RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 BIKQ13323 160 aa7.38□□□□□ -1.23
CLIP1-206ENST00000535290 SNTA1Q13424 505 aa7.38□□□□□ -1.23
CLIP1-206ENST00000535290 SNX1Q13596 522 aa7.38□□□□□ -1.23
CLIP1-206ENST00000535290 RBM20Q5T481 1227 aaKnown RBP7.38□□□□□ -1.23
CLIP1-206ENST00000535290 AGAP6Q5VW22 663 aa7.38□□□□□ -1.23
CLIP1-206ENST00000535290 NUP54Q7Z3B4 507 aa7.38□□□□□ -1.23
CLIP1-206ENST00000535290 KRT78Q8N1N4 520 aa7.38□□□□□ -1.23
CLIP1-206ENST00000535290 ZNF615Q8N8J6 731 aa7.38□□□□□ -1.23
CLIP1-206ENST00000535290 CCDC89Q8N998 374 aa7.38□□□□□ -1.23
CLIP1-206ENST00000535290 C7orf57Q8NEG2 295 aa7.38□□□□□ -1.23
CLIP1-206ENST00000535290 OR6K3Q8NGY3 331 aa7.38□□□□□ -1.23
CLIP1-206ENST00000535290 PIWIL2Q8TC59 973 aaKnown RBP7.38□□□□□ -1.23
CLIP1-206ENST00000535290 C1orf54Q8WWF1 131 aa7.38□□□□□ -1.23
CLIP1-206ENST00000535290 KAT2AQ92830 837 aa7.38□□□□□ -1.23
CLIP1-206ENST00000535290 TANKQ92844 425 aa7.38□□□□□ -1.23
CLIP1-206ENST00000535290 ZNF669Q96BR6 464 aaPredicted RBP7.38□□□□□ -1.23
CLIP1-206ENST00000535290 VPS39Q96JC1 886 aa7.38□□□□□ -1.23
CLIP1-206ENST00000535290 TBCDQ9BTW9 1192 aa7.38□□□□□ -1.23
CLIP1-206ENST00000535290 BHLHE41Q9C0J9 482 aaPredicted RBP7.38□□□□□ -1.23
CLIP1-206ENST00000535290 ROGDIQ9GZN7 287 aa7.38□□□□□ -1.23
CLIP1-206ENST00000535290 NT5DC2Q9H857 520 aa7.38□□□□□ -1.23
CLIP1-206ENST00000535290 FOLH1BQ9HBA9 442 aa7.38□□□□□ -1.23
CLIP1-206ENST00000535290 DNAJC11Q9NVH1 559 aa7.38□□□□□ -1.23
CLIP1-206ENST00000535290 FAIMQ9NVQ4 179 aa7.38□□□□□ -1.23
CLIP1-206ENST00000535290 TAS2R13Q9NYV9 303 aa7.38□□□□□ -1.23
CLIP1-206ENST00000535290 DKKL1Q9UK85 242 aa7.38□□□□□ -1.23
CLIP1-206ENST00000535290 EMC9Q9Y3B6 208 aa7.38□□□□□ -1.23
CLIP1-206ENST00000535290 VWFP04275 2813 aa7.37□□□□□ -1.23
CLIP1-206ENST00000535290 UQCRHLA0A096LP55 91 aa7.37□□□□□ -1.23
CLIP1-206ENST00000535290 A0A0A6YYJ9 748 aa7.37□□□□□ -1.23
CLIP1-206ENST00000535290 SYCE3A1L190 88 aa7.37□□□□□ -1.23
CLIP1-206ENST00000535290 GLOD5A6NK44 160 aa7.37□□□□□ -1.23
CLIP1-206ENST00000535290 SLCO1B7G3V0H7 640 aa7.37□□□□□ -1.23
CLIP1-206ENST00000535290 AP3B1O00203 1094 aa7.37□□□□□ -1.23
CLIP1-206ENST00000535290 SAP18O00422 153 aaKnown RBP7.37□□□□□ -1.23
CLIP1-206ENST00000535290 RGS9O75916 674 aaPredicted RBP7.37□□□□□ -1.23
CLIP1-206ENST00000535290 WDR47O94967 919 aa7.37□□□□□ -1.23
CLIP1-206ENST00000535290 NTN1O95631 604 aa7.37□□□□□ -1.23
CLIP1-206ENST00000535290 CT62P0C5K7 136 aa7.37□□□□□ -1.23
CLIP1-206ENST00000535290 NAGAP17050 411 aa7.37□□□□□ -1.23
CLIP1-206ENST00000535290 IL11P20809 199 aa7.37□□□□□ -1.23
CLIP1-206ENST00000535290 GPX3P22352 226 aa7.37□□□□□ -1.23
CLIP1-206ENST00000535290 GABRB3P28472 473 aa7.37□□□□□ -1.23
CLIP1-206ENST00000535290 HPDP32754 393 aaPredicted RBP7.37□□□□□ -1.23
CLIP1-206ENST00000535290 TTKP33981 857 aa7.37□□□□□ -1.23
CLIP1-206ENST00000535290 CDH11P55287 796 aa7.37□□□□□ -1.23
CLIP1-206ENST00000535290 HNRNPH2P55795 449 aaKnown RBP7.37□□□□□ -1.23
CLIP1-206ENST00000535290 EEFSECP57772 596 aaKnown RBP7.37□□□□□ -1.23
CLIP1-206ENST00000535290 IL2P60568 153 aa7.37□□□□□ -1.23
CLIP1-206ENST00000535290 IRF9Q00978 393 aa7.37□□□□□ -1.23
CLIP1-206ENST00000535290 SLAMF1Q13291 335 aa7.37□□□□□ -1.23
CLIP1-206ENST00000535290 PPP1R3AQ16821 1122 aa7.37□□□□□ -1.23
CLIP1-206ENST00000535290 AP5B1Q2VPB7 878 aa7.37□□□□□ -1.23
CLIP1-206ENST00000535290 AWAT1Q58HT5 328 aa7.37□□□□□ -1.23
CLIP1-206ENST00000535290 FIGNL1Q6PIW4 674 aa7.37□□□□□ -1.23
CLIP1-206ENST00000535290 TREML4Q6UXN2 200 aa7.37□□□□□ -1.23
CLIP1-206ENST00000535290 BEND4Q6ZU67 534 aa7.37□□□□□ -1.23
CLIP1-206ENST00000535290 LRRC57Q8N9N7 239 aa7.37□□□□□ -1.23
CLIP1-206ENST00000535290 SNX31Q8N9S9 440 aa7.37□□□□□ -1.23
CLIP1-206ENST00000535290 STEAP2Q8NFT2 490 aa7.37□□□□□ -1.23
CLIP1-206ENST00000535290 OR5M1Q8NGP8 315 aa7.37□□□□□ -1.23
CLIP1-206ENST00000535290 OMA1Q96E52 524 aa7.37□□□□□ -1.23
CLIP1-206ENST00000535290 PELOQ9BRX2 385 aaKnown RBP7.37□□□□□ -1.23
CLIP1-206ENST00000535290 TSGA10Q9BZW7 698 aa7.37□□□□□ -1.23
CLIP1-206ENST00000535290 OR10A5Q9H207 317 aa7.37□□□□□ -1.23
CLIP1-206ENST00000535290 CXorf21Q9HAI6 301 aa7.37□□□□□ -1.23
CLIP1-206ENST00000535290 NGBQ9NPG2 151 aa7.37□□□□□ -1.23
CLIP1-206ENST00000535290 CBLN4Q9NTU7 201 aa7.37□□□□□ -1.23
CLIP1-206ENST00000535290 PACSIN2Q9UNF0 486 aaPredicted RBP7.37□□□□□ -1.23
CLIP1-206ENST00000535290 MRPS18CQ9Y3D5 142 aaKnown RBP7.37□□□□□ -1.23
CLIP1-206ENST00000535290 ZNF337Q9Y3M9 751 aa7.37□□□□□ -1.23
CLIP1-206ENST00000535290 PCDHGB1Q9Y5G3 927 aa7.37□□□□□ -1.23
CLIP1-206ENST00000535290 EFCAB8A8MWE9 144 aa7.36□□□□□ -1.23
CLIP1-206ENST00000535290 E7EQL1 145 aa7.36□□□□□ -1.23
CLIP1-206ENST00000535290 MFAP3LO75121 409 aa7.36□□□□□ -1.23
CLIP1-206ENST00000535290 GCM2O75603 506 aaPredicted RBP7.36□□□□□ -1.23
CLIP1-206ENST00000535290 ALDOAP04075 364 aaKnown RBP7.36□□□□□ -1.23
CLIP1-206ENST00000535290 ENO2P09104 434 aaPredicted RBP7.36□□□□□ -1.23
CLIP1-206ENST00000535290 CSF3P09919 207 aa7.36□□□□□ -1.23
CLIP1-206ENST00000535290 SLC35E2BP0CK96 405 aa7.36□□□□□ -1.23
CLIP1-206ENST00000535290 SLC35E2P0CK97 266 aa7.36□□□□□ -1.23
CLIP1-206ENST00000535290 CD22P20273 847 aa7.36□□□□□ -1.23
CLIP1-206ENST00000535290 GALNSP34059 522 aa7.36□□□□□ -1.23
CLIP1-206ENST00000535290 SSR2P43308 183 aa7.36□□□□□ -1.23
CLIP1-206ENST00000535290 NR4A2P43354 598 aa7.36□□□□□ -1.23
CLIP1-206ENST00000535290 EFNA4P52798 201 aa7.36□□□□□ -1.23
CLIP1-206ENST00000535290 TERF1P54274 439 aa7.36□□□□□ -1.23
CLIP1-206ENST00000535290 CTBP2P56545 445 aa7.36□□□□□ -1.23
CLIP1-206ENST00000535290 TNFRSF17Q02223 184 aa7.36□□□□□ -1.23
CLIP1-206ENST00000535290 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.36□□□□□ -1.23
CLIP1-206ENST00000535290 HSP90AA5PQ58FG0 334 aa7.36□□□□□ -1.23
CLIP1-206ENST00000535290 OXLD1Q5BKU9 147 aa7.36□□□□□ -1.23
CLIP1-206ENST00000535290 GPR180Q86V85 440 aa7.36□□□□□ -1.23
CLIP1-206ENST00000535290 LRRC17Q8N6Y2 441 aa7.36□□□□□ -1.23
CLIP1-206ENST00000535290 SRFBP1Q8NEF9 429 aaKnown RBP7.36□□□□□ -1.23
CLIP1-206ENST00000535290 C17orf47Q8NEP4 570 aa7.36□□□□□ -1.23
CLIP1-206ENST00000535290 FAM216AQ8WUB2 273 aa7.36□□□□□ -1.23
CLIP1-206ENST00000535290 HSD17B8Q92506 261 aa7.36□□□□□ -1.23
CLIP1-206ENST00000535290 ANKRD7Q92527 254 aa7.36□□□□□ -1.23
CLIP1-206ENST00000535290 GMPPAQ96IJ6 420 aaPredicted RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms