RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 DCAF7P61962 342 aa11.11□□□□□ -0.63
VPS16-208ENST00000487461 RAE1P78406 368 aaKnown RBP11.11□□□□□ -0.63
VPS16-208ENST00000487461 MRPS35P82673 323 aaKnown RBP11.11□□□□□ -0.63
VPS16-208ENST00000487461 PLCXD2Q0VAA5 305 aa11.11□□□□□ -0.63
VPS16-208ENST00000487461 SNTA1Q13424 505 aa11.11□□□□□ -0.63
VPS16-208ENST00000487461 DAZAP2Q15038 168 aaPredicted RBP11.11□□□□□ -0.63
VPS16-208ENST00000487461 FLYWCH1Q4VC44 716 aa11.11□□□□□ -0.63
VPS16-208ENST00000487461 TIFABQ6ZNK6 161 aa11.11□□□□□ -0.63
VPS16-208ENST00000487461 CDYL2Q8N8U2 506 aa11.11□□□□□ -0.63
VPS16-208ENST00000487461 C9orf106Q8NAJ2 232 aa11.11□□□□□ -0.63
VPS16-208ENST00000487461 MBD3L2Q8NHZ7 208 aaPredicted RBP11.11□□□□□ -0.63
VPS16-208ENST00000487461 RDH11Q8TC12 318 aa11.11□□□□□ -0.63
VPS16-208ENST00000487461 ZPLD1Q8TCW7 415 aa11.11□□□□□ -0.63
VPS16-208ENST00000487461 TMBIM1Q969X1 311 aa11.11□□□□□ -0.63
VPS16-208ENST00000487461 LRRC46Q96FV0 321 aa11.11□□□□□ -0.63
VPS16-208ENST00000487461 C16orf45Q96MC5 204 aaPredicted RBP11.11□□□□□ -0.63
VPS16-208ENST00000487461 TMUB1Q9BVT8 246 aa11.11□□□□□ -0.63
VPS16-208ENST00000487461 OSBPL11Q9BXB4 747 aa11.11□□□□□ -0.63
VPS16-208ENST00000487461 ANKRA2Q9H9E1 313 aa11.11□□□□□ -0.63
VPS16-208ENST00000487461 SERHLQ9NQF3 203 aa11.11□□□□□ -0.63
VPS16-208ENST00000487461 PRODH2Q9UF12 536 aa11.11□□□□□ -0.63
VPS16-208ENST00000487461 FOXD3Q9UJU5 478 aaPredicted RBP11.11□□□□□ -0.63
VPS16-208ENST00000487461 CBLCQ9ULV8 474 aa11.11□□□□□ -0.63
VPS16-208ENST00000487461 MAPRE3Q9UPY8 281 aa11.11□□□□□ -0.63
VPS16-208ENST00000487461 EXO1Q9UQ84 846 aaKnown RBP11.11□□□□□ -0.63
VPS16-208ENST00000487461 DLGAP4Q9Y2H0 992 aa11.11□□□□□ -0.63
VPS16-208ENST00000487461 GPR55Q9Y2T6 319 aaPredicted RBP11.11□□□□□ -0.63
VPS16-208ENST00000487461 ABCA4P78363 2273 aa11.11□□□□□ -0.63
VPS16-208ENST00000487461 PRAMEF25A6NGN4 478 aa11.1□□□□□ -0.63
VPS16-208ENST00000487461 CBR3O75828 277 aa11.1□□□□□ -0.63
VPS16-208ENST00000487461 SUPT7LO94864 414 aa11.1□□□□□ -0.63
VPS16-208ENST00000487461 ESRRBO95718 433 aa11.1□□□□□ -0.63
VPS16-208ENST00000487461 KRT6AP02538 564 aa11.1□□□□□ -0.63
VPS16-208ENST00000487461 KRT6BP04259 564 aa11.1□□□□□ -0.63
VPS16-208ENST00000487461 RHOXF2BP0C7M4 288 aa11.1□□□□□ -0.63
VPS16-208ENST00000487461 CTAGE8P0CG41 777 aa11.1□□□□□ -0.63
VPS16-208ENST00000487461 CPN1P15169 458 aa11.1□□□□□ -0.63
VPS16-208ENST00000487461 TAC1P20366 129 aa11.1□□□□□ -0.63
VPS16-208ENST00000487461 KRT6CP48668 564 aa11.1□□□□□ -0.63
VPS16-208ENST00000487461 HMGCS1Q01581 520 aa11.1□□□□□ -0.63
VPS16-208ENST00000487461 SRYQ05066 204 aa11.1□□□□□ -0.63
VPS16-208ENST00000487461 FOXF2Q12947 444 aa11.1□□□□□ -0.63
VPS16-208ENST00000487461 RASA2Q15283 850 aa11.1□□□□□ -0.63
VPS16-208ENST00000487461 ZNF628Q5EBL2 1059 aa11.1□□□□□ -0.63
VPS16-208ENST00000487461 ZNF678Q5SXM1 525 aa11.1□□□□□ -0.63
VPS16-208ENST00000487461 CDC20BQ86Y33 519 aa11.1□□□□□ -0.63
VPS16-208ENST00000487461 TRIM42Q8IWZ5 723 aa11.1□□□□□ -0.63
VPS16-208ENST00000487461 CTAGE4Q8IX94 777 aa11.1□□□□□ -0.63
VPS16-208ENST00000487461 LINC01560Q8TB33 94 aa11.1□□□□□ -0.63
VPS16-208ENST00000487461 ZNF675Q8TD23 568 aa11.1□□□□□ -0.63
VPS16-208ENST00000487461 KAT2AQ92830 837 aa11.1□□□□□ -0.63
VPS16-208ENST00000487461 TMEM237Q96Q45 408 aa11.1□□□□□ -0.63
VPS16-208ENST00000487461 TUBA1CQ9BQE3 449 aa11.1□□□□□ -0.63
VPS16-208ENST00000487461 ACPTQ9BZG2 426 aa11.1□□□□□ -0.63
VPS16-208ENST00000487461 OR2B2Q9GZK3 357 aa11.1□□□□□ -0.63
VPS16-208ENST00000487461 KLRF1Q9NZS2 232 aa11.1□□□□□ -0.63
VPS16-208ENST00000487461 JKAMPQ9P055 326 aa11.1□□□□□ -0.63
VPS16-208ENST00000487461 MCM8Q9UJA3 840 aa11.1□□□□□ -0.63
VPS16-208ENST00000487461 PLEKHA6Q9Y2H5 1048 aa11.1□□□□□ -0.63
VPS16-208ENST00000487461 EXOC1LA0A1B0GW35 172 aa11.09□□□□□ -0.63
VPS16-208ENST00000487461 FRG2CA6NGY1 282 aa11.09□□□□□ -0.63
VPS16-208ENST00000487461 TUBAL3A6NHL2 446 aa11.09□□□□□ -0.63
VPS16-208ENST00000487461 OR6C70A6NIJ9 312 aa11.09□□□□□ -0.63
VPS16-208ENST00000487461 DIAPH2O60879 1101 aa11.09□□□□□ -0.63
VPS16-208ENST00000487461 ULK1O75385 1050 aa11.09□□□□□ -0.63
VPS16-208ENST00000487461 REM1O75628 298 aa11.09□□□□□ -0.63
VPS16-208ENST00000487461 IL18BPO95998 194 aa11.09□□□□□ -0.63
VPS16-208ENST00000487461 IL3P08700 152 aa11.09□□□□□ -0.63
VPS16-208ENST00000487461 CT45A8P0DMV1 189 aa11.09□□□□□ -0.63
VPS16-208ENST00000487461 CT45A9P0DMV2 189 aa11.09□□□□□ -0.63
VPS16-208ENST00000487461 EPXP11678 715 aa11.09□□□□□ -0.63
VPS16-208ENST00000487461 CYP4B1P13584 511 aa11.09□□□□□ -0.63
VPS16-208ENST00000487461 HSD3B1P14060 373 aa11.09□□□□□ -0.63
VPS16-208ENST00000487461 CD99P14209 185 aa11.09□□□□□ -0.63
VPS16-208ENST00000487461 DRD2P14416 443 aa11.09□□□□□ -0.63
VPS16-208ENST00000487461 IMPDH1P20839 514 aa11.09□□□□□ -0.63
VPS16-208ENST00000487461 TACR1P25103 407 aa11.09□□□□□ -0.63
VPS16-208ENST00000487461 HSD3B2P26439 372 aa11.09□□□□□ -0.63
VPS16-208ENST00000487461 OPRM1P35372 400 aa11.09□□□□□ -0.63
VPS16-208ENST00000487461 STARP49675 285 aa11.09□□□□□ -0.63
VPS16-208ENST00000487461 HTR6P50406 440 aa11.09□□□□□ -0.63
VPS16-208ENST00000487461 PRKAA2P54646 552 aa11.09□□□□□ -0.63
VPS16-208ENST00000487461 CORO7P57737 925 aa11.09□□□□□ -0.63
VPS16-208ENST00000487461 CSTF3Q12996 717 aaKnown RBP11.09□□□□□ -0.63
VPS16-208ENST00000487461 RCAN2Q14206 197 aa11.09□□□□□ -0.63
VPS16-208ENST00000487461 CEBPEQ15744 281 aa11.09□□□□□ -0.63
VPS16-208ENST00000487461 GLE1Q53GS7 698 aaKnown RBP11.09□□□□□ -0.63
VPS16-208ENST00000487461 CT45A2Q5DJT8 189 aa11.09□□□□□ -0.63
VPS16-208ENST00000487461 LGSNQ5TDP6 509 aa11.09□□□□□ -0.63
VPS16-208ENST00000487461 PLXDC2Q6UX71 529 aa11.09□□□□□ -0.63
VPS16-208ENST00000487461 GPRIN3Q6ZVF9 776 aa11.09□□□□□ -0.63
VPS16-208ENST00000487461 OR9A2Q8NGT5 310 aa11.09□□□□□ -0.63
VPS16-208ENST00000487461 OR14L1PQ8NHC6 308 aa11.09□□□□□ -0.63
VPS16-208ENST00000487461 GOT1L1Q8NHS2 421 aaPredicted RBP11.09□□□□□ -0.63
VPS16-208ENST00000487461 METTL6Q8TCB7 284 aa11.09□□□□□ -0.63
VPS16-208ENST00000487461 C16orf78Q8WTQ4 265 aa11.09□□□□□ -0.63
VPS16-208ENST00000487461 ZNF592Q92610 1267 aa11.09□□□□□ -0.63
VPS16-208ENST00000487461 EXOSC8Q96B26 276 aaKnown RBP11.09□□□□□ -0.63
VPS16-208ENST00000487461 TMCO6Q96DC7 493 aa11.09□□□□□ -0.63
VPS16-208ENST00000487461 RMND5BQ96G75 393 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms