RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 H3BQF6 201 aa10.53□□□□□ -0.72
VCAN-212ENST00000515397 C19orf84I3L1E1 186 aa10.53□□□□□ -0.72
VCAN-212ENST00000515397 LSM1O15116 133 aaKnown RBP10.53□□□□□ -0.72
VCAN-212ENST00000515397 TRIM3O75382 744 aaPredicted RBP10.53□□□□□ -0.72
VCAN-212ENST00000515397 PPM1BO75688 479 aa10.53□□□□□ -0.72
VCAN-212ENST00000515397 TRAPPC6AO75865 159 aa10.53□□□□□ -0.72
VCAN-212ENST00000515397 CHEK2O96017 543 aa10.53□□□□□ -0.72
VCAN-212ENST00000515397 FGF4P08620 206 aa10.53□□□□□ -0.72
VCAN-212ENST00000515397 FREM3P0C091 2139 aa10.53□□□□□ -0.72
VCAN-212ENST00000515397 CT45A8P0DMV1 189 aa10.53□□□□□ -0.72
VCAN-212ENST00000515397 CT45A9P0DMV2 189 aa10.53□□□□□ -0.72
VCAN-212ENST00000515397 SDC1P18827 310 aa10.53□□□□□ -0.72
VCAN-212ENST00000515397 ENDOUP21128 410 aaKnown RBP10.53□□□□□ -0.72
VCAN-212ENST00000515397 GDF1P27539 372 aa10.53□□□□□ -0.72
VCAN-212ENST00000515397 HTR1EP28566 365 aa10.53□□□□□ -0.72
VCAN-212ENST00000515397 PPICP45877 212 aa10.53□□□□□ -0.72
VCAN-212ENST00000515397 SERPINB4P48594 390 aa10.53□□□□□ -0.72
VCAN-212ENST00000515397 MAN2A2P49641 1150 aa10.53□□□□□ -0.72
VCAN-212ENST00000515397 PMPCAQ10713 525 aa10.53□□□□□ -0.72
VCAN-212ENST00000515397 TOMM20Q15388 145 aa10.53□□□□□ -0.72
VCAN-212ENST00000515397 CHI3L2Q15782 390 aa10.53□□□□□ -0.72
VCAN-212ENST00000515397 CT45A2Q5DJT8 189 aa10.53□□□□□ -0.72
VCAN-212ENST00000515397 FNDC7Q5VTL7 733 aa10.53□□□□□ -0.72
VCAN-212ENST00000515397 OR5M10Q6IEU7 315 aa10.53□□□□□ -0.72
VCAN-212ENST00000515397 BNC2Q6ZN30 1099 aaPredicted RBP10.53□□□□□ -0.72
VCAN-212ENST00000515397 CCDC71Q8IV32 467 aaPredicted RBP10.53□□□□□ -0.72
VCAN-212ENST00000515397 SLC44A2Q8IWA5 706 aaPredicted RBP10.53□□□□□ -0.72
VCAN-212ENST00000515397 PPP1R14CQ8TAE6 165 aa10.53□□□□□ -0.72
VCAN-212ENST00000515397 ZNF675Q8TD23 568 aa10.53□□□□□ -0.72
VCAN-212ENST00000515397 HGDQ93099 445 aa10.53□□□□□ -0.72
VCAN-212ENST00000515397 AMDHD1Q96NU7 426 aa10.53□□□□□ -0.72
VCAN-212ENST00000515397 DMRTA2Q96SC8 542 aa10.53□□□□□ -0.72
VCAN-212ENST00000515397 ADOQ96SZ5 270 aa10.53□□□□□ -0.72
VCAN-212ENST00000515397 C1orf50Q9BV19 199 aa10.53□□□□□ -0.72
VCAN-212ENST00000515397 C20orf27Q9GZN8 174 aa10.53□□□□□ -0.72
VCAN-212ENST00000515397 METTL7AQ9H8H3 244 aa10.53□□□□□ -0.72
VCAN-212ENST00000515397 FOLH1BQ9HBA9 442 aa10.53□□□□□ -0.72
VCAN-212ENST00000515397 EML4Q9HC35 981 aaKnown RBP10.53□□□□□ -0.72
VCAN-212ENST00000515397 PLSCR2Q9NRY7 297 aa10.53□□□□□ -0.72
VCAN-212ENST00000515397 SH3BP4Q9P0V3 963 aa10.53□□□□□ -0.72
VCAN-212ENST00000515397 SPRR3Q9UBC9 169 aa10.53□□□□□ -0.72
VCAN-212ENST00000515397 PRODH2Q9UF12 536 aa10.53□□□□□ -0.72
VCAN-212ENST00000515397 ACAD8Q9UKU7 415 aa10.53□□□□□ -0.72
VCAN-212ENST00000515397 BOKQ9UMX3 212 aaPredicted RBP10.53□□□□□ -0.72
VCAN-212ENST00000515397 CFL2Q9Y281 166 aa10.53□□□□□ -0.72
VCAN-212ENST00000515397 GPR55Q9Y2T6 319 aaPredicted RBP10.53□□□□□ -0.72
VCAN-212ENST00000515397 ABCA12Q86UK0 2595 aa10.53□□□□□ -0.72
VCAN-212ENST00000515397 KDM4EB2RXH2 506 aaPredicted RBP10.52□□□□□ -0.73
VCAN-212ENST00000515397 E9PLN8 166 aa10.52□□□□□ -0.73
VCAN-212ENST00000515397 UPK1AO00322 258 aa10.52□□□□□ -0.73
VCAN-212ENST00000515397 ICOSLGO75144 302 aa10.52□□□□□ -0.73
VCAN-212ENST00000515397 ERN1O75460 977 aaKnown RBP10.52□□□□□ -0.73
VCAN-212ENST00000515397 IGHG3P01860 377 aa10.52□□□□□ -0.73
VCAN-212ENST00000515397 BCKDHAP12694 445 aa10.52□□□□□ -0.73
VCAN-212ENST00000515397 DRD5P21918 477 aa10.52□□□□□ -0.73
VCAN-212ENST00000515397 TCEA1P23193 301 aaKnown RBP10.52□□□□□ -0.73
VCAN-212ENST00000515397 PTGDSP41222 190 aa10.52□□□□□ -0.73
VCAN-212ENST00000515397 RFX3P48380 749 aa10.52□□□□□ -0.73
VCAN-212ENST00000515397 MASP1P48740 699 aa10.52□□□□□ -0.73
VCAN-212ENST00000515397 PRKAG1P54619 331 aa10.52□□□□□ -0.73
VCAN-212ENST00000515397 ZNF155Q12901 538 aaPredicted RBP10.52□□□□□ -0.73
VCAN-212ENST00000515397 HSPB3Q12988 150 aa10.52□□□□□ -0.73
VCAN-212ENST00000515397 CEBPEQ15744 281 aa10.52□□□□□ -0.73
VCAN-212ENST00000515397 HYAL4Q2M3T9 481 aa10.52□□□□□ -0.73
VCAN-212ENST00000515397 EIPR1Q53HC9 387 aa10.52□□□□□ -0.73
VCAN-212ENST00000515397 PAOXQ6QHF9 649 aa10.52□□□□□ -0.73
VCAN-212ENST00000515397 ANGPTL8Q6UXH0 198 aa10.52□□□□□ -0.73
VCAN-212ENST00000515397 RGS9BPQ6ZS82 235 aa10.52□□□□□ -0.73
VCAN-212ENST00000515397 YRDCQ86U90 279 aaKnown RBP10.52□□□□□ -0.73
VCAN-212ENST00000515397 ZNF808Q8N4W9 903 aaPredicted RBP10.52□□□□□ -0.73
VCAN-212ENST00000515397 ANKRD42Q8N9B4 389 aa10.52□□□□□ -0.73
VCAN-212ENST00000515397 OR6Y1Q8NGX8 325 aa10.52□□□□□ -0.73
VCAN-212ENST00000515397 FAM76AQ8TAV0 307 aa10.52□□□□□ -0.73
VCAN-212ENST00000515397 EFHD2Q96C19 240 aaPredicted RBP10.52□□□□□ -0.73
VCAN-212ENST00000515397 SDCCAG3Q96C92 435 aa10.52□□□□□ -0.73
VCAN-212ENST00000515397 ELP4Q96EB1 424 aa10.52□□□□□ -0.73
VCAN-212ENST00000515397 HSPBAP1Q96EW2 488 aa10.52□□□□□ -0.73
VCAN-212ENST00000515397 VSTM2LQ96N03 204 aa10.52□□□□□ -0.73
VCAN-212ENST00000515397 VKORC1Q9BQB6 163 aa10.52□□□□□ -0.73
VCAN-212ENST00000515397 ANGPTL4Q9BY76 406 aa10.52□□□□□ -0.73
VCAN-212ENST00000515397 UCK2Q9BZX2 261 aa10.52□□□□□ -0.73
VCAN-212ENST00000515397 ZNF703Q9H7S9 590 aaPredicted RBP10.52□□□□□ -0.73
VCAN-212ENST00000515397 EQTNQ9NQ60 294 aa10.52□□□□□ -0.73
VCAN-212ENST00000515397 FLRT3Q9NZU0 649 aa10.52□□□□□ -0.73
VCAN-212ENST00000515397 MAPRE3Q9UPY8 281 aa10.52□□□□□ -0.73
VCAN-212ENST00000515397 SLC6A5Q9Y345 797 aa10.52□□□□□ -0.73
VCAN-212ENST00000515397 NCKAP5O14513 1909 aa10.52□□□□□ -0.73
VCAN-212ENST00000515397 ANKRD33BA6NCL7 494 aa10.51□□□□□ -0.73
VCAN-212ENST00000515397 FRG2CA6NGY1 282 aa10.51□□□□□ -0.73
VCAN-212ENST00000515397 PLOD3O60568 738 aa10.51□□□□□ -0.73
VCAN-212ENST00000515397 HSPA4LO95757 839 aa10.51□□□□□ -0.73
VCAN-212ENST00000515397 PRF1P14222 555 aa10.51□□□□□ -0.73
VCAN-212ENST00000515397 BGNP21810 368 aa10.51□□□□□ -0.73
VCAN-212ENST00000515397 PRPH2P23942 346 aa10.51□□□□□ -0.73
VCAN-212ENST00000515397 NTSP30990 170 aa10.51□□□□□ -0.73
VCAN-212ENST00000515397 CDK9P50750 372 aaKnown RBP10.51□□□□□ -0.73
VCAN-212ENST00000515397 SMSP52788 366 aa10.51□□□□□ -0.73
VCAN-212ENST00000515397 WNT3P56703 355 aa10.51□□□□□ -0.73
VCAN-212ENST00000515397 NUP107P57740 925 aa10.51□□□□□ -0.73
VCAN-212ENST00000515397 GAB1Q13480 694 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms