RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 MTNR1AP48039 350 aa23.15■■□□□ 1.3
SYNGAP1-206ENST00000479510 TAS2R41P59536 307 aa23.15■■□□□ 1.3
SYNGAP1-206ENST00000479510 HNRNPA0Q13151 305 aaKnown RBP23.15■■□□□ 1.3
SYNGAP1-206ENST00000479510 LASP1Q14847 261 aaKnown RBP23.15■■□□□ 1.3
SYNGAP1-206ENST00000479510 MLF2Q15773 248 aaPredicted RBP23.15■■□□□ 1.3
SYNGAP1-206ENST00000479510 GPAT3Q53EU6 434 aa23.15■■□□□ 1.3
SYNGAP1-206ENST00000479510 CD200R1LQ6Q8B3 271 aa23.15■■□□□ 1.3
SYNGAP1-206ENST00000479510 OR2L5Q8NG80 312 aa23.15■■□□□ 1.3
SYNGAP1-206ENST00000479510 RFKQ969G6 155 aa23.15■■□□□ 1.3
SYNGAP1-206ENST00000479510 TEX12Q9BXU0 123 aa23.15■■□□□ 1.3
SYNGAP1-206ENST00000479510 TRIM45Q9H8W5 580 aaPredicted RBP23.15■■□□□ 1.3
SYNGAP1-206ENST00000479510 ABCB9Q9NP78 766 aa23.15■■□□□ 1.3
SYNGAP1-206ENST00000479510 GIMAP4Q9NUV9 329 aa23.15■■□□□ 1.3
SYNGAP1-206ENST00000479510 A0A0G2JN53 185 aa23.14■■□□□ 1.29
SYNGAP1-206ENST00000479510 A0A1W2PQ09 198 aa23.14■■□□□ 1.29
SYNGAP1-206ENST00000479510 A0A1W2PR48 441 aa23.14■■□□□ 1.29
SYNGAP1-206ENST00000479510 OTOL1A6NHN0 477 aaPredicted RBP23.14■■□□□ 1.29
SYNGAP1-206ENST00000479510 PRKAG1P54619 331 aa23.14■■□□□ 1.29
SYNGAP1-206ENST00000479510 ST3GAL3Q11203 375 aa23.14■■□□□ 1.29
SYNGAP1-206ENST00000479510 HYAL2Q12891 473 aa23.14■■□□□ 1.29
SYNGAP1-206ENST00000479510 PDGFRLQ15198 375 aa23.14■■□□□ 1.29
SYNGAP1-206ENST00000479510 CEBPEQ15744 281 aa23.14■■□□□ 1.29
SYNGAP1-206ENST00000479510 FLYWCH1Q4VC44 716 aa23.14■■□□□ 1.29
SYNGAP1-206ENST00000479510 C22orf42Q6IC83 251 aa23.14■■□□□ 1.29
SYNGAP1-206ENST00000479510 FAM131AQ6UXB0 335 aa23.14■■□□□ 1.29
SYNGAP1-206ENST00000479510 CACTIN-AS1Q8N1I8 211 aa23.14■■□□□ 1.29
SYNGAP1-206ENST00000479510 ACOT4Q8N9L9 421 aa23.14■■□□□ 1.29
SYNGAP1-206ENST00000479510 CNRIP1Q96F85 164 aaPredicted RBP23.14■■□□□ 1.29
SYNGAP1-206ENST00000479510 MIXL1Q9H2W2 232 aa23.14■■□□□ 1.29
SYNGAP1-206ENST00000479510 KLHL31Q9H511 634 aa23.14■■□□□ 1.29
SYNGAP1-206ENST00000479510 RMI1Q9H9A7 625 aa23.14■■□□□ 1.29
SYNGAP1-206ENST00000479510 MRPS30Q9NP92 439 aaKnown RBP23.14■■□□□ 1.29
SYNGAP1-206ENST00000479510 MED17Q9NVC6 651 aa23.14■■□□□ 1.29
SYNGAP1-206ENST00000479510 CES1P1Q9UKY3 287 aa23.14■■□□□ 1.29
SYNGAP1-206ENST00000479510 PPM1DO15297 605 aa23.13■■□□□ 1.29
SYNGAP1-206ENST00000479510 ERI3O43414 337 aaKnown RBP23.13■■□□□ 1.29
SYNGAP1-206ENST00000479510 FAM78AQ5JUQ0 283 aa23.13■■□□□ 1.29
SYNGAP1-206ENST00000479510 SLC48A1Q6P1K1 146 aa23.13■■□□□ 1.29
SYNGAP1-206ENST00000479510 ANKK1Q8NFD2 765 aa23.13■■□□□ 1.29
SYNGAP1-206ENST00000479510 ZFYVE19Q96K21 471 aa23.13■■□□□ 1.29
SYNGAP1-206ENST00000479510 PLA2G12AQ9BZM1 189 aa23.13■■□□□ 1.29
SYNGAP1-206ENST00000479510 TPK1Q9H3S4 243 aa23.13■■□□□ 1.29
SYNGAP1-206ENST00000479510 ANKRA2Q9H9E1 313 aa23.13■■□□□ 1.29
SYNGAP1-206ENST00000479510 PHPT1Q9NRX4 125 aaPredicted RBP23.13■■□□□ 1.29
SYNGAP1-206ENST00000479510 SNX7Q9UNH6 387 aa23.13■■□□□ 1.29
SYNGAP1-206ENST00000479510 A0A1W2PQL4 384 aaPredicted RBP23.13■■□□□ 1.29
SYNGAP1-206ENST00000479510 TBC1D3BA6NDS4 549 aa23.13■■□□□ 1.29
SYNGAP1-206ENST00000479510 FAM170BA6NMN3 283 aa23.13■■□□□ 1.29
SYNGAP1-206ENST00000479510 ERAL1O75616 437 aaKnown RBP23.13■■□□□ 1.29
SYNGAP1-206ENST00000479510 ALPPP05187 535 aa23.13■■□□□ 1.29
SYNGAP1-206ENST00000479510 MPIP34949 423 aa23.13■■□□□ 1.29
SYNGAP1-206ENST00000479510 DRD3P35462 400 aa23.13■■□□□ 1.29
SYNGAP1-206ENST00000479510 STAT5AP42229 794 aa23.13■■□□□ 1.29
SYNGAP1-206ENST00000479510 NR4A2P43354 598 aa23.13■■□□□ 1.29
SYNGAP1-206ENST00000479510 IFITM2Q01629 132 aa23.13■■□□□ 1.29
SYNGAP1-206ENST00000479510 ZNF311Q5JNZ3 666 aa23.13■■□□□ 1.29
SYNGAP1-206ENST00000479510 TOR1AIP2Q8NFQ8 470 aa23.13■■□□□ 1.29
SYNGAP1-206ENST00000479510 PIGXQ8TBF5 258 aa23.13■■□□□ 1.29
SYNGAP1-206ENST00000479510 SMG7Q92540 1137 aaKnown RBP23.13■■□□□ 1.29
SYNGAP1-206ENST00000479510 DIO2Q92813 273 aa23.13■■□□□ 1.29
SYNGAP1-206ENST00000479510 OSTF1Q92882 214 aa23.13■■□□□ 1.29
SYNGAP1-206ENST00000479510 ASB16Q96NS5 453 aa23.13■■□□□ 1.29
SYNGAP1-206ENST00000479510 ARHGAP9Q9BRR9 750 aa23.13■■□□□ 1.29
SYNGAP1-206ENST00000479510 ATG4BQ9Y4P1 393 aa23.13■■□□□ 1.29
SYNGAP1-206ENST00000479510 TRDV1A0A1B0GX56 115 aa23.12■■□□□ 1.29
SYNGAP1-206ENST00000479510 FAM172BPA6NC97 362 aa23.12■■□□□ 1.29
SYNGAP1-206ENST00000479510 FABP12A6NFH5 140 aa23.12■■□□□ 1.29
SYNGAP1-206ENST00000479510 PRICKLE3O43900 615 aaPredicted RBP23.12■■□□□ 1.29
SYNGAP1-206ENST00000479510 AIFM1O95831 613 aa23.12■■□□□ 1.29
SYNGAP1-206ENST00000479510 PRKAR1BP31321 381 aa23.12■■□□□ 1.29
SYNGAP1-206ENST00000479510 ZMAT1Q5H9K5 638 aa23.12■■□□□ 1.29
SYNGAP1-206ENST00000479510 ATAD3CQ5T2N8 411 aa23.12■■□□□ 1.29
SYNGAP1-206ENST00000479510 ZNF730Q6ZMV8 503 aa23.12■■□□□ 1.29
SYNGAP1-206ENST00000479510 SMARCD2Q92925 531 aa23.12■■□□□ 1.29
SYNGAP1-206ENST00000479510 C1GALT1C1Q96EU7 318 aa23.12■■□□□ 1.29
SYNGAP1-206ENST00000479510 OR7D2Q96RA2 312 aa23.12■■□□□ 1.29
SYNGAP1-206ENST00000479510 SLC38A1Q9H2H9 487 aa23.12■■□□□ 1.29
SYNGAP1-206ENST00000479510 HMX3A6NHT5 357 aa23.12■■□□□ 1.29
SYNGAP1-206ENST00000479510 PGRMC2O15173 223 aa23.12■■□□□ 1.29
SYNGAP1-206ENST00000479510 ACP5P13686 325 aa23.12■■□□□ 1.29
SYNGAP1-206ENST00000479510 F3P13726 295 aa23.12■■□□□ 1.29
SYNGAP1-206ENST00000479510 PTBP1P26599 531 aaKnown RBP eCLIP23.12■■□□□ 1.293e-8■■■■□ 26.5
SYNGAP1-206ENST00000479510 SDC2P34741 201 aa23.12■■□□□ 1.29
SYNGAP1-206ENST00000479510 MXD1Q05195 221 aa23.12■■□□□ 1.29
SYNGAP1-206ENST00000479510 TGM3Q08188 693 aa23.12■■□□□ 1.29
SYNGAP1-206ENST00000479510 ACSM1Q08AH1 577 aa23.12■■□□□ 1.29
SYNGAP1-206ENST00000479510 PDZK1Q5T2W1 519 aa23.12■■□□□ 1.29
SYNGAP1-206ENST00000479510 AGBL4Q5VU57 503 aa23.12■■□□□ 1.29
SYNGAP1-206ENST00000479510 NXNL2Q5VZ03 156 aa23.12■■□□□ 1.29
SYNGAP1-206ENST00000479510 SFTPA1Q8IWL2 248 aa23.12■■□□□ 1.29
SYNGAP1-206ENST00000479510 POGLUT1Q8NBL1 392 aa23.12■■□□□ 1.29
SYNGAP1-206ENST00000479510 ZNF485Q8NCK3 441 aa23.12■■□□□ 1.29
SYNGAP1-206ENST00000479510 OR8K5Q8NH50 307 aa23.12■■□□□ 1.29
SYNGAP1-206ENST00000479510 TM9SF4Q92544 642 aa23.12■■□□□ 1.29
SYNGAP1-206ENST00000479510 DIRAS2Q96HU8 199 aa23.12■■□□□ 1.29
SYNGAP1-206ENST00000479510 NEDD4LQ96PU5 975 aa23.12■■□□□ 1.29
SYNGAP1-206ENST00000479510 EGLN3Q9H6Z9 239 aa23.12■■□□□ 1.29
SYNGAP1-206ENST00000479510 KLHL28Q9NXS3 571 aa23.12■■□□□ 1.29
SYNGAP1-206ENST00000479510 OBP2AQ9NY56 170 aa23.12■■□□□ 1.29
SYNGAP1-206ENST00000479510 CARD8Q9Y2G2 431 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms