RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 DESI2Q9BSY9 194 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 RBM4Q9BWF3 364 aaKnown RBP3.68□□□□□ -1.82
HTT-210ENST00000512909 TDRD1Q9BXT4 1180 aaKnown RBP3.68□□□□□ -1.82
HTT-210ENST00000512909 NACA2Q9H009 215 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 ATP13A3Q9H7F0 1226 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 UBE2TQ9NPD8 197 aaPredicted RBP3.68□□□□□ -1.82
HTT-210ENST00000512909 ZNF71Q9NQZ8 489 aaPredicted RBP3.68□□□□□ -1.82
HTT-210ENST00000512909 HEBP1Q9NRV9 189 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 AGPAT3Q9NRZ7 376 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 RMND1Q9NWS8 449 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 C2orf42Q9NWW7 574 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 EPS15L1Q9UBC2 864 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 PLCL2Q9UPR0 1127 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 LIPT1Q9Y234 373 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 EXOGQ9Y2C4 368 aaKnown RBP3.68□□□□□ -1.82
HTT-210ENST00000512909 MTF2Q9Y483 593 aaPredicted RBP3.68□□□□□ -1.82
HTT-210ENST00000512909 ASB3Q9Y575 518 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 COL4A6Q14031 1691 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 PTPRSQ13332 1948 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 SIP14410 1827 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 PRRC2BQ5JSZ5 2229 aaKnown RBP3.67□□□□□ -1.82
HTT-210ENST00000512909 IGLV7-46A0A075B6I9 117 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 A0A0B4J203 849 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 LRRIQ3A6PVS8 624 aaPredicted RBP3.67□□□□□ -1.82
HTT-210ENST00000512909 ANHXE9PGG2 379 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 CLDN5O00501 218 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 PES1O00541 588 aaKnown RBP3.67□□□□□ -1.82
HTT-210ENST00000512909 PDXKO00764 312 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 SLC7A4O43246 635 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 KLRC4O43908 158 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 KIF5CO60282 957 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 FAM189A1O60320 539 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 STX10O60499 249 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 ECI2O75521 394 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 LETM1O95202 739 aaPredicted RBP3.67□□□□□ -1.82
HTT-210ENST00000512909 EZRP15311 586 aaKnown RBP3.67□□□□□ -1.82
HTT-210ENST00000512909 PSMC3P17980 439 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 PRKACGP22612 351 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 CCNE1P24864 410 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 GIFP27352 417 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 RBMS1P29558 406 aaKnown RBP3.67□□□□□ -1.82
HTT-210ENST00000512909 HOXA9P31269 272 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 TIA1P31483 386 aaKnown RBP eCLIP3.67□□□□□ -1.82
HTT-210ENST00000512909 CCR2P41597 374 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 GCLMP48507 274 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 AP3M2P53677 418 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 XGP55808 180 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 STX17P56962 302 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 ERVK11-1P61568 191 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 SLC3A1Q07837 685 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 SMARCB1Q12824 385 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 HTR4Q13639 388 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 MLF2Q15773 248 aaPredicted RBP3.67□□□□□ -1.82
HTT-210ENST00000512909 TYSND1Q2T9J0 566 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 ZNF699Q32M78 642 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 ADAM5Q6NVV9 412 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 ALKBH5Q6P6C2 394 aaKnown RBP3.67□□□□□ -1.82
HTT-210ENST00000512909 BHLHB9Q6PI77 547 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 SLC25A47Q6Q0C1 308 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 RFPL4BQ6ZWI9 263 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 KCTD9Q7L273 389 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 ACOT1Q86TX2 421 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 WDR49Q8IV35 697 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 LRRC52Q8N7C0 313 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 TMEM105Q8N8V8 129 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 LEMD2Q8NC56 503 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 PRSS33Q8NF86 280 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 C2orf15Q8WU43 125 aaKnown RBP3.67□□□□□ -1.82
HTT-210ENST00000512909 TMEM190Q8WZ59 177 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 FAM3CQ92520 227 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 SMARCD2Q92925 531 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 SYAP1Q96A49 352 aaPredicted RBP3.67□□□□□ -1.82
HTT-210ENST00000512909 ELSPBP1Q96BH3 223 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 ULK4Q96C45 1275 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 OMA1Q96E52 524 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 RBM41Q96IZ5 413 aaKnown RBP3.67□□□□□ -1.82
HTT-210ENST00000512909 THAP2Q9H0W7 228 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 RSPH9Q9H1X1 276 aaPredicted RBP3.67□□□□□ -1.82
HTT-210ENST00000512909 ZNF696Q9H7X3 374 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 RNPEPL1Q9HAU8 725 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 PLCXD1Q9NUJ7 323 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 TEX10Q9NXF1 929 aaPredicted RBP3.67□□□□□ -1.82
HTT-210ENST00000512909 CGNQ9P2M7 1197 aaKnown RBP3.67□□□□□ -1.82
HTT-210ENST00000512909 UXTQ9UBK9 157 aaPredicted RBP3.67□□□□□ -1.82
HTT-210ENST00000512909 FBXL4Q9UKA2 621 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 POMT2Q9UKY4 750 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 CDH9Q9ULB4 789 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 DUSP12Q9UNI6 340 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 DNAH12Q6ZR08 3092 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 COL4A4P53420 1690 aaPredicted RBP3.67□□□□□ -1.82
HTT-210ENST00000512909 ATP8B3O60423 1300 aa3.67□□□□□ -1.82
HTT-210ENST00000512909 LOXHD1Q8IVV2 1947 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 TRAV19A0A0A6YYK7 116 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 CCDC162PA2VCL2 907 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 C15orf61A6NNL5 157 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 F8VP50 259 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 CCL24O00175 119 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 CACNB4O00305 520 aaPredicted RBP3.66□□□□□ -1.82
HTT-210ENST00000512909 SURF4O15260 269 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 TTI1O43156 1089 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms