RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 H0YIG0 161 aa4.23□□□□□ -1.73
RFC4-212ENST00000479307 DDX39AO00148 427 aaKnown RBP4.23□□□□□ -1.73
RFC4-212ENST00000479307 CACNB4O00305 520 aaPredicted RBP4.23□□□□□ -1.73
RFC4-212ENST00000479307 SOCS5O75159 536 aa4.23□□□□□ -1.73
RFC4-212ENST00000479307 RDXP35241 583 aaKnown RBP4.23□□□□□ -1.73
RFC4-212ENST00000479307 OPRL1P41146 370 aa4.23□□□□□ -1.73
RFC4-212ENST00000479307 SERPINH1P50454 418 aaKnown RBP4.23□□□□□ -1.73
RFC4-212ENST00000479307 CSRP3P50461 194 aa4.23□□□□□ -1.73
RFC4-212ENST00000479307 C17orf67Q0P5P2 114 aa4.23□□□□□ -1.73
RFC4-212ENST00000479307 ZKSCAN8Q15776 578 aaPredicted RBP4.23□□□□□ -1.73
RFC4-212ENST00000479307 KRTAP21-3Q3LHN1 58 aa4.23□□□□□ -1.73
RFC4-212ENST00000479307 SBK1Q52WX2 424 aa4.23□□□□□ -1.73
RFC4-212ENST00000479307 MARCH8Q5T0T0 291 aa4.23□□□□□ -1.73
RFC4-212ENST00000479307 OTUD3Q5T2D3 398 aaPredicted RBP4.23□□□□□ -1.73
RFC4-212ENST00000479307 PRAMEF8Q5VWM4 474 aa4.23□□□□□ -1.73
RFC4-212ENST00000479307 SIGLEC15Q6ZMC9 328 aa4.23□□□□□ -1.73
RFC4-212ENST00000479307 ASPGQ86U10 573 aa4.23□□□□□ -1.73
RFC4-212ENST00000479307 LAX1Q8IWV1 398 aa4.23□□□□□ -1.73
RFC4-212ENST00000479307 ZNF614Q8N883 585 aa4.23□□□□□ -1.73
RFC4-212ENST00000479307 SMYD1Q8NB12 490 aa4.23□□□□□ -1.73
RFC4-212ENST00000479307 KRT35Q92764 455 aa4.23□□□□□ -1.73
RFC4-212ENST00000479307 SLCO2A1Q92959 643 aa4.23□□□□□ -1.73
RFC4-212ENST00000479307 TAAR1Q96RJ0 339 aa4.23□□□□□ -1.73
RFC4-212ENST00000479307 CCM2Q9BSQ5 444 aa4.23□□□□□ -1.73
RFC4-212ENST00000479307 DGCR6LQ9BY27 220 aa4.23□□□□□ -1.73
RFC4-212ENST00000479307 LRRC2Q9BYS8 371 aa4.23□□□□□ -1.73
RFC4-212ENST00000479307 OSBPL8Q9BZF1 889 aa4.23□□□□□ -1.73
RFC4-212ENST00000479307 HEBP1Q9NRV9 189 aa4.23□□□□□ -1.73
RFC4-212ENST00000479307 COMMD8Q9NX08 183 aa4.23□□□□□ -1.73
RFC4-212ENST00000479307 POMT2Q9UKY4 750 aa4.23□□□□□ -1.73
RFC4-212ENST00000479307 EXOGQ9Y2C4 368 aaKnown RBP4.23□□□□□ -1.73
RFC4-212ENST00000479307 ZNF510Q9Y2H8 683 aa4.23□□□□□ -1.73
RFC4-212ENST00000479307 CREBBPQ92793 2442 aa4.23□□□□□ -1.73
RFC4-212ENST00000479307 LRBAP50851 2863 aa4.23□□□□□ -1.73
RFC4-212ENST00000479307 UTP20O75691 2785 aaKnown RBP4.22□□□□□ -1.73
RFC4-212ENST00000479307 A0A0A6YYC8 382 aaPredicted RBP4.22□□□□□ -1.73
RFC4-212ENST00000479307 CCDC162PA2VCL2 907 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 SMIM30A4D0T7 59 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 GTPBP10A4D1E9 387 aaKnown RBP4.22□□□□□ -1.73
RFC4-212ENST00000479307 SERINC4A6NH21 518 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 ZNF732B4DXR9 585 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 I3L1I5 382 aaPredicted RBP4.22□□□□□ -1.73
RFC4-212ENST00000479307 M0QZ92 97 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 RNF103O00237 685 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 ZG16O60844 167 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 CLDN1O95832 211 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 HLA-DPA1P20036 260 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 C4BPBP20851 252 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 GIFP27352 417 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 NME5P56597 212 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 CNTN1Q12860 1018 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 NPRL3Q12980 569 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 RPA4Q13156 261 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 GPR50Q13585 617 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 TMEM187Q14656 261 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 MAPK11Q15759 364 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 SGCBQ16585 318 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 IFI44LQ53G44 452 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 CLLU1OSQ5K130 101 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 ZNF776Q68DI1 518 aaPredicted RBP4.22□□□□□ -1.73
RFC4-212ENST00000479307 FRRS1Q6ZNA5 592 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 Q6ZRP5 223 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 PRSS42Q7Z5A4 293 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 C5orf24Q7Z6I8 188 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 CATSPERDQ86XM0 798 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 TMEM126BQ8IUX1 230 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 ZC3H3Q8IXZ2 948 aaKnown RBP4.22□□□□□ -1.73
RFC4-212ENST00000479307 CARNMT1Q8N4J0 409 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 OR2T6Q8NHC8 308 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 GGHQ92820 318 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 ULK4Q96C45 1275 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 EEF2KMTQ96G04 330 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 C5orf30Q96GV9 206 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 NSMCE3Q96MG7 304 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 FAM218AQ96MZ4 157 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 OPRPNQ99935 248 aaPredicted RBP4.22□□□□□ -1.73
RFC4-212ENST00000479307 OVOL2Q9BRP0 275 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 ACPTQ9BZG2 426 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 WWTR1Q9GZV5 400 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 NT5C3AQ9H0P0 336 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 TSPYL1Q9H0U9 437 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 MAGEF1Q9HAY2 307 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 PXMP2Q9NR77 195 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 RBM28Q9NW13 759 aaKnown RBP4.22□□□□□ -1.73
RFC4-212ENST00000479307 MDFICQ9P1T7 246 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 ANKMY1Q9P2S6 941 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 NDRG2Q9UN36 371 aaKnown RBP4.22□□□□□ -1.73
RFC4-212ENST00000479307 TMED7Q9Y3B3 224 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 WIPI2Q9Y4P8 454 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 SNX5Q9Y5X3 404 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 VWA8A3KMH1 1905 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 ITPR2Q14571 2701 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 NF1P21359 2839 aa4.22□□□□□ -1.73
RFC4-212ENST00000479307 ABCB11O95342 1321 aa4.21□□□□□ -1.73
RFC4-212ENST00000479307 USP9YO00507 2555 aaPredicted RBP4.21□□□□□ -1.73
RFC4-212ENST00000479307 TMEM129A0AVI4 362 aa4.21□□□□□ -1.74
RFC4-212ENST00000479307 BCLAF3A2AJT9 711 aaKnown RBP4.21□□□□□ -1.74
RFC4-212ENST00000479307 TRIM64A6NGJ6 449 aa4.21□□□□□ -1.74
RFC4-212ENST00000479307 TRIM64BA6NI03 449 aa4.21□□□□□ -1.74
RFC4-212ENST00000479307 MAGEB2O15479 319 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms