RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 ACTR1BP42025 376 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 CCR9P51686 369 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 ERVFC1-1P60608 527 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 SNAP25P60880 206 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 ACTR1AP61163 376 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 YWHAZP63104 245 aaKnown RBP3.98□□□□□ -1.77
ITGB1-219ENST00000534049 SLC3A1Q07837 685 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 MGAT3Q09327 533 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 ILF3Q12906 894 aaKnown RBP eCLIP3.98□□□□□ -1.77
ITGB1-219ENST00000534049 GAGE1Q13065 139 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 GAGE4Q13068 117 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 SLC12A1Q13621 1099 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 EFR3AQ14156 821 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 KCNJ11Q14654 390 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 NECTIN1Q15223 517 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 TRIP10Q15642 601 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 PSMD5Q16401 504 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 DGUOKQ16854 277 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 AP5B1Q2VPB7 878 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 CDNFQ49AH0 187 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 KLHL26Q53HC5 615 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 CLLU1Q5K131 121 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 CDKL4Q5MAI5 379 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 DNLZQ5SXM8 178 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 ATAD3CQ5T2N8 411 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 LIPNQ5VXI9 398 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 SLC25A24Q6NUK1 477 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 TMEM81Q6P7N7 255 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 SLC36A4Q6YBV0 504 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 DCXRQ7Z4W1 244 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 R3HCC1LQ7Z5L2 792 aaKnown RBP3.98□□□□□ -1.77
ITGB1-219ENST00000534049 DPPA2Q7Z7J5 298 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 AACSQ86V21 672 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 SLC22A16Q86VW1 577 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 ANKRD46Q86W74 232 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 GID4Q8IVV7 300 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 PHC2Q8IXK0 858 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 TCTE3Q8IZS6 198 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 EID3Q8N140 333 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 THEM5Q8N1Q8 247 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 PARP8Q8N3A8 854 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 PACRGLQ8N7B6 248 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 TDRD5Q8NAT2 981 aaKnown RBP3.98□□□□□ -1.77
ITGB1-219ENST00000534049 CAMKVQ8NCB2 501 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 SETD9Q8NE22 299 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 OR9A1PQ8NGU1 263 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 OR10T2Q8NGX3 314 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 OR6X1Q8NH79 312 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 SETD6Q8TBK2 473 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 TMEM170AQ8WVE7 144 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 TNFRSF14Q92956 283 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 TMEM143Q96AN5 459 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 AP2M1Q96CW1 435 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 CMTM5Q96DZ9 223 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 RNF145Q96MT1 663 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 PYM1Q9BRP8 204 aaKnown RBP3.98□□□□□ -1.77
ITGB1-219ENST00000534049 C2orf88Q9BSF0 95 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 MED18Q9BUE0 208 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 TSSK1BQ9BXA7 367 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 MRPL37Q9BZE1 423 aaKnown RBP3.98□□□□□ -1.77
ITGB1-219ENST00000534049 NPFFR1Q9GZQ6 430 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 SHARPINQ9H0F6 387 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 WWP1Q9H0M0 922 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 HDHD2Q9H0R4 259 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 NEUROG2Q9H2A3 272 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 CHODLQ9H9P2 273 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 CYP3A43Q9HB55 503 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 CTPS2Q9NRF8 586 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 MCUBQ9NWR8 336 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 IMPAD1Q9NX62 359 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 ELOVL2Q9NXB9 296 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 DPP3Q9NY33 737 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 TREM2Q9NZC2 230 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 LGALS13Q9UHV8 139 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 KLHL21Q9UJP4 597 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 MGAT4AQ9UM21 535 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 SLC22A14Q9Y267 594 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 KLHL20Q9Y2M5 609 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.98□□□□□ -1.77
ITGB1-219ENST00000534049 NUBP2Q9Y5Y2 271 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 A3GALT2U3KPV4 340 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 CKAP5Q14008 2032 aa3.98□□□□□ -1.77
ITGB1-219ENST00000534049 PFASO15067 1338 aa3.97□□□□□ -1.77
ITGB1-219ENST00000534049 SCN9AQ15858 1988 aa3.97□□□□□ -1.77
ITGB1-219ENST00000534049 IGLV5-37A0A075B6J1 123 aa3.97□□□□□ -1.77
ITGB1-219ENST00000534049 IGLV5-52A0A0A0MRZ9 124 aa3.97□□□□□ -1.77
ITGB1-219ENST00000534049 A0A0B4J293 547 aa3.97□□□□□ -1.77
ITGB1-219ENST00000534049 PNMA8CA0A1B0GUJ8 204 aa3.97□□□□□ -1.77
ITGB1-219ENST00000534049 GNG14A0A1W2PPG7 69 aa3.97□□□□□ -1.77
ITGB1-219ENST00000534049 KRT87PA6NCN2 255 aa3.97□□□□□ -1.77
ITGB1-219ENST00000534049 TRABD2BA6NFA1 517 aa3.97□□□□□ -1.77
ITGB1-219ENST00000534049 YDJCA8MPS7 323 aa3.97□□□□□ -1.77
ITGB1-219ENST00000534049 J3QRK9 145 aa3.97□□□□□ -1.77
ITGB1-219ENST00000534049 SULT1C2O00338 296 aa3.97□□□□□ -1.77
ITGB1-219ENST00000534049 SH2B2O14492 632 aaPredicted RBP3.97□□□□□ -1.77
ITGB1-219ENST00000534049 STX16O14662 325 aa3.97□□□□□ -1.77
ITGB1-219ENST00000534049 ZNF197O14709 1029 aa3.97□□□□□ -1.77
ITGB1-219ENST00000534049 PGRMC2O15173 223 aa3.97□□□□□ -1.77
ITGB1-219ENST00000534049 NUDT21O43809 227 aaKnown RBP3.97□□□□□ -1.77
ITGB1-219ENST00000534049 FAM189A1O60320 539 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms