RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 LIASO43766 372 aa6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 PRAMEF4O60810 478 aa6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 UGT2B11O75310 529 aa6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 GCM2O75603 506 aaPredicted RBP6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 GPR75O95800 540 aa6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 ALDOAP04075 364 aaKnown RBP6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 ENO2P09104 434 aaPredicted RBP6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 CSF3P09919 207 aa6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 APEHP13798 732 aaKnown RBP6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 PCSK2P16519 638 aa6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 GNAZP19086 355 aa6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 HIST1H1TP22492 207 aaPredicted RBP6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 DEKP35659 375 aaKnown RBP6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 SRP14P37108 136 aaKnown RBP6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 SLC1A2P43004 574 aa6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 NR4A2P43354 598 aa6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 EFNA4P52798 201 aa6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 HMGCS1Q01581 520 aa6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 TGM3Q08188 693 aa6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 GGTLC2Q14390 218 aa6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 AWAT1Q58HT5 328 aa6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 PRAMEF9Q5VWM5 478 aa6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 ARMC3Q5W041 872 aa6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 HLA-DQA1Q5Y7H0 255 aa6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 C18orf63Q68DL7 685 aa6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 VASH1Q7L8A9 365 aaPredicted RBP6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 KRT78Q8N1N4 520 aa6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 METTL25Q8N6Q8 603 aa6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 SRFBP1Q8NEF9 429 aaKnown RBP6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 VPS39Q96JC1 886 aa6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 HBEGFQ99075 208 aa6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 PELOQ9BRX2 385 aaKnown RBP6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 ZNF747Q9BV97 191 aa6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 TRIM54Q9BYV2 358 aa6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 NXF5Q9H1B4 397 aaKnown RBP6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 CXorf21Q9HAI6 301 aa6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 CBLN4Q9NTU7 201 aa6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 ABHD10Q9NUJ1 306 aa6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 MS4A12Q9NXJ0 267 aa6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 MOCS1Q9NZB8 636 aa6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 KLRF1Q9NZS2 232 aa6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 PAK5Q9P286 719 aa6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 TMEFF2Q9UIK5 374 aaPredicted RBP6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 IKZF3Q9UKT9 509 aa6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 EMC9Q9Y3B6 208 aa6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 ZNF337Q9Y3M9 751 aa6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 SPACA6W5XKT8 324 aa6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 PRAMEF25A6NGN4 478 aa6.51□□□□□ -1.37
SPTLC1-205ENST00000477888 SS18L1O75177 396 aaPredicted RBP6.51□□□□□ -1.37
SPTLC1-205ENST00000477888 PRKRAO75569 313 aaKnown RBP6.51□□□□□ -1.37
SPTLC1-205ENST00000477888 LY6HO94772 140 aa6.51□□□□□ -1.37
SPTLC1-205ENST00000477888 PTMAP06454 111 aaKnown RBP6.51□□□□□ -1.37
SPTLC1-205ENST00000477888 CT62P0C5K7 136 aa6.51□□□□□ -1.37
SPTLC1-205ENST00000477888 SLC35E2BP0CK96 405 aa6.51□□□□□ -1.37
SPTLC1-205ENST00000477888 SLC35E2P0CK97 266 aa6.51□□□□□ -1.37
SPTLC1-205ENST00000477888 KRT15P19012 456 aa6.51□□□□□ -1.37
SPTLC1-205ENST00000477888 GPX3P22352 226 aa6.51□□□□□ -1.37
SPTLC1-205ENST00000477888 TCEA1P23193 301 aaKnown RBP6.51□□□□□ -1.37
SPTLC1-205ENST00000477888 CNTFP26441 200 aa6.51□□□□□ -1.37
SPTLC1-205ENST00000477888 GDF5P43026 501 aa6.51□□□□□ -1.37
SPTLC1-205ENST00000477888 SLC6A8P48029 635 aa6.51□□□□□ -1.37
SPTLC1-205ENST00000477888 NEK2P51955 445 aa6.51□□□□□ -1.37
SPTLC1-205ENST00000477888 CDKN2DP55273 166 aa6.51□□□□□ -1.37
SPTLC1-205ENST00000477888 CLDN20P56880 219 aa6.51□□□□□ -1.37
SPTLC1-205ENST00000477888 IL2P60568 153 aa6.51□□□□□ -1.37
SPTLC1-205ENST00000477888 PSMA6P60900 246 aaKnown RBP6.51□□□□□ -1.37
SPTLC1-205ENST00000477888 IRF9Q00978 393 aa6.51□□□□□ -1.37
SPTLC1-205ENST00000477888 SLAMF1Q13291 335 aa6.51□□□□□ -1.37
SPTLC1-205ENST00000477888 THOC5Q13769 683 aaKnown RBP6.51□□□□□ -1.37
SPTLC1-205ENST00000477888 DHX34Q14147 1143 aaKnown RBP6.51□□□□□ -1.37
SPTLC1-205ENST00000477888 DOC2AQ14183 400 aa6.51□□□□□ -1.37
SPTLC1-205ENST00000477888 TSC22D1Q15714 1073 aa6.51□□□□□ -1.37
SPTLC1-205ENST00000477888 PPP1R3AQ16821 1122 aa6.51□□□□□ -1.37
SPTLC1-205ENST00000477888 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.51□□□□□ -1.37
SPTLC1-205ENST00000477888 OR5M10Q6IEU7 315 aa6.51□□□□□ -1.37
SPTLC1-205ENST00000477888 FIGNL1Q6PIW4 674 aa6.51□□□□□ -1.37
SPTLC1-205ENST00000477888 SHISA2Q6UWI4 295 aa6.51□□□□□ -1.37
SPTLC1-205ENST00000477888 DEF8Q6ZN54 512 aa6.51□□□□□ -1.37
SPTLC1-205ENST00000477888 GPR180Q86V85 440 aa6.51□□□□□ -1.37
SPTLC1-205ENST00000477888 EXOC3L1Q86VI1 746 aa6.51□□□□□ -1.37
SPTLC1-205ENST00000477888 GABRG1Q8N1C3 465 aa6.51□□□□□ -1.37
SPTLC1-205ENST00000477888 GMPPAQ96IJ6 420 aaPredicted RBP6.51□□□□□ -1.37
SPTLC1-205ENST00000477888 TSGA10Q9BZW7 698 aa6.51□□□□□ -1.37
SPTLC1-205ENST00000477888 OR10A5Q9H207 317 aa6.51□□□□□ -1.37
SPTLC1-205ENST00000477888 PIF1Q9H611 641 aa6.51□□□□□ -1.37
SPTLC1-205ENST00000477888 TAS2R13Q9NYV9 303 aa6.51□□□□□ -1.37
SPTLC1-205ENST00000477888 DKKL1Q9UK85 242 aa6.51□□□□□ -1.37
SPTLC1-205ENST00000477888 FBXO5Q9UKT4 447 aa6.51□□□□□ -1.37
SPTLC1-205ENST00000477888 CLEC4AQ9UMR7 237 aa6.51□□□□□ -1.37
SPTLC1-205ENST00000477888 PCDHGB1Q9Y5G3 927 aa6.51□□□□□ -1.37
SPTLC1-205ENST00000477888 GOLGA8QA0A0J9YX86 632 aa6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 A0A1W2PS29 197 aa6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 TCRBV7S3A2A0A539 114 aa6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 SYCE3A1L190 88 aa6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 GOLGA8OA6NCC3 632 aa6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 PABPN1LA6NDY0 278 aaKnown RBP6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 E7EQL1 145 aa6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 GOLGA8NF8WBI6 632 aa6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 GOLGA8RI6L899 631 aa6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 NDUFS8O00217 210 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms