RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 HOXC12P31275 282 aa16.74■□□□□ 0.27
SSSCA1-206ENST00000531405 GCKP35557 465 aa16.74■□□□□ 0.27
SSSCA1-206ENST00000531405 CPA2P48052 419 aa16.74■□□□□ 0.27
SSSCA1-206ENST00000531405 MRPS35P82673 323 aaKnown RBP16.74■□□□□ 0.27
SSSCA1-206ENST00000531405 SLC7A5Q01650 507 aa16.74■□□□□ 0.27
SSSCA1-206ENST00000531405 GALNT1Q10472 559 aaPredicted RBP16.74■□□□□ 0.27
SSSCA1-206ENST00000531405 MILR1Q7Z6M3 343 aa16.74■□□□□ 0.27
SSSCA1-206ENST00000531405 KRTAP1-3Q8IUG1 177 aa16.74■□□□□ 0.27
SSSCA1-206ENST00000531405 TM4SF18Q96CE8 201 aa16.74■□□□□ 0.27
SSSCA1-206ENST00000531405 SFXN3Q9BWM7 321 aa16.74■□□□□ 0.27
SSSCA1-206ENST00000531405 OR2B2Q9GZK3 357 aa16.74■□□□□ 0.27
SSSCA1-206ENST00000531405 ELOVL6Q9H5J4 265 aa16.74■□□□□ 0.27
SSSCA1-206ENST00000531405 ANKRA2Q9H9E1 313 aa16.74■□□□□ 0.27
SSSCA1-206ENST00000531405 XPR1Q9UBH6 696 aa16.74■□□□□ 0.27
SSSCA1-206ENST00000531405 EXO1Q9UQ84 846 aaKnown RBP16.74■□□□□ 0.27
SSSCA1-206ENST00000531405 CFL2Q9Y281 166 aa16.74■□□□□ 0.27
SSSCA1-206ENST00000531405 SH3D21A4FU49 640 aa16.73■□□□□ 0.27
SSSCA1-206ENST00000531405 STX16-NPEPL1H3BU86 382 aa16.73■□□□□ 0.27
SSSCA1-206ENST00000531405 PPP6CO00743 305 aa16.73■□□□□ 0.27
SSSCA1-206ENST00000531405 STX16O14662 325 aa16.73■□□□□ 0.27
SSSCA1-206ENST00000531405 ACOX3O15254 700 aa16.73■□□□□ 0.27
SSSCA1-206ENST00000531405 NME6O75414 186 aaPredicted RBP16.73■□□□□ 0.27
SSSCA1-206ENST00000531405 CBR3O75828 277 aa16.73■□□□□ 0.27
SSSCA1-206ENST00000531405 RCBTB2O95199 551 aa16.73■□□□□ 0.27
SSSCA1-206ENST00000531405 PCSK2P16519 638 aa16.73■□□□□ 0.27
SSSCA1-206ENST00000531405 TSPAN8P19075 237 aa16.73■□□□□ 0.27
SSSCA1-206ENST00000531405 CD53P19397 219 aa16.73■□□□□ 0.27
SSSCA1-206ENST00000531405 TCEA1P23193 301 aaKnown RBP16.73■□□□□ 0.27
SSSCA1-206ENST00000531405 ALDH9A1P49189 494 aa16.73■□□□□ 0.27
SSSCA1-206ENST00000531405 EMDP50402 254 aa16.73■□□□□ 0.27
SSSCA1-206ENST00000531405 LTBQ06643 244 aa16.73■□□□□ 0.27
SSSCA1-206ENST00000531405 SNTA1Q13424 505 aa16.73■□□□□ 0.27
SSSCA1-206ENST00000531405 GGTA1PQ4G0N0 100 aa16.73■□□□□ 0.27
SSSCA1-206ENST00000531405 ENPP6Q6UWR7 440 aa16.73■□□□□ 0.27
SSSCA1-206ENST00000531405 ADGRE4PQ86SQ3 457 aa16.73■□□□□ 0.27
SSSCA1-206ENST00000531405 IFNEQ86WN2 208 aa16.73■□□□□ 0.27
SSSCA1-206ENST00000531405 TRPC4APQ8TEL6 797 aa16.73■□□□□ 0.27
SSSCA1-206ENST00000531405 TMBIM1Q969X1 311 aa16.73■□□□□ 0.27
SSSCA1-206ENST00000531405 CTHRC1Q96CG8 243 aa16.73■□□□□ 0.27
SSSCA1-206ENST00000531405 CNRIP1Q96F85 164 aaPredicted RBP16.73■□□□□ 0.27
SSSCA1-206ENST00000531405 HBEGFQ99075 208 aa16.73■□□□□ 0.27
SSSCA1-206ENST00000531405 TM9SF2Q99805 663 aa16.73■□□□□ 0.27
SSSCA1-206ENST00000531405 CLCF1Q9UBD9 225 aa16.73■□□□□ 0.27
SSSCA1-206ENST00000531405 FBXL2Q9UKC9 423 aa16.73■□□□□ 0.27
SSSCA1-206ENST00000531405 FN1P02751 2386 aaKnown RBP16.73■□□□□ 0.27
SSSCA1-206ENST00000531405 GUCY1B2O75343 617 aa16.72■□□□□ 0.27
SSSCA1-206ENST00000531405 LHX2P50458 406 aa16.72■□□□□ 0.27
SSSCA1-206ENST00000531405 GFRA1P56159 465 aa16.72■□□□□ 0.27
SSSCA1-206ENST00000531405 OR5M10Q6IEU7 315 aa16.72■□□□□ 0.27
SSSCA1-206ENST00000531405 LETMD1Q6P1Q0 360 aa16.72■□□□□ 0.27
SSSCA1-206ENST00000531405 BIVMQ86UB2 503 aa16.72■□□□□ 0.27
SSSCA1-206ENST00000531405 C18orf12Q96KH6 178 aa16.72■□□□□ 0.27
SSSCA1-206ENST00000531405 ZNF681Q96N22 645 aa16.72■□□□□ 0.27
SSSCA1-206ENST00000531405 DACH2Q96NX9 599 aa16.72■□□□□ 0.27
SSSCA1-206ENST00000531405 NEUROD4Q9HD90 331 aa16.72■□□□□ 0.27
SSSCA1-206ENST00000531405 ZDHHC18Q9NUE0 388 aa16.72■□□□□ 0.27
SSSCA1-206ENST00000531405 TAS2R10Q9NYW0 307 aa16.72■□□□□ 0.27
SSSCA1-206ENST00000531405 NINJ2Q9NZG7 142 aa16.72■□□□□ 0.27
SSSCA1-206ENST00000531405 RAI1Q7Z5J4 1906 aaPredicted RBP16.71■□□□□ 0.27
SSSCA1-206ENST00000531405 FRG2CA6NGY1 282 aa16.71■□□□□ 0.27
SSSCA1-206ENST00000531405 PLOD2O00469 737 aa16.71■□□□□ 0.27
SSSCA1-206ENST00000531405 SMIM24O75264 130 aa16.71■□□□□ 0.27
SSSCA1-206ENST00000531405 REM1O75628 298 aa16.71■□□□□ 0.27
SSSCA1-206ENST00000531405 GOSR1O95249 250 aa16.71■□□□□ 0.27
SSSCA1-206ENST00000531405 RPS17P08708 135 aaKnown RBP16.71■□□□□ 0.27
SSSCA1-206ENST00000531405 RBP1P09455 135 aa16.71■□□□□ 0.27
SSSCA1-206ENST00000531405 DRD5P21918 477 aa16.71■□□□□ 0.27
SSSCA1-206ENST00000531405 CPOXP36551 454 aa16.71■□□□□ 0.27
SSSCA1-206ENST00000531405 MAGEA12P43365 314 aa16.71■□□□□ 0.27
SSSCA1-206ENST00000531405 PPICP45877 212 aa16.71■□□□□ 0.27
SSSCA1-206ENST00000531405 CDH13P55290 713 aa16.71■□□□□ 0.27
SSSCA1-206ENST00000531405 HMGCS1Q01581 520 aa16.71■□□□□ 0.27
SSSCA1-206ENST00000531405 C10orf62Q5T681 223 aaPredicted RBP16.71■□□□□ 0.27
SSSCA1-206ENST00000531405 PLCZ1Q86YW0 608 aa16.71■□□□□ 0.27
SSSCA1-206ENST00000531405 C1orf52Q8N6N3 182 aaKnown RBP16.71■□□□□ 0.27
SSSCA1-206ENST00000531405 SELENOMQ8WWX9 145 aa16.71■□□□□ 0.27
SSSCA1-206ENST00000531405 WNT2BQ93097 391 aa16.71■□□□□ 0.27
SSSCA1-206ENST00000531405 ISL2Q96A47 359 aa16.71■□□□□ 0.27
SSSCA1-206ENST00000531405 ZFP3Q96NJ6 502 aa16.71■□□□□ 0.27
SSSCA1-206ENST00000531405 COL21A1Q96P44 957 aa16.71■□□□□ 0.27
SSSCA1-206ENST00000531405 ACSS3Q9H6R3 686 aa16.71■□□□□ 0.27
SSSCA1-206ENST00000531405 HEY2Q9UBP5 337 aa16.71■□□□□ 0.27
SSSCA1-206ENST00000531405 TMCO1Q9UM00 188 aa16.71■□□□□ 0.27
SSSCA1-206ENST00000531405 JMJD1CQ15652 2540 aa16.71■□□□□ 0.27
SSSCA1-206ENST00000531405 OR6C70A6NIJ9 312 aa16.7■□□□□ 0.26
SSSCA1-206ENST00000531405 C17orf51A8MQB3 221 aa16.7■□□□□ 0.26
SSSCA1-206ENST00000531405 B4DXG7 233 aa16.7■□□□□ 0.26
SSSCA1-206ENST00000531405 TO15178 435 aa16.7■□□□□ 0.26
SSSCA1-206ENST00000531405 TGM6O95932 706 aa16.7■□□□□ 0.26
SSSCA1-206ENST00000531405 ADSLP30566 484 aaPredicted RBP16.7■□□□□ 0.26
SSSCA1-206ENST00000531405 CASQ1P31415 396 aa16.7■□□□□ 0.26
SSSCA1-206ENST00000531405 PHBP35232 272 aa16.7■□□□□ 0.26
SSSCA1-206ENST00000531405 CLDN18P56856 261 aa16.7■□□□□ 0.26
SSSCA1-206ENST00000531405 CORO7P57737 925 aa16.7■□□□□ 0.26
SSSCA1-206ENST00000531405 NKX6-1P78426 367 aaPredicted RBP16.7■□□□□ 0.26
SSSCA1-206ENST00000531405 TCHHL1Q5QJ38 904 aaPredicted RBP16.7■□□□□ 0.26
SSSCA1-206ENST00000531405 GRAMD2AQ8IUY3 354 aa16.7■□□□□ 0.26
SSSCA1-206ENST00000531405 C17orf53Q8N3J3 647 aaPredicted RBP16.7■□□□□ 0.26
SSSCA1-206ENST00000531405 ZNF483Q8TF39 744 aaPredicted RBP16.7■□□□□ 0.26
SSSCA1-206ENST00000531405 KAT2AQ92830 837 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms