17□□□□□ -0.78
CLSTN3-206ENST00000535668 EXT2Q93063 718 aa10.17□□□□□ -0.78
CLSTN3-206ENST00000535668 OMA1Q96E52 524 aa10.17□□□□□ -0.78
CLSTN3-206ENST00000535668 CNRIP1Q96F85 164 aaPredicted RBP10.17□□□□□ -0.78
CLSTN3-206ENST00000535668 VSTM2LQ96N03 204 aa10.17□□□□□ -0.78
CLSTN3-206ENST00000535668 RBM24Q9BX46 236 aaKnown RBP10.17□□□□□ -0.78
CLSTN3-206ENST00000535668 MRPL1Q9BYD6 325 aaKnown RBP10.17□□□□□ -0.78
CLSTN3-206ENST00000535668 STMN4Q9H169 189 aaPredicted RBP10.17□□□□□ -0.78
CLSTN3-206ENST00000535668 METTL7AQ9H8H3 244 aa10.17□□□□□ -0.78
CLSTN3-206ENST00000535668 ELOVL5Q9NYP7 299 aa10.17□□□□□ -0.78
CLSTN3-206ENST00000535668 NDRG3Q9UGV2 375 aa10.17□□□□□ -0.78
CLSTN3-206ENST00000535668 ZNF225Q9UK10 706 aa10.17□□□□□ -0.78
CLSTN3-206ENST00000535668 CAMK2AQ9UQM7 478 aa10.17□□□□□ -0.78
CLSTN3-206ENST00000535668 RAI1Q7Z5J4 1906 aaPredicted RBP10.16□□□□□ -0.78
CLSTN3-206ENST00000535668 IGLV3-32A0A0A0MS00 114 aa10.16□□□□□ -0.78
CLSTN3-206ENST00000535668 A0A1W2PNV4 684 aa10.16□□□□□ -0.78
CLSTN3-206ENST00000535668 PRAMEF25A6NGN4 478 aa10.16□□□□□ -0.78
CLSTN3-206ENST00000535668 LRRC14BA6NHZ5 514 aa10.16□□□□□ -0.78
CLSTN3-206ENST00000535668 DEFB108AA8MXU0 73 aa10.16□□□□□ -0.78
CLSTN3-206ENST00000535668 DIAPH2O60879 1101 aa10.16□□□□□ -0.78
CLSTN3-206ENST00000535668 TNFRSF21O75509 655 aa10.16□□□□□ -0.78
CLSTN3-206ENST00000535668 OTCP00480 354 aa10.16□□□□□ -0.78
CLSTN3-206ENST00000535668 CGAP01215 116 aa10.16□□□□□ -0.78
CLSTN3-206ENST00000535668 CD8BP10966 210 aa10.16□□□□□ -0.78
CLSTN3-206ENST00000535668 KRT15P19012 456 aa10.16□□□□□ -0.78
CLSTN3-206ENST00000535668 IL11P20809 199 aa10.16□□□□□ -0.78
CLSTN3-206ENST00000535668 CNTFP26441 200 aa10.16□□□□□ -0.78
CLSTN3-206ENST00000535668 TYK2P29597 1187 aa10.16□□□□□ -0.78
CLSTN3-206ENST00000535668 CCNG1P51959 295 aa10.16□□□□□ -0.78
CLSTN3-206ENST00000535668 WNT3P56703 355 aa10.16□□□□□ -0.78
CLSTN3-206ENST00000535668 MRPS22P82650 360 aaKnown RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms