RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 JRKO75564 520 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 SNAP29O95721 258 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 ITGA2P17301 1181 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 MAOAP21397 527 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 OR1D4P47884 311 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 DUSP3P51452 185 aaPredicted RBP8.81□□□□□ -1
SF3B1-211ENST00000487698 DAB2P98082 770 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 ACY1Q03154 408 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 STX4Q12846 297 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 MERTKQ12866 999 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 GK3PQ14409 553 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 ARHGAP11BQ3KRB8 267 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 GPAT3Q53EU6 434 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 ATAD3BQ5T9A4 648 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 C16orf62Q7Z3J2 963 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 COMTD1Q86VU5 262 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 SLITRK4Q8IW52 837 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 CDRT4Q8N9R6 151 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 RCBTB1Q8NDN9 531 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 DOK4Q8TEW6 326 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 ZNF354BQ96LW1 612 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 STACQ99469 402 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 SPATA5L1Q9BVQ7 753 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 REEP1Q9H902 201 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 SMURF2Q9HAU4 748 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 EXD2Q9NVH0 621 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 TMEFF2Q9UIK5 374 aaPredicted RBP8.81□□□□□ -1
SF3B1-211ENST00000487698 KCND3Q9UK17 655 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 SATB2Q9UPW6 733 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 SAMHD1Q9Y3Z3 626 aaKnown RBP8.81□□□□□ -1
SF3B1-211ENST00000487698 MMACHCQ9Y4U1 282 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 PCDHGB5Q9Y5G0 923 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 PCDHGB2Q9Y5G2 931 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 LYVE1Q9Y5Y7 322 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 OR2W5A6NFC9 320 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 A8MVJ9 347 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 D6RAR5 112 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 KHNYNO15037 678 aaKnown RBP8.8□□□□□ -1
SF3B1-211ENST00000487698 ADAMDEC1O15204 470 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 EPPINO95925 133 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 IFNW1P05000 195 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 LYNP07948 512 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 THRBP10828 461 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 ALAS2P22557 587 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 PRKACGP22612 351 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 RRM2P31350 389 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 GALNSP34059 522 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 LIMS1P48059 325 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 PDX1P52945 283 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 ADARB1P78563 741 aaKnown RBP8.8□□□□□ -1
SF3B1-211ENST00000487698 BIKQ13323 160 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 BLMHQ13867 455 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 ANKRD34AQ69YU3 496 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 RHBDD2Q6NTF9 364 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 FRRS1Q6ZNA5 592 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 USP51Q70EK9 711 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 CHDHQ8NE62 594 aaPredicted RBP8.8□□□□□ -1
SF3B1-211ENST00000487698 OR4C15Q8NGM1 316 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 SLC9A6Q92581 669 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 PROX1Q92786 737 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 CNBD2Q96M20 576 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 PELOQ9BRX2 385 aaKnown RBP8.8□□□□□ -1
SF3B1-211ENST00000487698 ZNF304Q9HCX3 659 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 NECTIN3Q9NQS3 549 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 NDOR1Q9UHB4 597 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 SRPK3Q9UPE1 567 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 PCDHGB3Q9Y5G1 929 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 LNP1A1A4G5 178 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 MAGEA13PA6NCF6 341 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 H0YAE9 185 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 GALR2O43603 387 aaPredicted RBP8.8□□□□□ -1
SF3B1-211ENST00000487698 FCMRO60667 390 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 COQ9O75208 318 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 SEMA7AO75326 666 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 GNAO1P09471 354 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 ALOX5P09917 674 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 PABPC4LP0CB38 370 aaKnown RBP8.8□□□□□ -1
SF3B1-211ENST00000487698 UBTFL6P0CB48 400 aaPredicted RBP8.8□□□□□ -1
SF3B1-211ENST00000487698 RHCEP18577 417 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 FBLP22087 321 aaKnown RBP8.8□□□□□ -1
SF3B1-211ENST00000487698 MYF6P23409 242 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 CAPGP40121 348 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 GRK6P43250 576 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 EMDP50402 254 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 CHN2P52757 468 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 EFNA3P52797 238 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 CHRNEQ04844 493 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 SERTAD2Q14140 314 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 LAPTM4AQ15012 233 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 MLIPQ5VWP3 458 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 AP1ARQ63HQ0 302 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 TYW3Q6IPR3 259 aaKnown RBP8.8□□□□□ -1
SF3B1-211ENST00000487698 FAHD1Q6P587 224 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 QSOX2Q6ZRP7 698 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 DHRSXQ8N5I4 330 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 OR52R1Q8NGF1 315 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 OR4D11Q8NGI4 311 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 RIT1Q92963 219 aa8.8□□□□□ -1
SF3B1-211ENST00000487698 RBM18Q96H35 190 aaKnown RBP8.8□□□□□ -1
SF3B1-211ENST00000487698 ZNF578Q96N58 590 aaPredicted RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms