RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 MATN1P21941 496 aa12.16□□□□□ -0.46
CPNE3-205ENST00000522240 MAN2A2P49641 1150 aa12.16□□□□□ -0.46
CPNE3-205ENST00000522240 PGDP52209 483 aa12.16□□□□□ -0.46
CPNE3-205ENST00000522240 PRKAG1P54619 331 aa12.16□□□□□ -0.46
CPNE3-205ENST00000522240 RPS26P62854 115 aaKnown RBP12.16□□□□□ -0.46
CPNE3-205ENST00000522240 ZNF155Q12901 538 aaPredicted RBP12.16□□□□□ -0.46
CPNE3-205ENST00000522240 DUSP8Q13202 625 aa12.16□□□□□ -0.46
CPNE3-205ENST00000522240 DNASE1L3Q13609 305 aa12.16□□□□□ -0.46
CPNE3-205ENST00000522240 VEZF1Q14119 521 aa12.16□□□□□ -0.46
CPNE3-205ENST00000522240 FLOT2Q14254 428 aa12.16□□□□□ -0.46
CPNE3-205ENST00000522240 RTP5Q14D33 572 aa12.16□□□□□ -0.46
CPNE3-205ENST00000522240 EXOSC7Q15024 291 aaKnown RBP12.16□□□□□ -0.46
CPNE3-205ENST00000522240 ADRM1Q16186 407 aa12.16□□□□□ -0.46
CPNE3-205ENST00000522240 ZNF630Q2M218 657 aaPredicted RBP12.16□□□□□ -0.46
CPNE3-205ENST00000522240 SFT2D3Q587I9 215 aa12.16□□□□□ -0.46
CPNE3-205ENST00000522240 MTX3Q5HYI7 312 aa12.16□□□□□ -0.46
CPNE3-205ENST00000522240 TNFAIP8L2Q6P589 184 aaPredicted RBP12.16□□□□□ -0.46
CPNE3-205ENST00000522240 PROSER1Q86XN7 944 aa12.16□□□□□ -0.46
CPNE3-205ENST00000522240 HORMAD2Q8N7B1 307 aa12.16□□□□□ -0.46
CPNE3-205ENST00000522240 OR52R1Q8NGF1 315 aa12.16□□□□□ -0.46
CPNE3-205ENST00000522240 SLC2A12Q8TD20 617 aa12.16□□□□□ -0.46
CPNE3-205ENST00000522240 NXPE2Q96DL1 559 aa12.16□□□□□ -0.46
CPNE3-205ENST00000522240 STACQ99469 402 aa12.16□□□□□ -0.46
CPNE3-205ENST00000522240 GPR87Q9BY21 358 aa12.16□□□□□ -0.46
CPNE3-205ENST00000522240 OR51I1Q9H343 314 aa12.16□□□□□ -0.46
CPNE3-205ENST00000522240 EQTNQ9NQ60 294 aa12.16□□□□□ -0.46
CPNE3-205ENST00000522240 DUSP22Q9NRW4 184 aa12.16□□□□□ -0.46
CPNE3-205ENST00000522240 THSD1Q9NS62 852 aa12.16□□□□□ -0.46
CPNE3-205ENST00000522240 GMPR2Q9P2T1 348 aaKnown RBP12.16□□□□□ -0.46
CPNE3-205ENST00000522240 P2RX2Q9UBL9 471 aa12.16□□□□□ -0.46
CPNE3-205ENST00000522240 PRODH2Q9UF12 536 aa12.16□□□□□ -0.46
CPNE3-205ENST00000522240 PPIEQ9UNP9 301 aaKnown RBP12.16□□□□□ -0.46
CPNE3-205ENST00000522240 CFL2Q9Y281 166 aa12.16□□□□□ -0.46
CPNE3-205ENST00000522240 HEMK1Q9Y5R4 338 aaPredicted RBP12.16□□□□□ -0.46
CPNE3-205ENST00000522240 TMEM8BA6NDV4 472 aa12.15□□□□□ -0.46
CPNE3-205ENST00000522240 TMEM247A6NEH6 219 aa12.15□□□□□ -0.46
CPNE3-205ENST00000522240 OR6C76A6NM76 312 aa12.15□□□□□ -0.46
CPNE3-205ENST00000522240 H0YHG0 523 aa12.15□□□□□ -0.46
CPNE3-205ENST00000522240 HMGN4O00479 90 aa12.15□□□□□ -0.46
CPNE3-205ENST00000522240 AK1P00568 194 aa12.15□□□□□ -0.46
CPNE3-205ENST00000522240 F12P00748 615 aaPredicted RBP12.15□□□□□ -0.46
CPNE3-205ENST00000522240 CLPSP04118 112 aa12.15□□□□□ -0.46
CPNE3-205ENST00000522240 ACP2P11117 423 aa12.15□□□□□ -0.46
CPNE3-205ENST00000522240 TCN2P20062 427 aa12.15□□□□□ -0.46
CPNE3-205ENST00000522240 SSTR4P31391 388 aa12.15□□□□□ -0.46
CPNE3-205ENST00000522240 MAP3K8P41279 467 aa12.15□□□□□ -0.46
CPNE3-205ENST00000522240 EMDP50402 254 aa12.15□□□□□ -0.46
CPNE3-205ENST00000522240 POLE2P56282 527 aa12.15□□□□□ -0.46
CPNE3-205ENST00000522240 FOXL2P58012 376 aa12.15□□□□□ -0.46
CPNE3-205ENST00000522240 ACTR3P61158 418 aa12.15□□□□□ -0.46
CPNE3-205ENST00000522240 RPS15P62841 145 aaKnown RBP12.15□□□□□ -0.46
CPNE3-205ENST00000522240 MS4A2Q01362 244 aa12.15□□□□□ -0.46
CPNE3-205ENST00000522240 EEF1A2Q05639 463 aaKnown RBP12.15□□□□□ -0.46
CPNE3-205ENST00000522240 GNA13Q14344 377 aa12.15□□□□□ -0.46
CPNE3-205ENST00000522240 INTS11Q5TA45 600 aaKnown RBP12.15□□□□□ -0.46
CPNE3-205ENST00000522240 CPEB2Q7Z5Q1 589 aaKnown RBP12.15□□□□□ -0.46
CPNE3-205ENST00000522240 MARCH9Q86YJ5 346 aa12.15□□□□□ -0.46
CPNE3-205ENST00000522240 ZNF615Q8N8J6 731 aa12.15□□□□□ -0.46
CPNE3-205ENST00000522240 KDF1Q8NAX2 398 aaPredicted RBP12.15□□□□□ -0.46
CPNE3-205ENST00000522240 GOLM1Q8NBJ4 401 aa12.15□□□□□ -0.46
CPNE3-205ENST00000522240 HIPK4Q8NE63 616 aa12.15□□□□□ -0.46
CPNE3-205ENST00000522240 OR52E4Q8NGH9 312 aa12.15□□□□□ -0.46
CPNE3-205ENST00000522240 WDR60Q8WVS4 1066 aa12.15□□□□□ -0.46
CPNE3-205ENST00000522240 POP5Q969H6 163 aaKnown RBP12.15□□□□□ -0.46
CPNE3-205ENST00000522240 NACC2Q96BF6 587 aa12.15□□□□□ -0.46
CPNE3-205ENST00000522240 SENP5Q96HI0 755 aaPredicted RBP12.15□□□□□ -0.46
CPNE3-205ENST00000522240 VSTM2LQ96N03 204 aa12.15□□□□□ -0.46
CPNE3-205ENST00000522240 OR7D2Q96RA2 312 aa12.15□□□□□ -0.46
CPNE3-205ENST00000522240 LMF2Q9BU23 707 aaKnown RBP12.15□□□□□ -0.46
CPNE3-205ENST00000522240 PCDHAC1Q9H158 963 aa12.15□□□□□ -0.46
CPNE3-205ENST00000522240 OR10A5Q9H207 317 aa12.15□□□□□ -0.46
CPNE3-205ENST00000522240 PIF1Q9H611 641 aa12.15□□□□□ -0.46
CPNE3-205ENST00000522240 ANKRA2Q9H9E1 313 aa12.15□□□□□ -0.46
CPNE3-205ENST00000522240 FOLH1BQ9HBA9 442 aa12.15□□□□□ -0.46
CPNE3-205ENST00000522240 COPS7AQ9UBW8 275 aa12.15□□□□□ -0.46
CPNE3-205ENST00000522240 EGFL7Q9UHF1 273 aa12.15□□□□□ -0.46
CPNE3-205ENST00000522240 TCFL5Q9UL49 500 aa12.15□□□□□ -0.46
CPNE3-205ENST00000522240 USP22Q9UPT9 525 aa12.15□□□□□ -0.46
CPNE3-205ENST00000522240 ANGPT4Q9Y264 503 aa12.15□□□□□ -0.46
CPNE3-205ENST00000522240 FARSAQ9Y285 508 aaKnown RBP12.15□□□□□ -0.46
CPNE3-205ENST00000522240 PCDHGA6Q9Y5G7 932 aa12.15□□□□□ -0.46
CPNE3-205ENST00000522240 SPEGQ15772 3267 aa12.15□□□□□ -0.46
CPNE3-205ENST00000522240 AKAP13Q12802 2813 aa12.14□□□□□ -0.47
CPNE3-205ENST00000522240 AQP12BA6NM10 295 aa12.14□□□□□ -0.47
CPNE3-205ENST00000522240 CXCR6O00574 342 aa12.14□□□□□ -0.47
CPNE3-205ENST00000522240 GSTA4O15217 222 aa12.14□□□□□ -0.47
CPNE3-205ENST00000522240 GMNNO75496 209 aa12.14□□□□□ -0.47
CPNE3-205ENST00000522240 NKX2-2O95096 273 aa12.14□□□□□ -0.47
CPNE3-205ENST00000522240 ALOX5P09917 674 aa12.14□□□□□ -0.47
CPNE3-205ENST00000522240 OR12D1P0DN82 309 aa12.14□□□□□ -0.47
CPNE3-205ENST00000522240 MMP11P24347 488 aa12.14□□□□□ -0.47
CPNE3-205ENST00000522240 SLC37A1P57057 533 aa12.14□□□□□ -0.47
CPNE3-205ENST00000522240 ELF3P78545 371 aaPredicted RBP12.14□□□□□ -0.47
CPNE3-205ENST00000522240 CDK6Q00534 326 aa12.14□□□□□ -0.47
CPNE3-205ENST00000522240 SCARB2Q14108 478 aa12.14□□□□□ -0.47
CPNE3-205ENST00000522240 KPNB1Q14974 876 aaKnown RBP12.14□□□□□ -0.47
CPNE3-205ENST00000522240 ZNHIT3Q15649 155 aaPredicted RBP12.14□□□□□ -0.47
CPNE3-205ENST00000522240 ATAD3BQ5T9A4 648 aa12.14□□□□□ -0.47
CPNE3-205ENST00000522240 PRAMEF8Q5VWM4 474 aa12.14□□□□□ -0.47
CPNE3-205ENST00000522240 PRAMEF7Q5VXH5 474 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms