RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 UGT1A6P19224 532 aa3.68□□□□□ -1.82
NCKAP1-208ENST00000495619 RPA1P27694 616 aa3.68□□□□□ -1.82
NCKAP1-208ENST00000495619 SAA4P35542 130 aa3.68□□□□□ -1.82
NCKAP1-208ENST00000495619 NSFP46459 744 aaKnown RBP3.68□□□□□ -1.82
NCKAP1-208ENST00000495619 GPAT3Q53EU6 434 aa3.68□□□□□ -1.82
NCKAP1-208ENST00000495619 C9orf129Q5T035 196 aaKnown RBP3.68□□□□□ -1.82
NCKAP1-208ENST00000495619 PLBD1Q6P4A8 553 aa3.68□□□□□ -1.82
NCKAP1-208ENST00000495619 Q6ZVH6 145 aa3.68□□□□□ -1.82
NCKAP1-208ENST00000495619 FBXO16Q8IX29 292 aaPredicted RBP3.68□□□□□ -1.82
NCKAP1-208ENST00000495619 GPR137CQ8N3F9 429 aa3.68□□□□□ -1.82
NCKAP1-208ENST00000495619 OR13F1Q8NGS4 319 aa3.68□□□□□ -1.82
NCKAP1-208ENST00000495619 U2AF1L4Q8WU68 220 aaKnown RBP3.68□□□□□ -1.82
NCKAP1-208ENST00000495619 P3H4Q92791 437 aa3.68□□□□□ -1.82
NCKAP1-208ENST00000495619 ATP6V0A1Q93050 837 aa3.68□□□□□ -1.82
NCKAP1-208ENST00000495619 RAB39BQ96DA2 213 aa3.68□□□□□ -1.82
NCKAP1-208ENST00000495619 NAP1L3Q99457 506 aaPredicted RBP3.68□□□□□ -1.82
NCKAP1-208ENST00000495619 KIR2DL4Q99706 377 aa3.68□□□□□ -1.82
NCKAP1-208ENST00000495619 TRPV6Q9H1D0 765 aa3.68□□□□□ -1.82
NCKAP1-208ENST00000495619 NRN1Q9NPD7 142 aa3.68□□□□□ -1.82
NCKAP1-208ENST00000495619 KLRF1Q9NZS2 232 aa3.68□□□□□ -1.82
NCKAP1-208ENST00000495619 TRMT6Q9UJA5 497 aaKnown RBP3.68□□□□□ -1.82
NCKAP1-208ENST00000495619 KNSTRNQ9Y448 316 aa3.68□□□□□ -1.82
NCKAP1-208ENST00000495619 KLF2Q9Y5W3 355 aaPredicted RBP3.68□□□□□ -1.82
NCKAP1-208ENST00000495619 ABCC9O60706 1549 aa3.68□□□□□ -1.82
NCKAP1-208ENST00000495619 TRBV2A0A0J9YWF9 115 aa3.67□□□□□ -1.82
NCKAP1-208ENST00000495619 DDX39AO00148 427 aaKnown RBP3.67□□□□□ -1.82
NCKAP1-208ENST00000495619 TLR4O00206 839 aa3.67□□□□□ -1.82
NCKAP1-208ENST00000495619 ARPC1BO15143 372 aaKnown RBP3.67□□□□□ -1.82
NCKAP1-208ENST00000495619 CT45A10P0DMU9 189 aa3.67□□□□□ -1.82
NCKAP1-208ENST00000495619 VDRP11473 427 aa3.67□□□□□ -1.82
NCKAP1-208ENST00000495619 AREGP15514 252 aa3.67□□□□□ -1.82
NCKAP1-208ENST00000495619 ZNF18P17022 549 aa3.67□□□□□ -1.82
NCKAP1-208ENST00000495619 CALRP27797 417 aaKnown RBP3.67□□□□□ -1.82
NCKAP1-208ENST00000495619 RIPK4P57078 832 aa3.67□□□□□ -1.82
NCKAP1-208ENST00000495619 CCZ1BP86790 482 aa3.67□□□□□ -1.82
NCKAP1-208ENST00000495619 CCZ1P86791 482 aaPredicted RBP3.67□□□□□ -1.82
NCKAP1-208ENST00000495619 NKAIN2Q5VXU1 208 aa3.67□□□□□ -1.82
NCKAP1-208ENST00000495619 TOM1L2Q6ZVM7 507 aa3.67□□□□□ -1.82
NCKAP1-208ENST00000495619 RFESDQ8TAC1 157 aa3.67□□□□□ -1.82
NCKAP1-208ENST00000495619 ZNF560Q96MR9 790 aa3.67□□□□□ -1.82
NCKAP1-208ENST00000495619 SDHCQ99643 169 aaPredicted RBP3.67□□□□□ -1.82
NCKAP1-208ENST00000495619 JPH2Q9BR39 696 aaPredicted RBP3.67□□□□□ -1.82
NCKAP1-208ENST00000495619 NARFQ9UHQ1 456 aa3.67□□□□□ -1.82
NCKAP1-208ENST00000495619 ABCG2Q9UNQ0 655 aa3.67□□□□□ -1.82
NCKAP1-208ENST00000495619 ENTPD4Q9Y227 616 aa3.67□□□□□ -1.82
NCKAP1-208ENST00000495619 TDRKHQ9Y2W6 561 aaKnown RBP3.67□□□□□ -1.82
NCKAP1-208ENST00000495619 MFSD2BA6NFX1 497 aa3.66□□□□□ -1.82
NCKAP1-208ENST00000495619 OAS1P00973 400 aaKnown RBP3.66□□□□□ -1.82
NCKAP1-208ENST00000495619 CD1EP15812 388 aa3.66□□□□□ -1.82
NCKAP1-208ENST00000495619 PTPN4P29074 926 aa3.66□□□□□ -1.82
NCKAP1-208ENST00000495619 WNT4P56705 351 aa3.66□□□□□ -1.82
NCKAP1-208ENST00000495619 STX17P56962 302 aa3.66□□□□□ -1.82
NCKAP1-208ENST00000495619 CBX3Q13185 183 aa3.66□□□□□ -1.82
NCKAP1-208ENST00000495619 SMC1AQ14683 1233 aaKnown RBP3.66□□□□□ -1.82
NCKAP1-208ENST00000495619 LCE3AQ5TA76 89 aa3.66□□□□□ -1.82
NCKAP1-208ENST00000495619 SEL1L2Q5TEA6 688 aa3.66□□□□□ -1.82
NCKAP1-208ENST00000495619 DLEU7Q6UYE1 221 aa3.66□□□□□ -1.82
NCKAP1-208ENST00000495619 TSEN54Q7Z6J9 526 aaKnown RBP3.66□□□□□ -1.82
NCKAP1-208ENST00000495619 RANBP3LQ86VV4 465 aaPredicted RBP3.66□□□□□ -1.82
NCKAP1-208ENST00000495619 PEX5LQ8IYB4 626 aa3.66□□□□□ -1.82
NCKAP1-208ENST00000495619 OR52J3Q8NH60 311 aa3.66□□□□□ -1.82
NCKAP1-208ENST00000495619 CCDC26Q8TAB7 109 aa3.66□□□□□ -1.82
NCKAP1-208ENST00000495619 SETD7Q8WTS6 366 aaKnown RBP3.66□□□□□ -1.82
NCKAP1-208ENST00000495619 NUS1Q96E22 293 aa3.66□□□□□ -1.82
NCKAP1-208ENST00000495619 TSPY26PQ9H489 355 aa3.66□□□□□ -1.82
NCKAP1-208ENST00000495619 IKZF5Q9H5V7 419 aa3.66□□□□□ -1.82
NCKAP1-208ENST00000495619 AKAP7Q9P0M2 348 aaPredicted RBP3.66□□□□□ -1.82
NCKAP1-208ENST00000495619 APOBEC3BQ9UH17 382 aaKnown RBP3.66□□□□□ -1.82
NCKAP1-208ENST00000495619 SPAG9O60271 1321 aaKnown RBP3.66□□□□□ -1.82
NCKAP1-208ENST00000495619 A0A0J9YVX5 310 aa3.65□□□□□ -1.83
NCKAP1-208ENST00000495619 MACROD2A1Z1Q3 448 aa3.65□□□□□ -1.83
NCKAP1-208ENST00000495619 SLC9B1P1A6NJY1 282 aa3.65□□□□□ -1.83
NCKAP1-208ENST00000495619 ZFP92A6NM28 416 aa3.65□□□□□ -1.83
NCKAP1-208ENST00000495619 SERF1AO75920 110 aa3.65□□□□□ -1.83
NCKAP1-208ENST00000495619 NT5C2P49902 561 aa3.65□□□□□ -1.83
NCKAP1-208ENST00000495619 UBXN1Q04323 297 aa3.65□□□□□ -1.83
NCKAP1-208ENST00000495619 AP1B1Q10567 949 aa3.65□□□□□ -1.83
NCKAP1-208ENST00000495619 ZIC1Q15915 447 aa3.65□□□□□ -1.83
NCKAP1-208ENST00000495619 PRAMEF7Q5VXH5 474 aa3.65□□□□□ -1.83
NCKAP1-208ENST00000495619 MEDAGQ5VYS4 303 aa3.65□□□□□ -1.83
NCKAP1-208ENST00000495619 ATRAIDQ6UW56 229 aa3.65□□□□□ -1.83
NCKAP1-208ENST00000495619 RABEPKQ7Z6M1 372 aa3.65□□□□□ -1.83
NCKAP1-208ENST00000495619 SLC22A16Q86VW1 577 aa3.65□□□□□ -1.83
NCKAP1-208ENST00000495619 UNC5CLQ8IV45 518 aa3.65□□□□□ -1.83
NCKAP1-208ENST00000495619 C14orf178Q8N769 122 aaPredicted RBP3.65□□□□□ -1.83
NCKAP1-208ENST00000495619 DTD2Q96FN9 168 aa3.65□□□□□ -1.83
NCKAP1-208ENST00000495619 ACAT2Q9BWD1 397 aa3.65□□□□□ -1.83
NCKAP1-208ENST00000495619 TEX13AQ9BXU3 409 aaPredicted RBP3.65□□□□□ -1.83
NCKAP1-208ENST00000495619 ABCG4Q9H172 646 aa3.65□□□□□ -1.83
NCKAP1-208ENST00000495619 FLVCR1Q9Y5Y0 555 aa3.65□□□□□ -1.83
NCKAP1-208ENST00000495619 NPC1L1Q9UHC9 1359 aa3.64□□□□□ -1.83
NCKAP1-208ENST00000495619 IGLV8-61A0A075B6I0 122 aa3.64□□□□□ -1.83
NCKAP1-208ENST00000495619 TRIM64A6NGJ6 449 aa3.64□□□□□ -1.83
NCKAP1-208ENST00000495619 TRIM64BA6NI03 449 aa3.64□□□□□ -1.83
NCKAP1-208ENST00000495619 NUDT21O43809 227 aaKnown RBP3.64□□□□□ -1.83
NCKAP1-208ENST00000495619 ABHD2P08910 425 aa3.64□□□□□ -1.83
NCKAP1-208ENST00000495619 ELK1P19419 428 aa3.64□□□□□ -1.83
NCKAP1-208ENST00000495619 IGFBP5P24593 272 aa3.64□□□□□ -1.83
NCKAP1-208ENST00000495619 MAT2AP31153 395 aaKnown RBP3.64□□□□□ -1.83
NCKAP1-208ENST00000495619 HNRNPFP52597 415 aaKnown RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms