RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 COMMD4Q9H0A8 199 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 C11orf16Q9NQ32 467 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 UBQLN4Q9NRR5 601 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 GALNT8Q9NY28 637 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 RPH3AQ9Y2J0 694 aaPredicted RBP4.82□□□□□ -1.64
PHF3-210ENST00000509876 ZNF646O15015 1829 aaPredicted RBP4.82□□□□□ -1.64
PHF3-210ENST00000509876 SMIM31A0A1B0GVY4 71 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 SERPINA3P01011 423 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 SDC1P18827 310 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 MAOAP21397 527 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 GABRB3P28472 473 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 BLVRAP53004 296 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 CSNK2BP67870 215 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 CRB2Q5IJ48 1285 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 UBAP2Q5T6F2 1119 aaKnown RBP4.82□□□□□ -1.64
PHF3-210ENST00000509876 TMPPEQ6ZT21 453 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 RPS19BP1Q86WX3 136 aaKnown RBP4.82□□□□□ -1.64
PHF3-210ENST00000509876 LIX1LQ8IVB5 337 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 NAGSQ8N159 534 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 STT3BQ8TCJ2 826 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 RORBQ92753 470 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 CENPNQ96H22 339 aaPredicted RBP4.82□□□□□ -1.64
PHF3-210ENST00000509876 PIGQQ9BRB3 760 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 GPR87Q9BY21 358 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 TRIM4Q9C037 500 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 ZNF395Q9H8N7 513 aaPredicted RBP4.82□□□□□ -1.64
PHF3-210ENST00000509876 PCDHGB1Q9Y5G3 927 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 OR7A17O14581 309 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 TAPBPO15533 448 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 ATP6V1G2O95670 118 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 CRYABP02511 175 aaKnown RBP4.82□□□□□ -1.64
PHF3-210ENST00000509876 TALDO1P37837 337 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 MAGEA8P43361 318 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 RPS26P62854 115 aaKnown RBP4.82□□□□□ -1.64
PHF3-210ENST00000509876 HMBOX1Q6NT76 420 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 BLOC1S3Q6QNY0 202 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 CARM1Q86X55 608 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 FAM86B1Q8N7N1 296 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 OR9I1Q8NGQ6 314 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 SGTBQ96EQ0 304 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 SGPP1Q9BX95 441 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 FOLH1BQ9HBA9 442 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 COQ3Q9NZJ6 369 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 EMC9Q9Y3B6 208 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 MYO16Q9Y6X6 1858 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 UNC119BA6NIH7 251 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 PRRG2O14669 202 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 ZGLP1P0C6A0 271 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 ARNTP27540 789 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 GNALP38405 381 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 FASLGP48023 281 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 SLC6A9P48067 706 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 MAN2A2P49641 1150 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 NRF1Q16656 503 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 TIMM50Q3ZCQ8 353 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 KHDC1Q4VXA5 237 aaKnown RBP4.82□□□□□ -1.64
PHF3-210ENST00000509876 GALNT5Q7Z7M9 940 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 AMIGO2Q86SJ2 522 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 ZNF540Q8NDQ6 660 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 CDS1Q92903 461 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 ASB9Q96DX5 294 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 HSPBAP1Q96EW2 488 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 OR5B2Q96R09 309 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 SLC6A16Q9GZN6 736 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 CHST8Q9H2A9 424 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 ZNF624Q9P2J8 865 aaPredicted RBP4.82□□□□□ -1.64
PHF3-210ENST00000509876 MYRFQ9Y2G1 1151 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 PCDHGA8Q9Y5G5 932 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 FAM149AA5PLN7 773 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 H0YC42 278 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 MEN1O00255 615 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 SNNO75324 88 aaPredicted RBP4.82□□□□□ -1.64
PHF3-210ENST00000509876 MT-ND5P03915 603 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 RNF144AP50876 292 aaPredicted RBP4.82□□□□□ -1.64
PHF3-210ENST00000509876 CORO7P57737 925 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 SSPNQ14714 243 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 AGERQ15109 404 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 FIP1L1Q6UN15 594 aaKnown RBP4.82□□□□□ -1.64
PHF3-210ENST00000509876 GRAMD2AQ8IUY3 354 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 LGI4Q8N135 537 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 CA13Q8N1Q1 262 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 DNAJA4Q8WW22 397 aaPredicted RBP4.82□□□□□ -1.64
PHF3-210ENST00000509876 DNASE2BQ8WZ79 361 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 ADOQ96SZ5 270 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 OSBPL11Q9BXB4 747 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 MBD1Q9UIS9 605 aaPredicted RBP4.82□□□□□ -1.64
PHF3-210ENST00000509876 MKLN1Q9UL63 735 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 TRIP11Q15643 1979 aa4.81□□□□□ -1.64
PHF3-210ENST00000509876 LRIT2A6NDA9 550 aa4.81□□□□□ -1.64
PHF3-210ENST00000509876 ANTXRLA6NF34 631 aa4.81□□□□□ -1.64
PHF3-210ENST00000509876 BCKDKO14874 412 aa4.81□□□□□ -1.64
PHF3-210ENST00000509876 ACOX3O15254 700 aa4.81□□□□□ -1.64
PHF3-210ENST00000509876 KIF1CO43896 1103 aaKnown RBP4.81□□□□□ -1.64
PHF3-210ENST00000509876 GREM1O60565 184 aa4.81□□□□□ -1.64
PHF3-210ENST00000509876 TACSTD2P09758 323 aa4.81□□□□□ -1.64
PHF3-210ENST00000509876 CCDC159P0C7I6 412 aa4.81□□□□□ -1.64
PHF3-210ENST00000509876 ANPEPP15144 967 aa4.81□□□□□ -1.64
PHF3-210ENST00000509876 MYL9P24844 172 aa4.81□□□□□ -1.64
PHF3-210ENST00000509876 GMPRP36959 345 aa4.81□□□□□ -1.64
PHF3-210ENST00000509876 GSK3BP49841 420 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms