RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 SCRG1O75711 98 aa14.2□□□□□ -0.14
USP47-207ENST00000527733 CPNE6O95741 557 aa14.2□□□□□ -0.14
USP47-207ENST00000527733 MAGEA8P43361 318 aa14.2□□□□□ -0.14
USP47-207ENST00000527733 IST1P53990 364 aa14.2□□□□□ -0.14
USP47-207ENST00000527733 EXOSC7Q15024 291 aaKnown RBP14.2□□□□□ -0.14
USP47-207ENST00000527733 ZNF619Q8N2I2 560 aa14.2□□□□□ -0.14
USP47-207ENST00000527733 OR8J1Q8NGP2 316 aa14.2□□□□□ -0.14
USP47-207ENST00000527733 PSMA8Q8TAA3 256 aa14.2□□□□□ -0.14
USP47-207ENST00000527733 HDAC2Q92769 488 aaKnown RBP14.2□□□□□ -0.14
USP47-207ENST00000527733 TM4SF18Q96CE8 201 aa14.2□□□□□ -0.14
USP47-207ENST00000527733 PCED1AQ9H1Q7 454 aa14.2□□□□□ -0.14
USP47-207ENST00000527733 SLC6A14Q9UN76 642 aa14.2□□□□□ -0.14
USP47-207ENST00000527733 RNF13O43567 381 aa14.2□□□□□ -0.14
USP47-207ENST00000527733 SLITRK5O94991 958 aa14.2□□□□□ -0.14
USP47-207ENST00000527733 SBK3P0C264 359 aa14.2□□□□□ -0.14
USP47-207ENST00000527733 GCGRP47871 477 aa14.2□□□□□ -0.14
USP47-207ENST00000527733 DNASE1L1P49184 302 aa14.2□□□□□ -0.14
USP47-207ENST00000527733 RSC1A1Q92681 617 aa14.2□□□□□ -0.14
USP47-207ENST00000527733 CDX2Q99626 313 aaPredicted RBP14.2□□□□□ -0.14
USP47-207ENST00000527733 SEC61A2Q9H9S3 476 aa14.2□□□□□ -0.14
USP47-207ENST00000527733 PLAC1Q9HBJ0 212 aa14.2□□□□□ -0.14
USP47-207ENST00000527733 ABCB10Q9NRK6 738 aa14.2□□□□□ -0.14
USP47-207ENST00000527733 SPHK1Q9NYA1 384 aa14.2□□□□□ -0.14
USP47-207ENST00000527733 RP1L1Q8IWN7 2480 aaPredicted RBP14.2□□□□□ -0.14
USP47-207ENST00000527733 M0R3H8 397 aa14.2□□□□□ -0.14
USP47-207ENST00000527733 YY2O15391 372 aa14.2□□□□□ -0.14
USP47-207ENST00000527733 DCTP40126 519 aa14.2□□□□□ -0.14
USP47-207ENST00000527733 OMPP47874 163 aa14.2□□□□□ -0.14
USP47-207ENST00000527733 ERV3-1Q14264 604 aa14.2□□□□□ -0.14
USP47-207ENST00000527733 PUM1Q14671 1186 aaKnown RBP eCLIP14.2□□□□□ -0.14
USP47-207ENST00000527733 PLEKHA1Q9HB21 404 aa14.2□□□□□ -0.14
USP47-207ENST00000527733 RPRD1BQ9NQG5 326 aaKnown RBP14.2□□□□□ -0.14
USP47-207ENST00000527733 CENPMQ9NSP4 180 aa14.2□□□□□ -0.14
USP47-207ENST00000527733 KCMF1Q9P0J7 381 aa14.2□□□□□ -0.14
USP47-207ENST00000527733 B4GALT7Q9UBV7 327 aa14.2□□□□□ -0.14
USP47-207ENST00000527733 ITGA3P26006 1051 aa14.2□□□□□ -0.14
USP47-207ENST00000527733 CPOXP36551 454 aa14.2□□□□□ -0.14
USP47-207ENST00000527733 PYDC2Q56P42 97 aa14.2□□□□□ -0.14
USP47-207ENST00000527733 NKAIN2Q5VXU1 208 aa14.2□□□□□ -0.14
USP47-207ENST00000527733 MZT2BQ6NZ67 158 aa14.2□□□□□ -0.14
USP47-207ENST00000527733 P4HA3Q7Z4N8 544 aa14.2□□□□□ -0.14
USP47-207ENST00000527733 SNRNP27Q8WVK2 155 aaKnown RBP14.2□□□□□ -0.14
USP47-207ENST00000527733 CDS1Q92903 461 aa14.2□□□□□ -0.14
USP47-207ENST00000527733 PNPLA2Q96AD5 504 aa14.2□□□□□ -0.14
USP47-207ENST00000527733 EID2BQ96D98 161 aa14.2□□□□□ -0.14
USP47-207ENST00000527733 HSPBAP1Q96EW2 488 aa14.2□□□□□ -0.14
USP47-207ENST00000527733 GPER1Q99527 375 aa14.2□□□□□ -0.14
USP47-207ENST00000527733 GABRG3Q99928 467 aa14.2□□□□□ -0.14
USP47-207ENST00000527733 PISDQ9UG56 409 aa14.2□□□□□ -0.14
USP47-207ENST00000527733 RIMS3Q9UJD0 308 aa14.2□□□□□ -0.14
USP47-207ENST00000527733 ICKQ9UPZ9 632 aa14.2□□□□□ -0.14
USP47-207ENST00000527733 TET1Q8NFU7 2136 aa14.19□□□□□ -0.14
USP47-207ENST00000527733 SPTY2D1-AS1A0A0U1RR47 76 aa14.19□□□□□ -0.14
USP47-207ENST00000527733 PLPP1O14494 284 aa14.19□□□□□ -0.14
USP47-207ENST00000527733 VASPP50552 380 aaPredicted RBP14.19□□□□□ -0.14
USP47-207ENST00000527733 TUBA4AP68366 448 aa14.19□□□□□ -0.14
USP47-207ENST00000527733 ZNF846Q147U1 533 aa14.19□□□□□ -0.14
USP47-207ENST00000527733 TMEM225Q6GV28 225 aa14.19□□□□□ -0.14
USP47-207ENST00000527733 PGM2L1Q6PCE3 622 aa14.19□□□□□ -0.14
USP47-207ENST00000527733 ASB15Q8WXK1 588 aa14.19□□□□□ -0.14
USP47-207ENST00000527733 ADAD1Q96M93 576 aaKnown RBP14.19□□□□□ -0.14
USP47-207ENST00000527733 ERMAPQ96PL5 475 aaPredicted RBP14.19□□□□□ -0.14
USP47-207ENST00000527733 ZC4H2Q9NQZ6 224 aa14.19□□□□□ -0.14
USP47-207ENST00000527733 TCRBV3S1A0A5B6 114 aa14.19□□□□□ -0.14
USP47-207ENST00000527733 SOCS2O14508 198 aa14.19□□□□□ -0.14
USP47-207ENST00000527733 PROM1O43490 865 aa14.19□□□□□ -0.14
USP47-207ENST00000527733 ARAFP10398 606 aa14.19□□□□□ -0.14
USP47-207ENST00000527733 OR1D5P58170 312 aa14.19□□□□□ -0.14
USP47-207ENST00000527733 PIN1Q13526 163 aaPredicted RBP14.19□□□□□ -0.14
USP47-207ENST00000527733 ZBED5Q49AG3 693 aa14.19□□□□□ -0.14
USP47-207ENST00000527733 DCST2Q5T1A1 773 aa14.19□□□□□ -0.14
USP47-207ENST00000527733 C18orf63Q68DL7 685 aa14.19□□□□□ -0.14
USP47-207ENST00000527733 SLC5A8Q8N695 610 aa14.19□□□□□ -0.14
USP47-207ENST00000527733 OR7D2Q96RA2 312 aa14.19□□□□□ -0.14
USP47-207ENST00000527733 SPRTNQ9H040 489 aaPredicted RBP14.19□□□□□ -0.14
USP47-207ENST00000527733 NANSQ9NR45 359 aa14.19□□□□□ -0.14
USP47-207ENST00000527733 LRIT2A6NDA9 550 aa14.19□□□□□ -0.14
USP47-207ENST00000527733 P04436 131 aa14.19□□□□□ -0.14
USP47-207ENST00000527733 DRD3P35462 400 aa14.19□□□□□ -0.14
USP47-207ENST00000527733 SELPLGQ14242 412 aa14.19□□□□□ -0.14
USP47-207ENST00000527733 C6orf141Q5SZD1 244 aa14.19□□□□□ -0.14
USP47-207ENST00000527733 RAB43Q86YS6 212 aa14.19□□□□□ -0.14
USP47-207ENST00000527733 WDR12Q9GZL7 423 aaKnown RBP14.19□□□□□ -0.14
USP47-207ENST00000527733 TUBA8Q9NY65 449 aaPredicted RBP14.19□□□□□ -0.14
USP47-207ENST00000527733 EFCAB7A8K855 629 aa14.18□□□□□ -0.14
USP47-207ENST00000527733 SERPINA3P01011 423 aa14.18□□□□□ -0.14
USP47-207ENST00000527733 MAT1AQ00266 395 aaKnown RBP14.18□□□□□ -0.14
USP47-207ENST00000527733 TAB1Q15750 504 aa14.18□□□□□ -0.14
USP47-207ENST00000527733 FAM71E1Q6IPT2 247 aa14.18□□□□□ -0.14
USP47-207ENST00000527733 ZNF773Q6PK81 442 aa14.18□□□□□ -0.14
USP47-207ENST00000527733 CBLL1Q75N03 491 aa14.18□□□□□ -0.14
USP47-207ENST00000527733 LAS2Q8IYD9 372 aa14.18□□□□□ -0.14
USP47-207ENST00000527733 HORMAD2Q8N7B1 307 aa14.18□□□□□ -0.14
USP47-207ENST00000527733 ZNF676Q8N7Q3 588 aa14.18□□□□□ -0.14
USP47-207ENST00000527733 ZSCAN1Q8NBB4 408 aa14.18□□□□□ -0.14
USP47-207ENST00000527733 SLC41A3Q96GZ6 507 aa14.18□□□□□ -0.14
USP47-207ENST00000527733 GALNT8Q9NY28 637 aa14.18□□□□□ -0.14
USP47-207ENST00000527733 VSTM2BA6NLU5 285 aa14.18□□□□□ -0.14
USP47-207ENST00000527733 CDC40O60508 579 aaKnown RBP eCLIP14.18□□□□□ -0.14
USP47-207ENST00000527733 GNALP38405 381 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms