RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 H0YL77 283 aa4.38□□□□□ -1.71
HMGB1P46-201ENST00000520062 CLDN5O00501 218 aa4.38□□□□□ -1.71
HMGB1P46-201ENST00000520062 SDHDO14521 159 aa4.38□□□□□ -1.71
HMGB1P46-201ENST00000520062 IMPA2O14732 288 aa4.38□□□□□ -1.71
HMGB1P46-201ENST00000520062 MCF2LO15068 1137 aa4.38□□□□□ -1.71
HMGB1P46-201ENST00000520062 MAGEB3O15480 346 aa4.38□□□□□ -1.71
HMGB1P46-201ENST00000520062 SDC3O75056 442 aa4.38□□□□□ -1.71
HMGB1P46-201ENST00000520062 RHOBTB1O94844 696 aa4.38□□□□□ -1.71
HMGB1P46-201ENST00000520062 DUS4LO95620 317 aaKnown RBP4.38□□□□□ -1.71
HMGB1P46-201ENST00000520062 IGSF6O95976 241 aa4.38□□□□□ -1.71
HMGB1P46-201ENST00000520062 OR9G9P0C7N8 305 aa4.38□□□□□ -1.71
HMGB1P46-201ENST00000520062 TSPAN8P19075 237 aa4.38□□□□□ -1.71
HMGB1P46-201ENST00000520062 UCP1P25874 307 aa4.38□□□□□ -1.71
HMGB1P46-201ENST00000520062 SAA4P35542 130 aa4.38□□□□□ -1.71
HMGB1P46-201ENST00000520062 HTR5AP47898 357 aa4.38□□□□□ -1.71
HMGB1P46-201ENST00000520062 VCPP55072 806 aaKnown RBP4.38□□□□□ -1.71
HMGB1P46-201ENST00000520062 LY6DQ14210 128 aa4.38□□□□□ -1.71
HMGB1P46-201ENST00000520062 NECTIN1Q15223 517 aa4.38□□□□□ -1.71
HMGB1P46-201ENST00000520062 CD226Q15762 336 aa4.38□□□□□ -1.71
HMGB1P46-201ENST00000520062 FAM182AQ5T1J6 154 aa4.38□□□□□ -1.71
HMGB1P46-201ENST00000520062 TAF3Q5VWG9 929 aa4.38□□□□□ -1.71
HMGB1P46-201ENST00000520062 KDELC1Q6UW63 502 aa4.38□□□□□ -1.71
HMGB1P46-201ENST00000520062 STOX1Q6ZVD7 989 aa4.38□□□□□ -1.71
HMGB1P46-201ENST00000520062 GRAMD2AQ8IUY3 354 aa4.38□□□□□ -1.71
HMGB1P46-201ENST00000520062 BIRC7Q96CA5 298 aa4.38□□□□□ -1.71
HMGB1P46-201ENST00000520062 OCR1Q9BZK8 76 aa4.38□□□□□ -1.71
HMGB1P46-201ENST00000520062 PALMDQ9NP74 551 aa4.38□□□□□ -1.71
HMGB1P46-201ENST00000520062 FAM114A2Q9NRY5 505 aa4.38□□□□□ -1.71
HMGB1P46-201ENST00000520062 RDH8Q9NYR8 311 aa4.38□□□□□ -1.71
HMGB1P46-201ENST00000520062 XPO7Q9UIA9 1087 aaKnown RBP4.38□□□□□ -1.71
HMGB1P46-201ENST00000520062 AP4B1Q9Y6B7 739 aa4.38□□□□□ -1.71
HMGB1P46-201ENST00000520062 IGLV4-3A0A075B6K6 122 aa4.37□□□□□ -1.71
HMGB1P46-201ENST00000520062 A0A087WYN8 130 aa4.37□□□□□ -1.71
HMGB1P46-201ENST00000520062 CLRN2A0PK11 232 aa4.37□□□□□ -1.71
HMGB1P46-201ENST00000520062 LRRC30A6NM36 301 aa4.37□□□□□ -1.71
HMGB1P46-201ENST00000520062 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P46-201ENST00000520062 H3BMH7 237 aa4.37□□□□□ -1.71
HMGB1P46-201ENST00000520062 IDH3BO43837 385 aa4.37□□□□□ -1.71
HMGB1P46-201ENST00000520062 JAK2O60674 1132 aa4.37□□□□□ -1.71
HMGB1P46-201ENST00000520062 PDE5AO76074 875 aa4.37□□□□□ -1.71
HMGB1P46-201ENST00000520062 CSF2P04141 144 aa4.37□□□□□ -1.71
HMGB1P46-201ENST00000520062 FCGR3AP08637 254 aa4.37□□□□□ -1.71
HMGB1P46-201ENST00000520062 PSMA2P25787 234 aa4.37□□□□□ -1.71
HMGB1P46-201ENST00000520062 CYLC1P35663 651 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P46-201ENST00000520062 RIDAP52758 137 aaKnown RBP4.37□□□□□ -1.71
HMGB1P46-201ENST00000520062 CRIP2P52943 208 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P46-201ENST00000520062 GBX2P52951 348 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P46-201ENST00000520062 PDK4Q16654 411 aa4.37□□□□□ -1.71
HMGB1P46-201ENST00000520062 TATDN3Q17R31 274 aa4.37□□□□□ -1.71
HMGB1P46-201ENST00000520062 BEND6Q5SZJ8 279 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P46-201ENST00000520062 SPATA46Q5T0L3 261 aa4.37□□□□□ -1.71
HMGB1P46-201ENST00000520062 LINC00242Q5T6M2 205 aa4.37□□□□□ -1.71
HMGB1P46-201ENST00000520062 ASPHD2Q6ICH7 369 aa4.37□□□□□ -1.71
HMGB1P46-201ENST00000520062 VASH2Q86V25 355 aa4.37□□□□□ -1.71
HMGB1P46-201ENST00000520062 RNF130Q86XS8 419 aa4.37□□□□□ -1.71
HMGB1P46-201ENST00000520062 CCDC71Q8IV32 467 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P46-201ENST00000520062 PHC2Q8IXK0 858 aa4.37□□□□□ -1.71
HMGB1P46-201ENST00000520062 SSC4DQ8WTU2 575 aa4.37□□□□□ -1.71
HMGB1P46-201ENST00000520062 TAF15Q92804 592 aaKnown RBP eCLIP4.37□□□□□ -1.71
HMGB1P46-201ENST00000520062 ADIPOR1Q96A54 375 aa4.37□□□□□ -1.71
HMGB1P46-201ENST00000520062 C4orf36Q96KX1 117 aa4.37□□□□□ -1.71
HMGB1P46-201ENST00000520062 CASD1Q96PB1 797 aa4.37□□□□□ -1.71
HMGB1P46-201ENST00000520062 ATF6BQ99941 703 aa4.37□□□□□ -1.71
HMGB1P46-201ENST00000520062 HSD17B14Q9BPX1 270 aa4.37□□□□□ -1.71
HMGB1P46-201ENST00000520062 FAM173AQ9BQD7 235 aa4.37□□□□□ -1.71
HMGB1P46-201ENST00000520062 CABLES2Q9BTV7 478 aa4.37□□□□□ -1.71
HMGB1P46-201ENST00000520062 MCRIP2Q9BUT9 160 aaKnown RBP4.37□□□□□ -1.71
HMGB1P46-201ENST00000520062 CALHM2Q9HA72 323 aa4.37□□□□□ -1.71
HMGB1P46-201ENST00000520062 ELL3Q9HB65 397 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P46-201ENST00000520062 ASIC3Q9UHC3 531 aa4.37□□□□□ -1.71
HMGB1P46-201ENST00000520062 MGAT4AQ9UM21 535 aa4.37□□□□□ -1.71
HMGB1P46-201ENST00000520062 EIF3LQ9Y262 564 aaKnown RBP4.37□□□□□ -1.71
HMGB1P46-201ENST00000520062 MAB21L2Q9Y586 359 aa4.37□□□□□ -1.71
HMGB1P46-201ENST00000520062 AUP1Q9Y679 476 aa4.37□□□□□ -1.71
HMGB1P46-201ENST00000520062 A8MUI8 341 aa4.36□□□□□ -1.71
HMGB1P46-201ENST00000520062 PDHXO00330 501 aa4.36□□□□□ -1.71
HMGB1P46-201ENST00000520062 SOCS3O14543 225 aa4.36□□□□□ -1.71
HMGB1P46-201ENST00000520062 XPO1O14980 1071 aaKnown RBP4.36□□□□□ -1.71
HMGB1P46-201ENST00000520062 RANBP6O60518 1105 aaKnown RBP4.36□□□□□ -1.71
HMGB1P46-201ENST00000520062 SORBS2O94875 1100 aaKnown RBP4.36□□□□□ -1.71
HMGB1P46-201ENST00000520062 GSTT2P0CG29 244 aa4.36□□□□□ -1.71
HMGB1P46-201ENST00000520062 GSTT2BP0CG30 244 aa4.36□□□□□ -1.71
HMGB1P46-201ENST00000520062 CLUP10909 449 aa4.36□□□□□ -1.71
HMGB1P46-201ENST00000520062 HOXB6P17509 224 aaKnown RBP4.36□□□□□ -1.71
HMGB1P46-201ENST00000520062 PPP2R1BP30154 601 aa4.36□□□□□ -1.71
HMGB1P46-201ENST00000520062 SLC7A2P52569 658 aa4.36□□□□□ -1.71
HMGB1P46-201ENST00000520062 NDUFV3P56181 108 aaKnown RBP4.36□□□□□ -1.71
HMGB1P46-201ENST00000520062 GSTO1P78417 241 aa4.36□□□□□ -1.71
HMGB1P46-201ENST00000520062 SPIBQ01892 262 aa4.36□□□□□ -1.71
HMGB1P46-201ENST00000520062 CCDC57Q2TAC2 916 aa4.36□□□□□ -1.71
HMGB1P46-201ENST00000520062 USH1GQ495M9 461 aa4.36□□□□□ -1.71
HMGB1P46-201ENST00000520062 LINC01620Q4KN68 170 aa4.36□□□□□ -1.71
HMGB1P46-201ENST00000520062 LRRC23Q53EV4 343 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P46-201ENST00000520062 CYBRD1Q53TN4 286 aa4.36□□□□□ -1.71
HMGB1P46-201ENST00000520062 CFAP157Q5JU67 520 aa4.36□□□□□ -1.71
HMGB1P46-201ENST00000520062 CASC1Q6TDU7 716 aa4.36□□□□□ -1.71
HMGB1P46-201ENST00000520062 RGS9BPQ6ZS82 235 aa4.36□□□□□ -1.71
HMGB1P46-201ENST00000520062 TSEN54Q7Z6J9 526 aaKnown RBP4.36□□□□□ -1.71
HMGB1P46-201ENST00000520062 UNC5CLQ8IV45 518 aa4.36□□□□□ -1.71
HMGB1P46-201ENST00000520062 WDSUB1Q8N9V3 476 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms