RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 FIG4Q92562 907 aa13.86□□□□□ -0.19
MCF2L-228ENST00000487354 PGM2Q96G03 612 aa13.86□□□□□ -0.19
MCF2L-228ENST00000487354 FAM111AQ96PZ2 611 aa13.86□□□□□ -0.19
MCF2L-228ENST00000487354 CENPKQ9BS16 269 aa13.86□□□□□ -0.19
MCF2L-228ENST00000487354 SNX12Q9UMY4 172 aa13.86□□□□□ -0.19
MCF2L-228ENST00000487354 POU2F1P14859 743 aa13.85□□□□□ -0.19
MCF2L-228ENST00000487354 KRT15P19012 456 aa13.85□□□□□ -0.19
MCF2L-228ENST00000487354 NT5EP21589 574 aa13.85□□□□□ -0.19
MCF2L-228ENST00000487354 SSTR1P30872 391 aa13.85□□□□□ -0.19
MCF2L-228ENST00000487354 GCKP35557 465 aa13.85□□□□□ -0.19
MCF2L-228ENST00000487354 XKP51811 444 aa13.85□□□□□ -0.19
MCF2L-228ENST00000487354 GAS1P54826 345 aa13.85□□□□□ -0.19
MCF2L-228ENST00000487354 NR1H2P55055 460 aa13.85□□□□□ -0.19
MCF2L-228ENST00000487354 LIPJQ5W064 366 aa13.85□□□□□ -0.19
MCF2L-228ENST00000487354 PLCZ1Q86YW0 608 aa13.85□□□□□ -0.19
MCF2L-228ENST00000487354 ZBED8Q8IZ13 594 aa13.85□□□□□ -0.19
MCF2L-228ENST00000487354 SLC35F6Q8N357 371 aa13.85□□□□□ -0.19
MCF2L-228ENST00000487354 MEIOBQ8N635 442 aa13.85□□□□□ -0.19
MCF2L-228ENST00000487354 CNEP1R1Q8N9A8 125 aa13.85□□□□□ -0.19
MCF2L-228ENST00000487354 MAPK1IP1LQ8NDC0 245 aa13.85□□□□□ -0.19
MCF2L-228ENST00000487354 OR4K14Q8NGD5 310 aa13.85□□□□□ -0.19
MCF2L-228ENST00000487354 STAG3L4Q8TBR4 150 aa13.85□□□□□ -0.19
MCF2L-228ENST00000487354 ZC3HAV1LQ96H79 300 aaKnown RBP13.85□□□□□ -0.19
MCF2L-228ENST00000487354 LCORQ96JN0 433 aaPredicted RBP13.85□□□□□ -0.19
MCF2L-228ENST00000487354 SFXN2Q96NB2 322 aa13.85□□□□□ -0.19
MCF2L-228ENST00000487354 WDR41Q9HAD4 459 aa13.85□□□□□ -0.19
MCF2L-228ENST00000487354 PRM3Q9NNZ6 103 aa13.85□□□□□ -0.19
MCF2L-228ENST00000487354 PSD3Q9NYI0 1048 aa13.85□□□□□ -0.19
MCF2L-228ENST00000487354 PLLPQ9Y342 182 aa13.85□□□□□ -0.19
MCF2L-228ENST00000487354 RNF11Q9Y3C5 154 aa13.85□□□□□ -0.19
MCF2L-228ENST00000487354 PCDHGA11Q9Y5H2 935 aa13.85□□□□□ -0.19
MCF2L-228ENST00000487354 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.84□□□□□ -0.19
MCF2L-228ENST00000487354 SLC22A20A6NK97 555 aa13.84□□□□□ -0.19
MCF2L-228ENST00000487354 FAM159BA6NKW6 160 aa13.84□□□□□ -0.19
MCF2L-228ENST00000487354 H0YC42 278 aa13.84□□□□□ -0.19
MCF2L-228ENST00000487354 TO15178 435 aa13.84□□□□□ -0.19
MCF2L-228ENST00000487354 ACOX3O15254 700 aa13.84□□□□□ -0.19
MCF2L-228ENST00000487354 KLF4O43474 513 aa13.84□□□□□ -0.19
MCF2L-228ENST00000487354 SEMA3DO95025 777 aa13.84□□□□□ -0.19
MCF2L-228ENST00000487354 PLAUP00749 431 aa13.84□□□□□ -0.19
MCF2L-228ENST00000487354 ATP1B1P05026 303 aa13.84□□□□□ -0.19
MCF2L-228ENST00000487354 TCEA1P23193 301 aaKnown RBP13.84□□□□□ -0.19
MCF2L-228ENST00000487354 PIK3CGP48736 1102 aa13.84□□□□□ -0.19
MCF2L-228ENST00000487354 EMDP50402 254 aa13.84□□□□□ -0.19
MCF2L-228ENST00000487354 TPD52P55327 224 aaPredicted RBP13.84□□□□□ -0.19
MCF2L-228ENST00000487354 GPX6P59796 221 aa13.84□□□□□ -0.19
MCF2L-228ENST00000487354 SIRPAP78324 504 aa13.84□□□□□ -0.19
MCF2L-228ENST00000487354 MAP4K2Q12851 820 aa13.84□□□□□ -0.19
MCF2L-228ENST00000487354 CPSF6Q16630 551 aaKnown RBP eCLIP13.84□□□□□ -0.19
MCF2L-228ENST00000487354 HEPHL1Q6MZM0 1159 aa13.84□□□□□ -0.19
MCF2L-228ENST00000487354 SCIMPQ6UWF3 145 aa13.84□□□□□ -0.19
MCF2L-228ENST00000487354 PLEKHM3Q6ZWE6 761 aa13.84□□□□□ -0.19
MCF2L-228ENST00000487354 MYLK4Q86YV6 388 aaPredicted RBP13.84□□□□□ -0.19
MCF2L-228ENST00000487354 CENPLQ8N0S6 344 aaPredicted RBP13.84□□□□□ -0.19
MCF2L-228ENST00000487354 L3MBTL4Q8NA19 623 aa13.84□□□□□ -0.19
MCF2L-228ENST00000487354 CPNE1Q99829 537 aa13.84□□□□□ -0.19
MCF2L-228ENST00000487354 ELOVL5Q9NYP7 299 aa13.84□□□□□ -0.19
MCF2L-228ENST00000487354 MRPS18CQ9Y3D5 142 aaKnown RBP13.84□□□□□ -0.19
MCF2L-228ENST00000487354 TCRBV9S1A1TA0A576 114 aa13.83□□□□□ -0.2
MCF2L-228ENST00000487354 RNF212BA8MTL3 300 aa13.83□□□□□ -0.2
MCF2L-228ENST00000487354 GOLGA6L6A8MZA4 724 aa13.83□□□□□ -0.2
MCF2L-228ENST00000487354 C16orf97H3BN30 126 aa13.83□□□□□ -0.2
MCF2L-228ENST00000487354 FOXE1O00358 373 aaPredicted RBP13.83□□□□□ -0.2
MCF2L-228ENST00000487354 EMC8O43402 210 aa13.83□□□□□ -0.2
MCF2L-228ENST00000487354 UGDHO60701 494 aa13.83□□□□□ -0.2
MCF2L-228ENST00000487354 NME6O75414 186 aaPredicted RBP13.83□□□□□ -0.2
MCF2L-228ENST00000487354 CTAGE8P0CG41 777 aa13.83□□□□□ -0.2
MCF2L-228ENST00000487354 CD8BP10966 210 aa13.83□□□□□ -0.2
MCF2L-228ENST00000487354 PORP16435 677 aaPredicted RBP13.83□□□□□ -0.2
MCF2L-228ENST00000487354 GP5P40197 560 aa13.83□□□□□ -0.2
MCF2L-228ENST00000487354 SUCLG1P53597 346 aaKnown RBP13.83□□□□□ -0.2
MCF2L-228ENST00000487354 DMTNQ08495 405 aa13.83□□□□□ -0.2
MCF2L-228ENST00000487354 ILF2Q12905 390 aaKnown RBP13.83□□□□□ -0.2
MCF2L-228ENST00000487354 LTB4RQ15722 352 aa13.83□□□□□ -0.2
MCF2L-228ENST00000487354 BCL2A1Q16548 175 aa13.83□□□□□ -0.2
MCF2L-228ENST00000487354 FAM219BQ5XKK7 198 aa13.83□□□□□ -0.2
MCF2L-228ENST00000487354 ANKRD34AQ69YU3 496 aa13.83□□□□□ -0.2
MCF2L-228ENST00000487354 OR5M10Q6IEU7 315 aa13.83□□□□□ -0.2
MCF2L-228ENST00000487354 AAGABQ6PD74 315 aa13.83□□□□□ -0.2
MCF2L-228ENST00000487354 CTAGE4Q8IX94 777 aa13.83□□□□□ -0.2
MCF2L-228ENST00000487354 ZNF610Q8N9Z0 462 aa13.83□□□□□ -0.2
MCF2L-228ENST00000487354 ADCY4Q8NFM4 1077 aa13.83□□□□□ -0.2
MCF2L-228ENST00000487354 CAVIN3Q969G5 261 aa13.83□□□□□ -0.2
MCF2L-228ENST00000487354 TMBIM1Q969X1 311 aa13.83□□□□□ -0.2
MCF2L-228ENST00000487354 SLC35A4Q96G79 324 aa13.83□□□□□ -0.2
MCF2L-228ENST00000487354 TMEM204Q9BSN7 226 aa13.83□□□□□ -0.2
MCF2L-228ENST00000487354 RNF122Q9H9V4 155 aa13.83□□□□□ -0.2
MCF2L-228ENST00000487354 YLPM1P49750 1951 aaKnown RBP13.83□□□□□ -0.2
MCF2L-228ENST00000487354 A0A087X1B8 175 aa13.82□□□□□ -0.2
MCF2L-228ENST00000487354 FRG2CA6NGY1 282 aa13.82□□□□□ -0.2
MCF2L-228ENST00000487354 OR6C70A6NIJ9 312 aa13.82□□□□□ -0.2
MCF2L-228ENST00000487354 TSPAN2O60636 221 aa13.82□□□□□ -0.2
MCF2L-228ENST00000487354 DRD5P21918 477 aa13.82□□□□□ -0.2
MCF2L-228ENST00000487354 IRF9Q00978 393 aa13.82□□□□□ -0.2
MCF2L-228ENST00000487354 DR1Q01658 176 aa13.82□□□□□ -0.2
MCF2L-228ENST00000487354 TRMT12Q53H54 448 aaKnown RBP13.82□□□□□ -0.2
MCF2L-228ENST00000487354 OR2A2Q6IF42 318 aa13.82□□□□□ -0.2
MCF2L-228ENST00000487354 HMBOX1Q6NT76 420 aa13.82□□□□□ -0.2
MCF2L-228ENST00000487354 FAM180BQ6P0A1 224 aa13.82□□□□□ -0.2
MCF2L-228ENST00000487354 SLC48A1Q6P1K1 146 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms