RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 DMRTB1Q96MA1 342 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 TM9SF2Q99805 663 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 SPATA5L1Q9BVQ7 753 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 SAP130Q9H0E3 1048 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 TMEM245Q9H330 911 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 TOR4AQ9NXH8 423 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 SNX7Q9UNH6 387 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.97□□□□□ -0.65
LINC01001-201ENST00000526704 KCNE3Q9Y6H6 103 aa10.97□□□□□ -0.65
LINC01001-201ENST00000526704 A0A0B4J293 547 aa10.96□□□□□ -0.65
LINC01001-201ENST00000526704 FABP12A6NFH5 140 aa10.96□□□□□ -0.65
LINC01001-201ENST00000526704 OTOL1A6NHN0 477 aaPredicted RBP10.96□□□□□ -0.65
LINC01001-201ENST00000526704 HMX3A6NHT5 357 aa10.96□□□□□ -0.65
LINC01001-201ENST00000526704 KDM4EB2RXH2 506 aaPredicted RBP10.96□□□□□ -0.65
LINC01001-201ENST00000526704 POLR1CO15160 346 aaPredicted RBP10.96□□□□□ -0.65
LINC01001-201ENST00000526704 CASC3O15234 703 aaKnown RBP10.96□□□□□ -0.65
LINC01001-201ENST00000526704 FGBP02675 491 aa10.96□□□□□ -0.65
LINC01001-201ENST00000526704 HMGN2P05204 90 aaKnown RBP10.96□□□□□ -0.65
LINC01001-201ENST00000526704 LIMS3P0CW19 117 aa10.96□□□□□ -0.65
LINC01001-201ENST00000526704 LIMS4P0CW20 117 aa10.96□□□□□ -0.65
LINC01001-201ENST00000526704 TRAPPC2P0DI81 140 aa10.96□□□□□ -0.65
LINC01001-201ENST00000526704 TRAPPC2BP0DI82 140 aa10.96□□□□□ -0.65
LINC01001-201ENST00000526704 SSTR4P31391 388 aa10.96□□□□□ -0.65
LINC01001-201ENST00000526704 CLCNKAP51800 687 aa10.96□□□□□ -0.65
LINC01001-201ENST00000526704 HTRA4P83105 476 aaPredicted RBP10.96□□□□□ -0.65
LINC01001-201ENST00000526704 FABP5Q01469 135 aa10.96□□□□□ -0.65
LINC01001-201ENST00000526704 UBE3AQ05086 875 aa10.96□□□□□ -0.65
LINC01001-201ENST00000526704 MAP4K2Q12851 820 aa10.96□□□□□ -0.65
LINC01001-201ENST00000526704 HSDL2Q6YN16 418 aa10.96□□□□□ -0.65
LINC01001-201ENST00000526704 C11orf74Q86VG3 221 aa10.96□□□□□ -0.65
LINC01001-201ENST00000526704 RDH10Q8IZV5 341 aa10.96□□□□□ -0.65
LINC01001-201ENST00000526704 GDPD1Q8N9F7 314 aa10.96□□□□□ -0.65
LINC01001-201ENST00000526704 ZNF485Q8NCK3 441 aa10.96□□□□□ -0.65
LINC01001-201ENST00000526704 OR52P1PQ8NH57 321 aa10.96□□□□□ -0.65
LINC01001-201ENST00000526704 SFXN5Q8TD22 340 aa10.96□□□□□ -0.65
LINC01001-201ENST00000526704 TRIM43Q96BQ3 446 aaPredicted RBP10.96□□□□□ -0.65
LINC01001-201ENST00000526704 RNF31Q96EP0 1072 aa10.96□□□□□ -0.65
LINC01001-201ENST00000526704 BBS4Q96RK4 519 aa10.96□□□□□ -0.65
LINC01001-201ENST00000526704 PINK1Q9BXM7 581 aa10.96□□□□□ -0.65
LINC01001-201ENST00000526704 ISYNA1Q9NPH2 558 aa10.96□□□□□ -0.65
LINC01001-201ENST00000526704 SCN3AQ9NY46 2000 aa10.96□□□□□ -0.66
LINC01001-201ENST00000526704 A0A1W2PS29 197 aa10.96□□□□□ -0.66
LINC01001-201ENST00000526704 ANKRD34BA5PLL1 514 aa10.96□□□□□ -0.66
LINC01001-201ENST00000526704 ANTXRLA6NF34 631 aa10.96□□□□□ -0.66
LINC01001-201ENST00000526704 FRS3O43559 492 aa10.96□□□□□ -0.66
LINC01001-201ENST00000526704 TMCC2O75069 709 aa10.96□□□□□ -0.66
LINC01001-201ENST00000526704 TIMP1P01033 207 aa10.96□□□□□ -0.66
LINC01001-201ENST00000526704 SLC35G4P0C7Q5 338 aa10.96□□□□□ -0.66
LINC01001-201ENST00000526704 SOX18P35713 384 aa10.96□□□□□ -0.66
LINC01001-201ENST00000526704 VIPR2P41587 438 aa10.96□□□□□ -0.66
LINC01001-201ENST00000526704 CAV3P56539 151 aa10.96□□□□□ -0.66
LINC01001-201ENST00000526704 DAB2P98082 770 aa10.96□□□□□ -0.66
LINC01001-201ENST00000526704 MADCAM1Q13477 382 aa10.96□□□□□ -0.66
LINC01001-201ENST00000526704 MLF2Q15773 248 aaPredicted RBP10.96□□□□□ -0.66
LINC01001-201ENST00000526704 CRTC2Q53ET0 693 aaPredicted RBP10.96□□□□□ -0.66
LINC01001-201ENST00000526704 ZNF628Q5EBL2 1059 aa10.96□□□□□ -0.66
LINC01001-201ENST00000526704 PPP2R2DQ66LE6 453 aa10.96□□□□□ -0.66
LINC01001-201ENST00000526704 KIAA1161Q6NSJ0 714 aa10.96□□□□□ -0.66
LINC01001-201ENST00000526704 SLC27A4Q6P1M0 643 aa10.96□□□□□ -0.66
LINC01001-201ENST00000526704 ZNF730Q6ZMV8 503 aa10.96□□□□□ -0.66
LINC01001-201ENST00000526704 ANKK1Q8NFD2 765 aa10.96□□□□□ -0.66
LINC01001-201ENST00000526704 UFD1Q92890 307 aa10.96□□□□□ -0.66
LINC01001-201ENST00000526704 C1GALT1C1Q96EU7 318 aa10.96□□□□□ -0.66
LINC01001-201ENST00000526704 CNRIP1Q96F85 164 aaPredicted RBP10.96□□□□□ -0.66
LINC01001-201ENST00000526704 C16orf58Q96GQ5 468 aa10.96□□□□□ -0.66
LINC01001-201ENST00000526704 MACROD1Q9BQ69 325 aa10.96□□□□□ -0.66
LINC01001-201ENST00000526704 POLMQ9NP87 494 aaPredicted RBP10.96□□□□□ -0.66
LINC01001-201ENST00000526704 ZDHHC4Q9NPG8 344 aa10.96□□□□□ -0.66
LINC01001-201ENST00000526704 CNIH4Q9P003 139 aa10.96□□□□□ -0.66
LINC01001-201ENST00000526704 GPR55Q9Y2T6 319 aaPredicted RBP10.96□□□□□ -0.66
LINC01001-201ENST00000526704 EXOSC1Q9Y3B2 195 aaKnown RBP10.96□□□□□ -0.66
LINC01001-201ENST00000526704 A0A0G2JPF8 293 aa10.95□□□□□ -0.66
LINC01001-201ENST00000526704 IRGMA1A4Y4 181 aa10.95□□□□□ -0.66
LINC01001-201ENST00000526704 FAM170BA6NMN3 283 aa10.95□□□□□ -0.66
LINC01001-201ENST00000526704 HNRNPCL2B2RXH8 293 aa10.95□□□□□ -0.66
LINC01001-201ENST00000526704 B4DXG7 233 aa10.95□□□□□ -0.66
LINC01001-201ENST00000526704 HNRNPCL3B7ZW38 293 aa10.95□□□□□ -0.66
LINC01001-201ENST00000526704 SLC30A4O14863 429 aa10.95□□□□□ -0.66
LINC01001-201ENST00000526704 PGRMC2O15173 223 aa10.95□□□□□ -0.66
LINC01001-201ENST00000526704 ERAL1O75616 437 aaKnown RBP10.95□□□□□ -0.66
LINC01001-201ENST00000526704 LALBAP00709 142 aa10.95□□□□□ -0.66
LINC01001-201ENST00000526704 HNRNPCL4P0DMR1 293 aa10.95□□□□□ -0.66
LINC01001-201ENST00000526704 HOXB3P14651 431 aaPredicted RBP10.95□□□□□ -0.66
LINC01001-201ENST00000526704 GABRA5P31644 462 aa10.95□□□□□ -0.66
LINC01001-201ENST00000526704 BCL6P41182 706 aa10.95□□□□□ -0.66
LINC01001-201ENST00000526704 MTNR1AP48039 350 aa10.95□□□□□ -0.66
LINC01001-201ENST00000526704 TAS2R41P59536 307 aa10.95□□□□□ -0.66
LINC01001-201ENST00000526704 HOXC5Q00444 222 aa10.95□□□□□ -0.66
LINC01001-201ENST00000526704 DMPKQ09013 629 aa10.95□□□□□ -0.66
LINC01001-201ENST00000526704 GPAT3Q53EU6 434 aa10.95□□□□□ -0.66
LINC01001-201ENST00000526704 SLC35F1Q5T1Q4 408 aa10.95□□□□□ -0.66
LINC01001-201ENST00000526704 PDZK1Q5T2W1 519 aa10.95□□□□□ -0.66
LINC01001-201ENST00000526704 PIP5KL1Q5T9C9 394 aa10.95□□□□□ -0.66
LINC01001-201ENST00000526704 TMEM107Q6UX40 140 aa10.95□□□□□ -0.66
LINC01001-201ENST00000526704 PRR23CQ6ZRP0 262 aa10.95□□□□□ -0.66
LINC01001-201ENST00000526704 VASH1Q7L8A9 365 aaPredicted RBP10.95□□□□□ -0.66
LINC01001-201ENST00000526704 PRICKLE2Q7Z3G6 844 aa10.95□□□□□ -0.66
LINC01001-201ENST00000526704 FAM20CQ8IXL6 584 aa10.95□□□□□ -0.66
LINC01001-201ENST00000526704 VWA5B2Q8N398 1253 aa10.95□□□□□ -0.66
LINC01001-201ENST00000526704 CAMKK1Q8N5S9 505 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms