RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 FRG2CA6NGY1 282 aa10.73□□□□□ -0.69
NUDCD3-211ENST00000497978 CD8B2A6NJW9 211 aa10.73□□□□□ -0.69
NUDCD3-211ENST00000497978 PCDH7O60245 1069 aa10.73□□□□□ -0.69
NUDCD3-211ENST00000497978 ICOSLGO75144 302 aa10.73□□□□□ -0.69
NUDCD3-211ENST00000497978 CTAG2O75638 210 aa10.73□□□□□ -0.69
NUDCD3-211ENST00000497978 CBR3O75828 277 aa10.73□□□□□ -0.69
NUDCD3-211ENST00000497978 CBX7O95931 251 aa10.73□□□□□ -0.69
NUDCD3-211ENST00000497978 ABHD2P08910 425 aa10.73□□□□□ -0.69
NUDCD3-211ENST00000497978 CYP4B1P13584 511 aa10.73□□□□□ -0.69
NUDCD3-211ENST00000497978 PCSK2P16519 638 aa10.73□□□□□ -0.69
NUDCD3-211ENST00000497978 IMPDH1P20839 514 aa10.73□□□□□ -0.69
NUDCD3-211ENST00000497978 ATP5F1P24539 256 aaPredicted RBP10.73□□□□□ -0.69
NUDCD3-211ENST00000497978 DNAJA1P31689 397 aaKnown RBP10.73□□□□□ -0.69
NUDCD3-211ENST00000497978 KRT20P35900 424 aa10.73□□□□□ -0.69
NUDCD3-211ENST00000497978 PSPHP78330 225 aa10.73□□□□□ -0.69
NUDCD3-211ENST00000497978 ACSM2AQ08AH3 577 aa10.73□□□□□ -0.69
NUDCD3-211ENST00000497978 HEPACAMQ14CZ8 416 aa10.73□□□□□ -0.69
NUDCD3-211ENST00000497978 ERCC6LQ2NKX8 1250 aa10.73□□□□□ -0.69
NUDCD3-211ENST00000497978 TRMT12Q53H54 448 aaKnown RBP10.73□□□□□ -0.69
NUDCD3-211ENST00000497978 UNC50Q53HI1 259 aa10.73□□□□□ -0.69
NUDCD3-211ENST00000497978 SPIN4Q56A73 249 aa10.73□□□□□ -0.69
NUDCD3-211ENST00000497978 ACSM2BQ68CK6 577 aa10.73□□□□□ -0.69
NUDCD3-211ENST00000497978 TRMT10CQ7L0Y3 403 aaKnown RBP10.73□□□□□ -0.69
NUDCD3-211ENST00000497978 YRDCQ86U90 279 aaKnown RBP10.73□□□□□ -0.69
NUDCD3-211ENST00000497978 KIF18BQ86Y91 864 aa10.73□□□□□ -0.69
NUDCD3-211ENST00000497978 GBP7Q8N8V2 638 aaPredicted RBP10.73□□□□□ -0.69
NUDCD3-211ENST00000497978 RELL2Q8NC24 303 aaPredicted RBP10.73□□□□□ -0.69
NUDCD3-211ENST00000497978 NAXEQ8NCW5 288 aa10.73□□□□□ -0.69
NUDCD3-211ENST00000497978 FAM83FQ8NEG4 500 aaPredicted RBP10.73□□□□□ -0.69
NUDCD3-211ENST00000497978 METTL6Q8TCB7 284 aa10.73□□□□□ -0.69
NUDCD3-211ENST00000497978 ZNF675Q8TD23 568 aa10.73□□□□□ -0.69
NUDCD3-211ENST00000497978 FAM222BQ8WU58 562 aa10.73□□□□□ -0.69
NUDCD3-211ENST00000497978 NINJ1Q92982 152 aa10.73□□□□□ -0.69
NUDCD3-211ENST00000497978 HGDQ93099 445 aa10.73□□□□□ -0.69
NUDCD3-211ENST00000497978 ERP27Q96DN0 273 aa10.73□□□□□ -0.69
NUDCD3-211ENST00000497978 CNRIP1Q96F85 164 aaPredicted RBP10.73□□□□□ -0.69
NUDCD3-211ENST00000497978 WDYHV1Q96HA8 205 aa10.73□□□□□ -0.69
NUDCD3-211ENST00000497978 ZNF681Q96N22 645 aa10.73□□□□□ -0.69
NUDCD3-211ENST00000497978 NODALQ96S42 347 aa10.73□□□□□ -0.69
NUDCD3-211ENST00000497978 TMEM216Q9P0N5 145 aa10.73□□□□□ -0.69
NUDCD3-211ENST00000497978 FETUBQ9UGM5 382 aa10.73□□□□□ -0.69
NUDCD3-211ENST00000497978 ZNF225Q9UK10 706 aa10.73□□□□□ -0.69
NUDCD3-211ENST00000497978 DLGAP4Q9Y2H0 992 aa10.73□□□□□ -0.69
NUDCD3-211ENST00000497978 CSMD2Q7Z408 3487 aa10.73□□□□□ -0.69
NUDCD3-211ENST00000497978 MED13LQ71F56 2210 aa10.72□□□□□ -0.69
NUDCD3-211ENST00000497978 PRAMEF25A6NGN4 478 aa10.72□□□□□ -0.69
NUDCD3-211ENST00000497978 TO15178 435 aa10.72□□□□□ -0.69
NUDCD3-211ENST00000497978 DLX3O60479 287 aa10.72□□□□□ -0.69
NUDCD3-211ENST00000497978 UGT2B11O75310 529 aa10.72□□□□□ -0.69
NUDCD3-211ENST00000497978 REM1O75628 298 aa10.72□□□□□ -0.69
NUDCD3-211ENST00000497978 ENO1P06733 434 aaKnown RBP10.72□□□□□ -0.69
NUDCD3-211ENST00000497978 IL3P08700 152 aa10.72□□□□□ -0.69
NUDCD3-211ENST00000497978 CTSSP25774 331 aa10.72□□□□□ -0.69
NUDCD3-211ENST00000497978 OPRM1P35372 400 aa10.72□□□□□ -0.69
NUDCD3-211ENST00000497978 EMDP50402 254 aa10.72□□□□□ -0.69
NUDCD3-211ENST00000497978 NAGLUP54802 743 aa10.72□□□□□ -0.69
NUDCD3-211ENST00000497978 PKNOX1P55347 436 aa10.72□□□□□ -0.69
NUDCD3-211ENST00000497978 WNT3P56703 355 aa10.72□□□□□ -0.69
NUDCD3-211ENST00000497978 MRPS35P82673 323 aaKnown RBP10.72□□□□□ -0.69
NUDCD3-211ENST00000497978 SNTB1Q13884 538 aaKnown RBP10.72□□□□□ -0.69
NUDCD3-211ENST00000497978 LTB4RQ15722 352 aa10.72□□□□□ -0.69
NUDCD3-211ENST00000497978 FBXL19-AS1Q494R0 122 aa10.72□□□□□ -0.69
NUDCD3-211ENST00000497978 FLYWCH1Q4VC44 716 aa10.72□□□□□ -0.69
NUDCD3-211ENST00000497978 TCHHL1Q5QJ38 904 aaPredicted RBP10.72□□□□□ -0.69
NUDCD3-211ENST00000497978 FAM180BQ6P0A1 224 aa10.72□□□□□ -0.69
NUDCD3-211ENST00000497978 ENPP6Q6UWR7 440 aa10.72□□□□□ -0.69
NUDCD3-211ENST00000497978 IFT20Q8IY31 132 aa10.72□□□□□ -0.69
NUDCD3-211ENST00000497978 CCDC116Q8IYX3 515 aa10.72□□□□□ -0.69
NUDCD3-211ENST00000497978 OR14L1PQ8NHC6 308 aa10.72□□□□□ -0.69
NUDCD3-211ENST00000497978 GOT1L1Q8NHS2 421 aaPredicted RBP10.72□□□□□ -0.69
NUDCD3-211ENST00000497978 ZPLD1Q8TCW7 415 aa10.72□□□□□ -0.69
NUDCD3-211ENST00000497978 EXOSC8Q96B26 276 aaKnown RBP10.72□□□□□ -0.69
NUDCD3-211ENST00000497978 NTNG2Q96CW9 530 aa10.72□□□□□ -0.69
NUDCD3-211ENST00000497978 RMND5BQ96G75 393 aaPredicted RBP10.72□□□□□ -0.69
NUDCD3-211ENST00000497978 COL21A1Q96P44 957 aa10.72□□□□□ -0.69
NUDCD3-211ENST00000497978 TMEM237Q96Q45 408 aa10.72□□□□□ -0.69
NUDCD3-211ENST00000497978 SH3GL2Q99962 352 aa10.72□□□□□ -0.69
NUDCD3-211ENST00000497978 GPATCH1Q9BRR8 931 aaKnown RBP10.72□□□□□ -0.69
NUDCD3-211ENST00000497978 SHCBP1LQ9BZQ2 653 aa10.72□□□□□ -0.69
NUDCD3-211ENST00000497978 CLEC4MQ9H2X3 399 aaPredicted RBP10.72□□□□□ -0.69
NUDCD3-211ENST00000497978 EPB41L4BQ9H329 900 aa10.72□□□□□ -0.69
NUDCD3-211ENST00000497978 GALNT9Q9HCQ5 603 aa10.72□□□□□ -0.69
NUDCD3-211ENST00000497978 SERHLQ9NQF3 203 aa10.72□□□□□ -0.69
NUDCD3-211ENST00000497978 EHD3Q9NZN3 535 aa10.72□□□□□ -0.69
NUDCD3-211ENST00000497978 CRIM1Q9NZV1 1036 aa10.72□□□□□ -0.69
NUDCD3-211ENST00000497978 SENP1Q9P0U3 644 aa10.72□□□□□ -0.69
NUDCD3-211ENST00000497978 HEY2Q9UBP5 337 aa10.72□□□□□ -0.69
NUDCD3-211ENST00000497978 MAPRE3Q9UPY8 281 aa10.72□□□□□ -0.69
NUDCD3-211ENST00000497978 EXO1Q9UQ84 846 aaKnown RBP10.72□□□□□ -0.69
NUDCD3-211ENST00000497978 GPR55Q9Y2T6 319 aaPredicted RBP10.72□□□□□ -0.69
NUDCD3-211ENST00000497978 MBD3L4A6NDZ8 208 aaPredicted RBP10.71□□□□□ -0.69
NUDCD3-211ENST00000497978 MBD3L3A6NE82 208 aaPredicted RBP10.71□□□□□ -0.69
NUDCD3-211ENST00000497978 TUBAL3A6NHL2 446 aa10.71□□□□□ -0.69
NUDCD3-211ENST00000497978 OR6C70A6NIJ9 312 aa10.71□□□□□ -0.69
NUDCD3-211ENST00000497978 MBD3L5A6NJ08 208 aaPredicted RBP10.71□□□□□ -0.69
NUDCD3-211ENST00000497978 A6NNC1 897 aa10.71□□□□□ -0.69
NUDCD3-211ENST00000497978 KDM4EB2RXH2 506 aaPredicted RBP10.71□□□□□ -0.69
NUDCD3-211ENST00000497978 H0Y3Z8 333 aa10.71□□□□□ -0.69
NUDCD3-211ENST00000497978 KIF2AO00139 706 aaPredicted RBP10.71□□□□□ -0.69
NUDCD3-211ENST00000497978 IL18BPO95998 194 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms